RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 LRRC37A3O60309 1634 aa14.85□□□□□ -0.03
SCAF4-201ENST00000286835 MST1RQ04912 1400 aa14.85□□□□□ -0.03
SCAF4-201ENST00000286835 TCRBV5S4A2TA0A5A2 114 aa14.85□□□□□ -0.03
SCAF4-201ENST00000286835 E7EVH7 732 aa14.85□□□□□ -0.03
SCAF4-201ENST00000286835 FBXW10Q5XX13 1052 aa14.85□□□□□ -0.03
SCAF4-201ENST00000286835 MICALCLQ6ZW33 695 aa14.85□□□□□ -0.03
SCAF4-201ENST00000286835 KANSL2Q9H9L4 492 aa14.85□□□□□ -0.03
SCAF4-201ENST00000286835 TACC3Q9Y6A5 838 aa14.85□□□□□ -0.03
SCAF4-201ENST00000286835 A0A087WUV0 522 aaPredicted RBP14.85□□□□□ -0.03
SCAF4-201ENST00000286835 KIF11P52732 1056 aa14.85□□□□□ -0.03
SCAF4-201ENST00000286835 CT47A1Q5JQC4 288 aaPredicted RBP14.85□□□□□ -0.03
SCAF4-201ENST00000286835 CEP85LQ5SZL2 805 aa14.85□□□□□ -0.03
SCAF4-201ENST00000286835 UBLCP1Q8WVY7 318 aaPredicted RBP14.85□□□□□ -0.03
SCAF4-201ENST00000286835 KRT12Q99456 494 aa14.85□□□□□ -0.03
SCAF4-201ENST00000286835 OVOS2A0A0G2JMS6 1433 aa14.85□□□□□ -0.03
SCAF4-201ENST00000286835 USP17L8P0C7I0 530 aa14.85□□□□□ -0.03
SCAF4-201ENST00000286835 TRIM28Q13263 835 aaKnown RBP14.85□□□□□ -0.03
SCAF4-201ENST00000286835 CNNM4Q6P4Q7 775 aa14.85□□□□□ -0.03
SCAF4-201ENST00000286835 PACS2Q86VP3 889 aa14.85□□□□□ -0.03
SCAF4-201ENST00000286835 IFT20Q8IY31 132 aa14.85□□□□□ -0.03
SCAF4-201ENST00000286835 DMGDHQ9UI17 866 aaKnown RBP14.85□□□□□ -0.03
SCAF4-201ENST00000286835 PCDHA13Q9Y5I0 950 aa14.85□□□□□ -0.03
SCAF4-201ENST00000286835 HSPA1LP34931 641 aa14.84□□□□□ -0.03
SCAF4-201ENST00000286835 PKN1Q16512 942 aa14.84□□□□□ -0.03
SCAF4-201ENST00000286835 KCTD19Q17RG1 926 aaPredicted RBP14.84□□□□□ -0.03
SCAF4-201ENST00000286835 CFAP221Q4G0U5 840 aa14.84□□□□□ -0.03
SCAF4-201ENST00000286835 TRAPPC11Q7Z392 1133 aa14.84□□□□□ -0.03
SCAF4-201ENST00000286835 KRT27Q7Z3Y8 459 aa14.84□□□□□ -0.03
SCAF4-201ENST00000286835 ADGRA1Q86SQ6 560 aa14.84□□□□□ -0.03
SCAF4-201ENST00000286835 HDAC7Q8WUI4 952 aa14.84□□□□□ -0.03
SCAF4-201ENST00000286835 MS4A14Q96JA4 679 aa14.84□□□□□ -0.03
SCAF4-201ENST00000286835 PACSIN2Q9UNF0 486 aaPredicted RBP14.84□□□□□ -0.03
SCAF4-201ENST00000286835 RGPD2P0DJD1 1756 aa14.84□□□□□ -0.03
SCAF4-201ENST00000286835 USP17L3A6NCW0 530 aa14.84□□□□□ -0.03
SCAF4-201ENST00000286835 USP17L4A6NCW7 530 aa14.84□□□□□ -0.03
SCAF4-201ENST00000286835 WTIPA6NIX2 430 aaPredicted RBP14.84□□□□□ -0.03
SCAF4-201ENST00000286835 HEXIM1O94992 359 aaKnown RBP14.84□□□□□ -0.03
SCAF4-201ENST00000286835 MYBL2P10244 700 aa14.84□□□□□ -0.03
SCAF4-201ENST00000286835 HERVK_113P62684 666 aa14.84□□□□□ -0.03
SCAF4-201ENST00000286835 CCNI2Q6ZMN8 369 aaPredicted RBP14.84□□□□□ -0.03
SCAF4-201ENST00000286835 USP17L1Q7RTZ2 530 aa14.84□□□□□ -0.03
SCAF4-201ENST00000286835 ZNF804AQ7Z570 1209 aa14.84□□□□□ -0.03
SCAF4-201ENST00000286835 TLDC2A0PJX2 215 aa14.84□□□□□ -0.03
SCAF4-201ENST00000286835 NNTQ13423 1086 aa14.84□□□□□ -0.03
SCAF4-201ENST00000286835 STAG2Q8N3U4 1231 aa14.84□□□□□ -0.03
SCAF4-201ENST00000286835 CCDC114Q96M63 670 aa14.84□□□□□ -0.03
SCAF4-201ENST00000286835 THRAP3Q9Y2W1 955 aaKnown RBP14.84□□□□□ -0.03
SCAF4-201ENST00000286835 ITIH6Q6UXX5 1313 aa14.83□□□□□ -0.03
SCAF4-201ENST00000286835 KRT14P02533 472 aa14.83□□□□□ -0.03
SCAF4-201ENST00000286835 ANKRD40Q6AI12 368 aa14.83□□□□□ -0.03
SCAF4-201ENST00000286835 PROCA1Q8NCQ7 364 aaPredicted RBP14.83□□□□□ -0.03
SCAF4-201ENST00000286835 ANKRD2Q9GZV1 360 aa14.83□□□□□ -0.03
SCAF4-201ENST00000286835 C6orf50Q9HD87 102 aa14.83□□□□□ -0.03
SCAF4-201ENST00000286835 TCEAL9Q9UHQ7 104 aa14.83□□□□□ -0.03
SCAF4-201ENST00000286835 CAPN11Q9UMQ6 739 aa14.83□□□□□ -0.03
SCAF4-201ENST00000286835 CEP104O60308 925 aa14.83□□□□□ -0.04
SCAF4-201ENST00000286835 DDAH1O94760 285 aa14.83□□□□□ -0.04
SCAF4-201ENST00000286835 LDHBP07195 334 aaKnown RBP14.83□□□□□ -0.04
SCAF4-201ENST00000286835 CYP19A1P11511 503 aaPredicted RBP14.83□□□□□ -0.04
SCAF4-201ENST00000286835 ADSSL1Q8N142 457 aa14.83□□□□□ -0.04
SCAF4-201ENST00000286835 MARCH10Q8NA82 808 aaPredicted RBP14.83□□□□□ -0.04
SCAF4-201ENST00000286835 SCLT1Q96NL6 688 aa14.83□□□□□ -0.04
SCAF4-201ENST00000286835 TMEM60Q9H2L4 133 aa14.83□□□□□ -0.04
SCAF4-201ENST00000286835 SMCO2A6NFE2 343 aa14.83□□□□□ -0.04
SCAF4-201ENST00000286835 TCP1P17987 556 aaKnown RBP14.83□□□□□ -0.04
SCAF4-201ENST00000286835 GNAQP50148 359 aa14.83□□□□□ -0.04
SCAF4-201ENST00000286835 IRAK1P51617 712 aa14.83□□□□□ -0.04
SCAF4-201ENST00000286835 EVX2Q03828 476 aa14.83□□□□□ -0.04
SCAF4-201ENST00000286835 GFPT1Q06210 699 aaPredicted RBP14.83□□□□□ -0.04
SCAF4-201ENST00000286835 ERFEQ4G0M1 354 aa14.83□□□□□ -0.04
SCAF4-201ENST00000286835 MAPKAPK5Q8IW41 473 aa14.83□□□□□ -0.04
SCAF4-201ENST00000286835 SPATA4Q8NEY3 305 aa14.83□□□□□ -0.04
SCAF4-201ENST00000286835 RAB34Q9BZG1 259 aa14.83□□□□□ -0.04
SCAF4-201ENST00000286835 ZNF287Q9HBT7 754 aa14.83□□□□□ -0.04
SCAF4-201ENST00000286835 CHD2O14647 1828 aaKnown RBP14.83□□□□□ -0.04
SCAF4-201ENST00000286835 CCNE1P24864 410 aa14.82□□□□□ -0.04
SCAF4-201ENST00000286835 STK4Q13043 487 aa14.82□□□□□ -0.04
SCAF4-201ENST00000286835 NONOQ15233 471 aaKnown RBP eCLIP14.82□□□□□ -0.042e-9■□□□□ 10
SCAF4-201ENST00000286835 GOLGA8KD6RF30 607 aa14.82□□□□□ -0.04
SCAF4-201ENST00000286835 POLR2FP61218 127 aaKnown RBP14.82□□□□□ -0.04
SCAF4-201ENST00000286835 CACNB1Q02641 598 aaPredicted RBP14.82□□□□□ -0.04
SCAF4-201ENST00000286835 IFT88Q13099 833 aa14.82□□□□□ -0.04
SCAF4-201ENST00000286835 KRT79Q5XKE5 535 aa14.82□□□□□ -0.04
SCAF4-201ENST00000286835 B4GALNT4Q76KP1 1039 aa14.82□□□□□ -0.04
SCAF4-201ENST00000286835 ELOA2Q8IYF1 753 aaPredicted RBP14.82□□□□□ -0.04
SCAF4-201ENST00000286835 SNX29Q8TEQ0 813 aa14.82□□□□□ -0.04
SCAF4-201ENST00000286835 THAP9Q9H5L6 903 aa14.82□□□□□ -0.04
SCAF4-201ENST00000286835 PCDHA4Q9UN74 947 aa14.82□□□□□ -0.04
SCAF4-201ENST00000286835 PDE2AO00408 941 aaPredicted RBP14.82□□□□□ -0.04
SCAF4-201ENST00000286835 PSMD14O00487 310 aa14.82□□□□□ -0.04
SCAF4-201ENST00000286835 OR52Z1P0C646 297 aa14.82□□□□□ -0.04
SCAF4-201ENST00000286835 TXNRD1Q16881 649 aa14.82□□□□□ -0.04
SCAF4-201ENST00000286835 SLC9C1Q4G0N8 1177 aa14.82□□□□□ -0.04
SCAF4-201ENST00000286835 CAPN6Q9Y6Q1 641 aa14.82□□□□□ -0.04
SCAF4-201ENST00000286835 TOPAZ1Q8N9V7 1692 aa14.82□□□□□ -0.04
SCAF4-201ENST00000286835 TRAPPC10P48553 1259 aa14.81□□□□□ -0.04
SCAF4-201ENST00000286835 CORO7P57737 925 aa14.81□□□□□ -0.04
SCAF4-201ENST00000286835 PAK2Q13177 524 aa14.81□□□□□ -0.04
SCAF4-201ENST00000286835 WDR93Q6P2C0 686 aa14.81□□□□□ -0.04
SCAF4-201ENST00000286835 CCDC121Q6ZUS5 278 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms