RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 NR2E3Q9Y5X4 410 aa23.79■■□□□ 1.4
RAB28-201ENST00000288723 BAZ2BQ9UIF8 2168 aaKnown RBP23.79■■□□□ 1.4
RAB28-201ENST00000288723 PTGS1P23219 599 aa23.78■■□□□ 1.4
RAB28-201ENST00000288723 ADCYAP1R1P41586 468 aa23.78■■□□□ 1.4
RAB28-201ENST00000288723 KRT32Q14532 448 aa23.78■■□□□ 1.4
RAB28-201ENST00000288723 CMTR1Q8N1G2 835 aaKnown RBP23.78■■□□□ 1.4
RAB28-201ENST00000288723 RGS22Q8NE09 1264 aa23.78■■□□□ 1.4
RAB28-201ENST00000288723 PCDH10Q9P2E7 1040 aa23.78■■□□□ 1.4
RAB28-201ENST00000288723 SNX14Q9Y5W7 946 aa23.78■■□□□ 1.4
RAB28-201ENST00000288723 SLC12A7Q9Y666 1083 aa23.78■■□□□ 1.4
RAB28-201ENST00000288723 SYNRGQ9UMZ2 1314 aa23.78■■□□□ 1.4
RAB28-201ENST00000288723 ADAMTS4O75173 837 aa23.77■■□□□ 1.4
RAB28-201ENST00000288723 TMEM63BQ5T3F8 832 aa23.77■■□□□ 1.4
RAB28-201ENST00000288723 RNF180Q86T96 592 aa23.77■■□□□ 1.4
RAB28-201ENST00000288723 MORC4Q8TE76 937 aa23.77■■□□□ 1.4
RAB28-201ENST00000288723 KCNB2Q92953 911 aa23.77■■□□□ 1.4
RAB28-201ENST00000288723 MAP3K14Q99558 947 aa23.77■■□□□ 1.4
RAB28-201ENST00000288723 MYH6P13533 1939 aa23.77■■□□□ 1.4
RAB28-201ENST00000288723 MYADML2A6NDP7 307 aa23.77■■□□□ 1.4
RAB28-201ENST00000288723 OPLAHO14841 1288 aa23.77■■□□□ 1.4
RAB28-201ENST00000288723 DUSP11O75319 330 aaKnown RBP23.77■■□□□ 1.4
RAB28-201ENST00000288723 PLEKHA8P1O95397 391 aa23.77■■□□□ 1.4
RAB28-201ENST00000288723 TAPT1Q6NXT6 567 aa23.77■■□□□ 1.4
RAB28-201ENST00000288723 NOL8Q76FK4 1167 aaKnown RBP23.77■■□□□ 1.4
RAB28-201ENST00000288723 SYTL5Q8TDW5 730 aaPredicted RBP23.77■■□□□ 1.4
RAB28-201ENST00000288723 COL20A1Q9P218 1284 aa23.77■■□□□ 1.4
RAB28-201ENST00000288723 CFBP00751 764 aa23.76■■□□□ 1.39
RAB28-201ENST00000288723 KIF5BP33176 963 aa23.76■■□□□ 1.39
RAB28-201ENST00000288723 TNFAIP2Q03169 654 aa23.76■■□□□ 1.39
RAB28-201ENST00000288723 MCF2L2Q86YR7 1114 aa23.76■■□□□ 1.39
RAB28-201ENST00000288723 JAKMIP1Q96N16 626 aaKnown RBP23.76■■□□□ 1.39
RAB28-201ENST00000288723 TAAR1Q96RJ0 339 aa23.76■■□□□ 1.39
RAB28-201ENST00000288723 PNMA6FA0A0J9YX94 578 aa23.75■■□□□ 1.39
RAB28-201ENST00000288723 SGMS1Q86VZ5 419 aa23.75■■□□□ 1.39
RAB28-201ENST00000288723 MICU3Q86XE3 530 aa23.75■■□□□ 1.39
RAB28-201ENST00000288723 SRBD1Q8N5C6 995 aaKnown RBP23.75■■□□□ 1.39
RAB28-201ENST00000288723 ZMYND8Q9ULU4 1186 aaPredicted RBP23.75■■□□□ 1.39
RAB28-201ENST00000288723 CCDC82Q8N4S0 544 aa23.75■■□□□ 1.39
RAB28-201ENST00000288723 DNERQ8NFT8 737 aa23.75■■□□□ 1.39
RAB28-201ENST00000288723 BRPF3Q9ULD4 1205 aa23.75■■□□□ 1.39
RAB28-201ENST00000288723 C6orf222P0C671 652 aaPredicted RBP23.74■■□□□ 1.39
RAB28-201ENST00000288723 CALM1P0DP23 149 aa23.74■■□□□ 1.39
RAB28-201ENST00000288723 CALM2P0DP24 149 aa23.74■■□□□ 1.39
RAB28-201ENST00000288723 CALM3P0DP25 149 aa23.74■■□□□ 1.39
RAB28-201ENST00000288723 SMPD1P17405 629 aa23.74■■□□□ 1.39
RAB28-201ENST00000288723 PDE4DQ08499 809 aa23.74■■□□□ 1.39
RAB28-201ENST00000288723 FANCBQ8NB91 859 aa23.74■■□□□ 1.39
RAB28-201ENST00000288723 VTA1Q9NP79 307 aa23.74■■□□□ 1.39
RAB28-201ENST00000288723 SYN1P17600 705 aa23.73■■□□□ 1.39
RAB28-201ENST00000288723 KCNA10Q16322 511 aa23.73■■□□□ 1.39
RAB28-201ENST00000288723 SLC39A5Q6ZMH5 540 aa23.73■■□□□ 1.39
RAB28-201ENST00000288723 KLHDC9Q8NEP7 349 aa23.73■■□□□ 1.39
RAB28-201ENST00000288723 SPZ1Q9BXG8 430 aa23.73■■□□□ 1.39
RAB28-201ENST00000288723 PHF24Q9UPV7 400 aa23.73■■□□□ 1.39
RAB28-201ENST00000288723 LRRC37A2A6NM11 1700 aa23.73■■□□□ 1.39
RAB28-201ENST00000288723 HMGB1P09429 215 aaKnown RBP23.73■■□□□ 1.39
RAB28-201ENST00000288723 HOXA13P31271 388 aaPredicted RBP23.73■■□□□ 1.39
RAB28-201ENST00000288723 APOA5Q6Q788 366 aa23.73■■□□□ 1.39
RAB28-201ENST00000288723 SYNE3Q6ZMZ3 975 aa23.73■■□□□ 1.39
RAB28-201ENST00000288723 GNEQ9Y223 722 aaKnown RBP23.73■■□□□ 1.39
RAB28-201ENST00000288723 hCG_1642624A0A1W2PR95 340 aa23.72■■□□□ 1.39
RAB28-201ENST00000288723 EDNRBP24530 442 aa23.72■■□□□ 1.39
RAB28-201ENST00000288723 GNAQP50148 359 aa23.72■■□□□ 1.39
RAB28-201ENST00000288723 GJA9P57773 515 aa23.72■■□□□ 1.39
RAB28-201ENST00000288723 IQSEC1Q6DN90 963 aa23.72■■□□□ 1.39
RAB28-201ENST00000288723 CCSAPQ6IQ19 270 aaPredicted RBP23.72■■□□□ 1.39
RAB28-201ENST00000288723 RRP36Q96EU6 259 aaKnown RBP23.72■■□□□ 1.39
RAB28-201ENST00000288723 RMDN3Q96TC7 470 aa23.72■■□□□ 1.39
RAB28-201ENST00000288723 LZTS2Q9BRK4 669 aa23.72■■□□□ 1.39
RAB28-201ENST00000288723 USP26Q9BXU7 913 aa23.72■■□□□ 1.39
RAB28-201ENST00000288723 LOC102724159A0A0B4J2E5 919 aa23.71■■□□□ 1.39
RAB28-201ENST00000288723 HSD17B4P51659 736 aa23.71■■□□□ 1.39
RAB28-201ENST00000288723 ACLYP53396 1101 aa23.71■■□□□ 1.39
RAB28-201ENST00000288723 FGD1P98174 961 aa23.71■■□□□ 1.39
RAB28-201ENST00000288723 BEX3Q00994 111 aa23.71■■□□□ 1.39
RAB28-201ENST00000288723 PWP2Q15269 919 aaKnown RBP23.71■■□□□ 1.39
RAB28-201ENST00000288723 BLOC1S2Q6QNY1 142 aa23.71■■□□□ 1.39
RAB28-201ENST00000288723 CHRDL2Q6WN34 429 aa23.71■■□□□ 1.39
RAB28-201ENST00000288723 UPF3AQ9H1J1 476 aaKnown RBP23.71■■□□□ 1.39
RAB28-201ENST00000288723 SPC25Q9HBM1 224 aa23.71■■□□□ 1.39
RAB28-201ENST00000288723 COLQQ9Y215 455 aaPredicted RBP23.71■■□□□ 1.39
RAB28-201ENST00000288723 ATP11BQ9Y2G3 1177 aa23.71■■□□□ 1.39
RAB28-201ENST00000288723 RANBP2P49792 3224 aaKnown RBP23.71■■□□□ 1.39
RAB28-201ENST00000288723 A0A1W2PQ45 241 aaPredicted RBP23.7■■□□□ 1.39
RAB28-201ENST00000288723 A0A1W2PQY0 241 aa23.7■■□□□ 1.39
RAB28-201ENST00000288723 CTAGE5O15320 804 aa23.7■■□□□ 1.39
RAB28-201ENST00000288723 DYNC1LI2O43237 492 aaPredicted RBP23.7■■□□□ 1.39
RAB28-201ENST00000288723 EIF2AK2P19525 551 aaKnown RBP23.7■■□□□ 1.39
RAB28-201ENST00000288723 RTP1P59025 263 aa23.7■■□□□ 1.39
RAB28-201ENST00000288723 GNASQ5JWF2 1037 aa23.7■■□□□ 1.39
RAB28-201ENST00000288723 Q6ZUG5 572 aa23.7■■□□□ 1.39
RAB28-201ENST00000288723 TLK2Q86UE8 772 aa23.7■■□□□ 1.39
RAB28-201ENST00000288723 NSUN6Q8TEA1 469 aaKnown RBP23.7■■□□□ 1.39
RAB28-201ENST00000288723 MPHOSPH6Q99547 160 aaKnown RBP23.7■■□□□ 1.39
RAB28-201ENST00000288723 WDR11Q9BZH6 1224 aa23.7■■□□□ 1.39
RAB28-201ENST00000288723 NAP1L2Q9ULW6 460 aaPredicted RBP23.7■■□□□ 1.39
RAB28-201ENST00000288723 KLF18A0A0U1RQI7 1052 aa23.7■■□□□ 1.38
RAB28-201ENST00000288723 SMARCA1P28370 1054 aa23.7■■□□□ 1.38
RAB28-201ENST00000288723 ARHGEF16Q5VV41 709 aa23.7■■□□□ 1.38
RAB28-201ENST00000288723 TMTC3Q6ZXV5 915 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms