RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 THSD7AQ9UPZ6 1657 aa10.14□□□□□ -0.79
CCDC144B-201ENST00000285176 CENPFP49454 3210 aa10.14□□□□□ -0.79
CCDC144B-201ENST00000285176 WDR19Q8NEZ3 1342 aa10.14□□□□□ -0.79
CCDC144B-201ENST00000285176 PALM3A6NDB9 673 aaPredicted RBP10.14□□□□□ -0.79
CCDC144B-201ENST00000285176 PTPN14Q15678 1187 aa10.14□□□□□ -0.79
CCDC144B-201ENST00000285176 PPP4R3BQ5MIZ7 849 aa10.14□□□□□ -0.79
CCDC144B-201ENST00000285176 ZFYVE27Q5T4F4 411 aa10.14□□□□□ -0.79
CCDC144B-201ENST00000285176 C16orf45Q96MC5 204 aaPredicted RBP10.14□□□□□ -0.79
CCDC144B-201ENST00000285176 CTNND2Q9UQB3 1225 aa10.14□□□□□ -0.79
CCDC144B-201ENST00000285176 GAS7O60861 476 aa10.14□□□□□ -0.79
CCDC144B-201ENST00000285176 PDE4DQ08499 809 aa10.14□□□□□ -0.79
CCDC144B-201ENST00000285176 SCLT1Q96NL6 688 aa10.14□□□□□ -0.79
CCDC144B-201ENST00000285176 PPP1R16BQ96T49 567 aa10.14□□□□□ -0.79
CCDC144B-201ENST00000285176 AS3MTQ9HBK9 375 aa10.14□□□□□ -0.79
CCDC144B-201ENST00000285176 SLC39A2Q9NP94 309 aa10.14□□□□□ -0.79
CCDC144B-201ENST00000285176 IFNKQ9P0W0 207 aa10.14□□□□□ -0.79
CCDC144B-201ENST00000285176 CMA1P23946 247 aa10.13□□□□□ -0.79
CCDC144B-201ENST00000285176 GOLGA8FQ08AF8 430 aa10.13□□□□□ -0.79
CCDC144B-201ENST00000285176 GOLGA8DPQ0D2H9 430 aa10.13□□□□□ -0.79
CCDC144B-201ENST00000285176 IDI2Q9BXS1 227 aa10.13□□□□□ -0.79
CCDC144B-201ENST00000285176 KIAA1468Q9P260 1216 aa10.13□□□□□ -0.79
CCDC144B-201ENST00000285176 HARSP12081 509 aaKnown RBP10.13□□□□□ -0.79
CCDC144B-201ENST00000285176 IREB2P48200 963 aaKnown RBP10.13□□□□□ -0.79
CCDC144B-201ENST00000285176 CTTNQ14247 550 aaKnown RBP10.13□□□□□ -0.79
CCDC144B-201ENST00000285176 VCPKMTQ9H867 229 aa10.13□□□□□ -0.79
CCDC144B-201ENST00000285176 PDS5AQ29RF7 1337 aaKnown RBP10.13□□□□□ -0.79
CCDC144B-201ENST00000285176 HDLBPQ00341 1268 aaKnown RBP10.13□□□□□ -0.79
CCDC144B-201ENST00000285176 ARHGAP29Q52LW3 1261 aa10.13□□□□□ -0.79
CCDC144B-201ENST00000285176 HSP90B2PQ58FF3 399 aa10.13□□□□□ -0.79
CCDC144B-201ENST00000285176 KRBA2Q6ZNG9 492 aa10.13□□□□□ -0.79
CCDC144B-201ENST00000285176 RDH13Q8NBN7 331 aa10.13□□□□□ -0.79
CCDC144B-201ENST00000285176 SLF1Q9BQI6 1058 aa10.13□□□□□ -0.79
CCDC144B-201ENST00000285176 NFIBO00712 420 aa10.12□□□□□ -0.79
CCDC144B-201ENST00000285176 CELF2O95319 508 aaKnown RBP10.12□□□□□ -0.79
CCDC144B-201ENST00000285176 MCM6Q14566 821 aa10.12□□□□□ -0.79
CCDC144B-201ENST00000285176 CCDC186Q7Z3E2 898 aa10.12□□□□□ -0.79
CCDC144B-201ENST00000285176 TICAM2Q86XR7 235 aa10.12□□□□□ -0.79
CCDC144B-201ENST00000285176 APOBEC3FQ8IUX4 373 aaKnown RBP10.12□□□□□ -0.79
CCDC144B-201ENST00000285176 ZNF280CQ8ND82 737 aa10.12□□□□□ -0.79
CCDC144B-201ENST00000285176 VPS16Q9H269 839 aa10.12□□□□□ -0.79
CCDC144B-201ENST00000285176 PAPPAQ13219 1627 aa10.12□□□□□ -0.79
CCDC144B-201ENST00000285176 CACNA1SQ13698 1873 aa10.12□□□□□ -0.79
CCDC144B-201ENST00000285176 SLC37A4O43826 429 aa10.12□□□□□ -0.79
CCDC144B-201ENST00000285176 PLCG1P19174 1290 aa10.12□□□□□ -0.79
CCDC144B-201ENST00000285176 GPC2Q8N158 579 aa10.12□□□□□ -0.79
CCDC144B-201ENST00000285176 RNF146Q9NTX7 359 aa10.12□□□□□ -0.79
CCDC144B-201ENST00000285176 ARHGAP4P98171 946 aa10.12□□□□□ -0.79
CCDC144B-201ENST00000285176 UVSSAQ2YD98 709 aa10.12□□□□□ -0.79
CCDC144B-201ENST00000285176 HERC4Q5GLZ8 1057 aaPredicted RBP10.12□□□□□ -0.79
CCDC144B-201ENST00000285176 UTP14CQ5TAP6 766 aaKnown RBP10.12□□□□□ -0.79
CCDC144B-201ENST00000285176 TRERF1Q96PN7 1200 aa10.12□□□□□ -0.79
CCDC144B-201ENST00000285176 RMDN3Q96TC7 470 aa10.12□□□□□ -0.79
CCDC144B-201ENST00000285176 RGL1Q9NZL6 768 aa10.12□□□□□ -0.79
CCDC144B-201ENST00000285176 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.12□□□□□ -0.79
CCDC144B-201ENST00000285176 GRIPAP1Q4V328 841 aa10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 PPP1R13LQ8WUF5 828 aa10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 NYAP2Q9P242 653 aa10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 MRPL11Q9Y3B7 192 aaKnown RBP10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 NFE2L3Q9Y4A8 694 aa10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 IVNS1ABPQ9Y6Y0 642 aa10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 BMP15O95972 392 aa10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 VCAM1P19320 739 aa10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 U2AF2P26368 475 aaKnown RBP eCLIP10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 MTIF2P46199 727 aaKnown RBP10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 UBASH3AP57075 661 aa10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 PRPF38AQ8NAV1 312 aaKnown RBP10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 MAP7D2Q96T17 732 aa10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 GDAQ9Y2T3 454 aa10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 POTEB3A0JP26 581 aa10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 POTECB2RU33 542 aa10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 E9PMD0 336 aa10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 CAVIN2O95810 425 aa10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 ATP1A3P13637 1013 aa10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 PTGS1P23219 599 aa10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 MARK3P27448 753 aa10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 PRELPP51888 382 aa10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 HIRAP54198 1017 aaPredicted RBP10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 GABPAQ06546 454 aa10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 CUL4BQ13620 913 aa10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 KIAA1755Q5JYT7 1200 aa10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 TEX35Q5T0J7 233 aa10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 LRCH2Q5VUJ6 765 aa10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 POTEBQ6S5H4 581 aa10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 MTERF4Q7Z6M4 381 aaKnown RBP10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 NMRK2Q9NPI5 230 aa10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 ADARB2Q9NS39 739 aaKnown RBP10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 AKAP11Q9UKA4 1901 aa10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 POTEFA5A3E0 1075 aa10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 TBCAO75347 108 aaKnown RBP10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 TNNT1P13805 278 aa10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 TNNT3P45378 269 aaPredicted RBP10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 EVCP57679 992 aa10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 BAATQ14032 418 aaPredicted RBP10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 SLC35G1Q2M3R5 365 aa10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 POTEGQ6S5H5 508 aa10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 POTEEQ6S8J3 1075 aa10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 SV2BQ7L1I2 683 aa10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 SYCP3Q8IZU3 236 aa10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 RUFY1Q96T51 708 aa10.11□□□□□ -0.79
CCDC144B-201ENST00000285176 ZNF577Q9BSK1 485 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms