RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 CCDC47Q96A33 483 aaKnown RBP6.9□□□□□ -1.31
VCAM1-201ENST00000294728 NUP88Q99567 741 aaPredicted RBP6.9□□□□□ -1.31
VCAM1-201ENST00000294728 IRX2Q9BZI1 471 aaPredicted RBP6.9□□□□□ -1.31
VCAM1-201ENST00000294728 NUCKS1Q9H1E3 243 aaKnown RBP6.9□□□□□ -1.31
VCAM1-201ENST00000294728 INCENPQ9NQS7 918 aa6.9□□□□□ -1.31
VCAM1-201ENST00000294728 CREBZFQ9NS37 354 aa6.9□□□□□ -1.31
VCAM1-201ENST00000294728 EXOC1Q9NV70 894 aa6.9□□□□□ -1.31
VCAM1-201ENST00000294728 PODXL2Q9NZ53 605 aa6.9□□□□□ -1.31
VCAM1-201ENST00000294728 HPCAL4Q9UM19 191 aa6.9□□□□□ -1.31
VCAM1-201ENST00000294728 JRKLQ9Y4A0 524 aa6.9□□□□□ -1.31
VCAM1-201ENST00000294728 ANKRD31Q8N7Z5 1873 aa6.89□□□□□ -1.31
VCAM1-201ENST00000294728 COL4A1P02462 1669 aa6.89□□□□□ -1.31
VCAM1-201ENST00000294728 A0A0U1RQG5 324 aaPredicted RBP6.89□□□□□ -1.31
VCAM1-201ENST00000294728 TTC26A0AVF1 554 aa6.89□□□□□ -1.31
VCAM1-201ENST00000294728 RBAK-RBAKDNI3L0D1 243 aa6.89□□□□□ -1.31
VCAM1-201ENST00000294728 POLR3GO15318 223 aaPredicted RBP6.89□□□□□ -1.31
VCAM1-201ENST00000294728 SYF2O95926 243 aaKnown RBP6.89□□□□□ -1.31
VCAM1-201ENST00000294728 VAV2P52735 878 aa6.89□□□□□ -1.31
VCAM1-201ENST00000294728 SEPT2Q15019 361 aa6.89□□□□□ -1.31
VCAM1-201ENST00000294728 ALS2CLQ60I27 953 aa6.89□□□□□ -1.31
VCAM1-201ENST00000294728 CCNI2Q6ZMN8 369 aaPredicted RBP6.89□□□□□ -1.31
VCAM1-201ENST00000294728 SPATS2Q86XZ4 545 aaKnown RBP6.89□□□□□ -1.31
VCAM1-201ENST00000294728 RNF10Q8N5U6 811 aaKnown RBP6.89□□□□□ -1.31
VCAM1-201ENST00000294728 CAVIN3Q969G5 261 aa6.89□□□□□ -1.31
VCAM1-201ENST00000294728 PLAGL2Q9UPG8 496 aa6.89□□□□□ -1.31
VCAM1-201ENST00000294728 ZNF652Q9Y2D9 606 aa6.89□□□□□ -1.31
VCAM1-201ENST00000294728 IRS2Q9Y4H2 1338 aa6.89□□□□□ -1.31
VCAM1-201ENST00000294728 MYH7BA7E2Y1 1941 aa6.89□□□□□ -1.31
VCAM1-201ENST00000294728 PVALEFA0A1B0GWK0 134 aa6.89□□□□□ -1.31
VCAM1-201ENST00000294728 ERICH4A6NGS2 130 aa6.89□□□□□ -1.31
VCAM1-201ENST00000294728 MYO1CO00159 1063 aa6.89□□□□□ -1.31
VCAM1-201ENST00000294728 PLEKHA8P1O95397 391 aa6.89□□□□□ -1.31
VCAM1-201ENST00000294728 FGFR1OPO95684 399 aaKnown RBP6.89□□□□□ -1.31
VCAM1-201ENST00000294728 AFMP43652 599 aa6.89□□□□□ -1.31
VCAM1-201ENST00000294728 BCAMP50895 628 aa6.89□□□□□ -1.31
VCAM1-201ENST00000294728 CORO7P57737 925 aa6.89□□□□□ -1.31
VCAM1-201ENST00000294728 AMPD3Q01432 767 aa6.89□□□□□ -1.31
VCAM1-201ENST00000294728 RASSF7Q02833 373 aa6.89□□□□□ -1.31
VCAM1-201ENST00000294728 UBXN1Q04323 297 aa6.89□□□□□ -1.31
VCAM1-201ENST00000294728 MAPK8IP2Q13387 824 aaPredicted RBP6.89□□□□□ -1.31
VCAM1-201ENST00000294728 RCSD1Q6JBY9 416 aa6.89□□□□□ -1.31
VCAM1-201ENST00000294728 CCDC70Q6NSX1 233 aa6.89□□□□□ -1.31
VCAM1-201ENST00000294728 C15orf52Q6ZUT6 534 aaKnown RBP6.89□□□□□ -1.31
VCAM1-201ENST00000294728 ADGRA1Q86SQ6 560 aa6.89□□□□□ -1.31
VCAM1-201ENST00000294728 GOLGA6L1Q8N7Z2 621 aa6.89□□□□□ -1.31
VCAM1-201ENST00000294728 ACRBPQ8NEB7 543 aa6.89□□□□□ -1.31
VCAM1-201ENST00000294728 NEK11Q8NG66 645 aa6.89□□□□□ -1.31
VCAM1-201ENST00000294728 SPZ1Q9BXG8 430 aa6.89□□□□□ -1.31
VCAM1-201ENST00000294728 CRNKL1Q9BZJ0 848 aaKnown RBP6.89□□□□□ -1.31
VCAM1-201ENST00000294728 GGA2Q9UJY4 613 aa6.89□□□□□ -1.31
VCAM1-201ENST00000294728 FAM184BQ9ULE4 1060 aa6.89□□□□□ -1.31
VCAM1-201ENST00000294728 FLT1P17948 1338 aa6.89□□□□□ -1.31
VCAM1-201ENST00000294728 COL11A2P13942 1736 aaPredicted RBP6.89□□□□□ -1.31
VCAM1-201ENST00000294728 CNTNAP1P78357 1384 aa6.89□□□□□ -1.31
VCAM1-201ENST00000294728 SCN4AP35499 1836 aa6.89□□□□□ -1.31
VCAM1-201ENST00000294728 SSU72P8A0A1W2PR75 194 aa6.88□□□□□ -1.31
VCAM1-201ENST00000294728 BTNL10A8MVZ5 291 aa6.88□□□□□ -1.31
VCAM1-201ENST00000294728 TCP1P17987 556 aaKnown RBP6.88□□□□□ -1.31
VCAM1-201ENST00000294728 GPTP24298 496 aa6.88□□□□□ -1.31
VCAM1-201ENST00000294728 CHRNA5P30532 468 aa6.88□□□□□ -1.31
VCAM1-201ENST00000294728 STAT6P42226 847 aa6.88□□□□□ -1.31
VCAM1-201ENST00000294728 CRKLP46109 303 aaKnown RBP6.88□□□□□ -1.31
VCAM1-201ENST00000294728 SKOR1P84550 965 aa6.88□□□□□ -1.31
VCAM1-201ENST00000294728 PSMD2Q13200 908 aa6.88□□□□□ -1.31
VCAM1-201ENST00000294728 CAVIN4Q5BKX8 364 aa6.88□□□□□ -1.31
VCAM1-201ENST00000294728 CENPPQ6IPU0 288 aa6.88□□□□□ -1.31
VCAM1-201ENST00000294728 EMBQ6PCB8 327 aa6.88□□□□□ -1.31
VCAM1-201ENST00000294728 DTHD1Q6ZMT9 781 aa6.88□□□□□ -1.31
VCAM1-201ENST00000294728 CCDC84Q86UT8 332 aaPredicted RBP6.88□□□□□ -1.31
VCAM1-201ENST00000294728 MREGQ8N565 214 aa6.88□□□□□ -1.31
VCAM1-201ENST00000294728 NUP133Q8WUM0 1156 aa6.88□□□□□ -1.31
VCAM1-201ENST00000294728 NSUN4Q96CB9 384 aaKnown RBP6.88□□□□□ -1.31
VCAM1-201ENST00000294728 LRRC27Q9C0I9 530 aa6.88□□□□□ -1.31
VCAM1-201ENST00000294728 ZCCHC17Q9NP64 241 aaKnown RBP6.88□□□□□ -1.31
VCAM1-201ENST00000294728 PCDH10Q9P2E7 1040 aa6.88□□□□□ -1.31
VCAM1-201ENST00000294728 MAGEC2Q9UBF1 373 aaPredicted RBP6.88□□□□□ -1.31
VCAM1-201ENST00000294728 STK17AQ9UEE5 414 aa6.88□□□□□ -1.31
VCAM1-201ENST00000294728 RRP15Q9Y3B9 282 aaKnown RBP6.88□□□□□ -1.31
VCAM1-201ENST00000294728 GREB1LQ9C091 1923 aaPredicted RBP6.88□□□□□ -1.31
VCAM1-201ENST00000294728 FAM205CA6NFA0 338 aa6.88□□□□□ -1.31
VCAM1-201ENST00000294728 LRRIQ3A6PVS8 624 aaPredicted RBP6.88□□□□□ -1.31
VCAM1-201ENST00000294728 GOLGA8KD6RF30 607 aa6.88□□□□□ -1.31
VCAM1-201ENST00000294728 RNF225M0QZC1 329 aaPredicted RBP6.88□□□□□ -1.31
VCAM1-201ENST00000294728 WNT7AO00755 349 aa6.88□□□□□ -1.31
VCAM1-201ENST00000294728 ANXA13P27216 316 aa6.88□□□□□ -1.31
VCAM1-201ENST00000294728 NLRP5P59047 1200 aa6.88□□□□□ -1.31
VCAM1-201ENST00000294728 PPP4CP60510 307 aa6.88□□□□□ -1.31
VCAM1-201ENST00000294728 ZNF174Q15697 407 aa6.88□□□□□ -1.31
VCAM1-201ENST00000294728 SPTY2D1Q68D10 685 aaPredicted RBP6.88□□□□□ -1.31
VCAM1-201ENST00000294728 CD302Q8IX05 232 aa6.88□□□□□ -1.31
VCAM1-201ENST00000294728 EFCAB13Q8IY85 973 aa6.88□□□□□ -1.31
VCAM1-201ENST00000294728 NOA1Q8NC60 698 aaKnown RBP6.88□□□□□ -1.31
VCAM1-201ENST00000294728 P2RX5Q93086 422 aa6.88□□□□□ -1.31
VCAM1-201ENST00000294728 DUSP9Q99956 384 aaKnown RBP6.88□□□□□ -1.31
VCAM1-201ENST00000294728 ANKRD2Q9GZV1 360 aa6.88□□□□□ -1.31
VCAM1-201ENST00000294728 ZMYND12Q9H0C1 365 aa6.88□□□□□ -1.31
VCAM1-201ENST00000294728 EPC1Q9H2F5 836 aa6.88□□□□□ -1.31
VCAM1-201ENST00000294728 BARHL2Q9NY43 387 aa6.88□□□□□ -1.31
VCAM1-201ENST00000294728 VPS18Q9P253 973 aa6.88□□□□□ -1.31
VCAM1-201ENST00000294728 TAOK2Q9UL54 1235 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms