RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 LRRC47Q8N1G4 583 aaKnown RBP17.28■□□□□ 0.36
USP43-201ENST00000285199 NDST4Q9H3R1 872 aa17.28■□□□□ 0.36
USP43-201ENST00000285199 PLAAQ9Y263 795 aa17.28■□□□□ 0.36
USP43-201ENST00000285199 CYP2D6P10635 497 aa17.28■□□□□ 0.36
USP43-201ENST00000285199 SETDB1Q15047 1291 aa17.28■□□□□ 0.36
USP43-201ENST00000285199 USH1GQ495M9 461 aa17.28■□□□□ 0.36
USP43-201ENST00000285199 CADPS2Q86UW7 1296 aa17.28■□□□□ 0.36
USP43-201ENST00000285199 ARHGEF2Q92974 986 aaKnown RBP17.28■□□□□ 0.36
USP43-201ENST00000285199 CCDC77Q9BR77 488 aa17.28■□□□□ 0.36
USP43-201ENST00000285199 SPDYE3A6NKU9 549 aa17.28■□□□□ 0.36
USP43-201ENST00000285199 A6NNZ2 444 aa17.28■□□□□ 0.36
USP43-201ENST00000285199 LONP1P36776 959 aaKnown RBP17.28■□□□□ 0.36
USP43-201ENST00000285199 ZNF131P52739 623 aa17.28■□□□□ 0.36
USP43-201ENST00000285199 TUBB8Q3ZCM7 444 aa17.28■□□□□ 0.36
USP43-201ENST00000285199 CCDC63Q8NA47 563 aa17.28■□□□□ 0.36
USP43-201ENST00000285199 BTG4Q9NY30 223 aa17.28■□□□□ 0.36
USP43-201ENST00000285199 USP17L3A6NCW0 530 aa17.27■□□□□ 0.36
USP43-201ENST00000285199 USP17L4A6NCW7 530 aa17.27■□□□□ 0.36
USP43-201ENST00000285199 NBPF26B4DH59 902 aa17.27■□□□□ 0.36
USP43-201ENST00000285199 EPB41P11171 864 aaKnown RBP17.27■□□□□ 0.36
USP43-201ENST00000285199 NBPF10Q6P3W6 841 aaKnown RBP17.27■□□□□ 0.36
USP43-201ENST00000285199 LRRC31Q6UY01 552 aa17.27■□□□□ 0.36
USP43-201ENST00000285199 USP17L1Q7RTZ2 530 aa17.27■□□□□ 0.36
USP43-201ENST00000285199 GPBP1Q86WP2 473 aa17.27■□□□□ 0.36
USP43-201ENST00000285199 NBPF15Q8N660 670 aa17.27■□□□□ 0.36
USP43-201ENST00000285199 OR2W6PQ8NHA6 318 aa17.27■□□□□ 0.36
USP43-201ENST00000285199 SWAP70Q9UH65 585 aa17.27■□□□□ 0.36
USP43-201ENST00000285199 L1RE1Q9UN81 338 aa17.27■□□□□ 0.36
USP43-201ENST00000285199 PALMO75781 387 aa17.27■□□□□ 0.36
USP43-201ENST00000285199 CIAO1O76071 339 aa17.27■□□□□ 0.36
USP43-201ENST00000285199 FCER1AP12319 257 aa17.27■□□□□ 0.36
USP43-201ENST00000285199 CD44P16070 742 aaKnown RBP17.27■□□□□ 0.36
USP43-201ENST00000285199 CYP2J2P51589 502 aa17.27■□□□□ 0.36
USP43-201ENST00000285199 IRAK1P51617 712 aa17.27■□□□□ 0.36
USP43-201ENST00000285199 ATP11AP98196 1134 aa17.27■□□□□ 0.36
USP43-201ENST00000285199 MKRN4PQ13434 485 aaPredicted RBP17.27■□□□□ 0.36
USP43-201ENST00000285199 SPATA4Q8NEY3 305 aa17.27■□□□□ 0.36
USP43-201ENST00000285199 USP17L8P0C7I0 530 aa17.27■□□□□ 0.35
USP43-201ENST00000285199 SARNPP82979 210 aaKnown RBP17.27■□□□□ 0.35
USP43-201ENST00000285199 FOXO4P98177 505 aa17.27■□□□□ 0.35
USP43-201ENST00000285199 PPP2R5BQ15173 497 aa17.27■□□□□ 0.35
USP43-201ENST00000285199 FAM26FQ5R3K3 315 aa17.27■□□□□ 0.35
USP43-201ENST00000285199 KRT25Q7Z3Z0 450 aa17.27■□□□□ 0.35
USP43-201ENST00000285199 ZNF622Q969S3 477 aaKnown RBP eCLIP17.27■□□□□ 0.35
USP43-201ENST00000285199 LBHD1Q9BQE6 289 aaPredicted RBP17.27■□□□□ 0.35
USP43-201ENST00000285199 DDX39AO00148 427 aaKnown RBP17.26■□□□□ 0.35
USP43-201ENST00000285199 EZH2Q15910 746 aaKnown RBP17.26■□□□□ 0.35
USP43-201ENST00000285199 SEL1L2Q5TEA6 688 aa17.26■□□□□ 0.35
USP43-201ENST00000285199 CCDC174Q6PII3 467 aa17.26■□□□□ 0.35
USP43-201ENST00000285199 GOLPH3Q9H4A6 298 aa17.26■□□□□ 0.35
USP43-201ENST00000285199 AMFRQ9UKV5 643 aa17.26■□□□□ 0.35
USP43-201ENST00000285199 ERBB3P21860 1342 aa17.26■□□□□ 0.35
USP43-201ENST00000285199 LRRC53A6NM62 1247 aa17.26■□□□□ 0.35
USP43-201ENST00000285199 LGALS16A8MUM7 142 aa17.26■□□□□ 0.35
USP43-201ENST00000285199 USP17L2Q6R6M4 530 aa17.26■□□□□ 0.35
USP43-201ENST00000285199 DDX47Q9H0S4 455 aaKnown RBP17.26■□□□□ 0.35
USP43-201ENST00000285199 TBK1Q9UHD2 729 aa17.26■□□□□ 0.35
USP43-201ENST00000285199 MTUS1Q9ULD2 1270 aa17.26■□□□□ 0.35
USP43-201ENST00000285199 CHD1O14646 1710 aa17.26■□□□□ 0.35
USP43-201ENST00000285199 MROH5Q6ZUA9 1318 aa17.26■□□□□ 0.35
USP43-201ENST00000285199 H2AFZP0C0S5 128 aa17.26■□□□□ 0.35
USP43-201ENST00000285199 CCNE1P24864 410 aa17.26■□□□□ 0.35
USP43-201ENST00000285199 APBA1Q02410 837 aa17.26■□□□□ 0.35
USP43-201ENST00000285199 H2AFVQ71UI9 128 aa17.26■□□□□ 0.35
USP43-201ENST00000285199 NEK8Q86SG6 692 aa17.26■□□□□ 0.35
USP43-201ENST00000285199 INTS9Q9NV88 658 aaKnown RBP17.26■□□□□ 0.35
USP43-201ENST00000285199 ARPP21Q9UBL0 812 aaPredicted RBP17.26■□□□□ 0.35
USP43-201ENST00000285199 ARMCX3Q9UH62 379 aaPredicted RBP17.26■□□□□ 0.35
USP43-201ENST00000285199 USTQ9Y2C2 406 aa17.26■□□□□ 0.35
USP43-201ENST00000285199 MLH3Q9UHC1 1453 aa17.26■□□□□ 0.35
USP43-201ENST00000285199 POTEJP0CG39 1038 aa17.25■□□□□ 0.35
USP43-201ENST00000285199 RASGRP2Q7LDG7 609 aa17.25■□□□□ 0.35
USP43-201ENST00000285199 FNBP4Q8N3X1 1017 aaPredicted RBP17.25■□□□□ 0.35
USP43-201ENST00000285199 COA7Q96BR5 231 aa17.25■□□□□ 0.35
USP43-201ENST00000285199 BICD1Q96G01 975 aa17.25■□□□□ 0.35
USP43-201ENST00000285199 OSBPL9Q96SU4 736 aa17.25■□□□□ 0.35
USP43-201ENST00000285199 DISC1Q9NRI5 854 aa17.25■□□□□ 0.35
USP43-201ENST00000285199 HOMER2Q9NSB8 354 aa17.25■□□□□ 0.35
USP43-201ENST00000285199 PCDHA12Q9UN75 941 aa17.25■□□□□ 0.35
USP43-201ENST00000285199 IKBKGQ9Y6K9 419 aa17.25■□□□□ 0.35
USP43-201ENST00000285199 CLIC2O15247 247 aa17.25■□□□□ 0.35
USP43-201ENST00000285199 KIRREL3Q8IZU9 778 aa17.25■□□□□ 0.35
USP43-201ENST00000285199 KIAA1024Q9UPX6 916 aa17.25■□□□□ 0.35
USP43-201ENST00000285199 RPL13P26373 211 aaKnown RBP17.25■□□□□ 0.35
USP43-201ENST00000285199 MRPL12P52815 198 aaKnown RBP17.25■□□□□ 0.35
USP43-201ENST00000285199 HSPA2P54652 639 aa17.25■□□□□ 0.35
USP43-201ENST00000285199 ERVK-24P63145 666 aa17.25■□□□□ 0.35
USP43-201ENST00000285199 ENAHQ8N8S7 591 aaPredicted RBP17.25■□□□□ 0.35
USP43-201ENST00000285199 TBCKQ8TEA7 893 aa17.25■□□□□ 0.35
USP43-201ENST00000285199 ELAC2Q9BQ52 826 aaKnown RBP17.25■□□□□ 0.35
USP43-201ENST00000285199 PANK4Q9NVE7 773 aa17.25■□□□□ 0.35
USP43-201ENST00000285199 TSKSQ9UJT2 592 aa17.25■□□□□ 0.35
USP43-201ENST00000285199 LRRN2O75325 713 aa17.25■□□□□ 0.35
USP43-201ENST00000285199 XRCC5P13010 732 aaKnown RBP17.25■□□□□ 0.35
USP43-201ENST00000285199 KRT5P13647 590 aa17.25■□□□□ 0.35
USP43-201ENST00000285199 KCNJ6P48051 423 aa17.25■□□□□ 0.35
USP43-201ENST00000285199 STMN4Q9H169 189 aaPredicted RBP17.25■□□□□ 0.35
USP43-201ENST00000285199 MEIS1O00470 390 aa17.24■□□□□ 0.35
USP43-201ENST00000285199 PLEKP08567 350 aaPredicted RBP17.24■□□□□ 0.35
USP43-201ENST00000285199 GUCY2CP25092 1073 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms