RNA–Protein interactions for RNA: ENST00000283228.6

PTPRR-201, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRR, Length 3,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-201ENST00000283228 TMEM87BQ96K49 555 aa12.58□□□□□ -0.4
PTPRR-201ENST00000283228 FOXP1Q9H334 677 aaPredicted RBP12.58□□□□□ -0.4
PTPRR-201ENST00000283228 NOP53Q9NZM5 478 aaKnown RBP12.58□□□□□ -0.4
PTPRR-201ENST00000283228 CEP104O60308 925 aa12.58□□□□□ -0.4
PTPRR-201ENST00000283228 ZBED6P86452 979 aa12.58□□□□□ -0.4
PTPRR-201ENST00000283228 BZW1Q7L1Q6 419 aaKnown RBP12.58□□□□□ -0.4
PTPRR-201ENST00000283228 MGARPQ8TDB4 240 aa12.58□□□□□ -0.4
PTPRR-201ENST00000283228 PRCCQ92733 491 aaPredicted RBP12.58□□□□□ -0.4
PTPRR-201ENST00000283228 ZCWPW1Q9H0M4 648 aa12.58□□□□□ -0.4
PTPRR-201ENST00000283228 AATFQ9NY61 560 aaKnown RBP eCLIP12.58□□□□□ -0.4
PTPRR-201ENST00000283228 EVI5O60447 810 aa12.57□□□□□ -0.4
PTPRR-201ENST00000283228 SNUPNO95149 360 aaKnown RBP12.57□□□□□ -0.4
PTPRR-201ENST00000283228 PDHA1P08559 390 aa12.57□□□□□ -0.4
PTPRR-201ENST00000283228 PMS1P54277 932 aaKnown RBP12.57□□□□□ -0.4
PTPRR-201ENST00000283228 TNNC1P63316 161 aa12.57□□□□□ -0.4
PTPRR-201ENST00000283228 GLE1Q53GS7 698 aaKnown RBP12.57□□□□□ -0.4
PTPRR-201ENST00000283228 IQCKQ8N0W5 287 aa12.57□□□□□ -0.4
PTPRR-201ENST00000283228 ZNF579Q8NAF0 562 aaKnown RBP12.57□□□□□ -0.4
PTPRR-201ENST00000283228 DDX17Q92841 729 aaKnown RBP12.57□□□□□ -0.4
PTPRR-201ENST00000283228 NUP58Q9BVL2 599 aa12.57□□□□□ -0.4
PTPRR-201ENST00000283228 AP1M1Q9BXS5 423 aa12.57□□□□□ -0.4
PTPRR-201ENST00000283228 XDHP47989 1333 aa12.57□□□□□ -0.4
PTPRR-201ENST00000283228 TRIM37O94972 964 aa12.57□□□□□ -0.4
PTPRR-201ENST00000283228 KIF5BP33176 963 aa12.57□□□□□ -0.4
PTPRR-201ENST00000283228 ZC3H6P61129 1189 aaKnown RBP12.57□□□□□ -0.4
PTPRR-201ENST00000283228 PPP2R2AP63151 447 aa12.57□□□□□ -0.4
PTPRR-201ENST00000283228 MXRA7P84157 204 aa12.57□□□□□ -0.4
PTPRR-201ENST00000283228 GFPT1Q06210 699 aaPredicted RBP12.57□□□□□ -0.4
PTPRR-201ENST00000283228 ITGB3BPQ13352 177 aaPredicted RBP12.57□□□□□ -0.4
PTPRR-201ENST00000283228 NBPF9Q3BBW0 867 aa12.57□□□□□ -0.4
PTPRR-201ENST00000283228 METTL24Q5JXM2 366 aa12.57□□□□□ -0.4
PTPRR-201ENST00000283228 CAVIN3Q969G5 261 aa12.57□□□□□ -0.4
PTPRR-201ENST00000283228 DNAJC7Q99615 494 aa12.57□□□□□ -0.4
PTPRR-201ENST00000283228 LY9Q9HBG7 655 aa12.57□□□□□ -0.4
PTPRR-201ENST00000283228 FAM208AQ9UK61 1670 aaKnown RBP12.57□□□□□ -0.4
PTPRR-201ENST00000283228 KCNK3O14649 394 aa12.57□□□□□ -0.4
PTPRR-201ENST00000283228 GTPBP6O43824 516 aaPredicted RBP12.57□□□□□ -0.4
PTPRR-201ENST00000283228 RWDD2BP57060 319 aa12.57□□□□□ -0.4
PTPRR-201ENST00000283228 NLRP5P59047 1200 aa12.57□□□□□ -0.4
PTPRR-201ENST00000283228 TAF11Q15544 211 aa12.57□□□□□ -0.4
PTPRR-201ENST00000283228 NTRK3Q16288 839 aa12.57□□□□□ -0.4
PTPRR-201ENST00000283228 EARS2Q5JPH6 523 aaKnown RBP12.57□□□□□ -0.4
PTPRR-201ENST00000283228 ZNF658Q5TYW1 1059 aaPredicted RBP12.57□□□□□ -0.4
PTPRR-201ENST00000283228 PPP4R3AQ6IN85 833 aa12.57□□□□□ -0.4
PTPRR-201ENST00000283228 CNOT6LQ96LI5 555 aaKnown RBP12.57□□□□□ -0.4
PTPRR-201ENST00000283228 C15orf41Q9Y2V0 281 aa12.57□□□□□ -0.4
PTPRR-201ENST00000283228 RFX7Q2KHR2 1363 aa12.56□□□□□ -0.4
PTPRR-201ENST00000283228 RTN2O75298 545 aa12.56□□□□□ -0.4
PTPRR-201ENST00000283228 IFNAR1P17181 557 aa12.56□□□□□ -0.4
PTPRR-201ENST00000283228 NBPF20Q3BBV1 942 aa12.56□□□□□ -0.4
PTPRR-201ENST00000283228 RCSD1Q6JBY9 416 aa12.56□□□□□ -0.4
PTPRR-201ENST00000283228 AGAP11Q8TF27 550 aa12.56□□□□□ -0.4
PTPRR-201ENST00000283228 SH2D4AQ9H788 454 aa12.56□□□□□ -0.4
PTPRR-201ENST00000283228 SLC39A2Q9NP94 309 aa12.56□□□□□ -0.4
PTPRR-201ENST00000283228 ATXN2Q99700 1313 aaKnown RBP12.56□□□□□ -0.4
PTPRR-201ENST00000283228 CPDO75976 1380 aa12.56□□□□□ -0.4
PTPRR-201ENST00000283228 RAD51CO43502 376 aa12.56□□□□□ -0.4
PTPRR-201ENST00000283228 SLC8A3P57103 927 aa12.56□□□□□ -0.4
PTPRR-201ENST00000283228 PRPF4BQ13523 1007 aaKnown RBP12.56□□□□□ -0.4
PTPRR-201ENST00000283228 ATG9AQ7Z3C6 839 aa12.56□□□□□ -0.4
PTPRR-201ENST00000283228 KSR1Q8IVT5 923 aa12.56□□□□□ -0.4
PTPRR-201ENST00000283228 LRRC45Q96CN5 670 aa12.56□□□□□ -0.4
PTPRR-201ENST00000283228 ZNF496Q96IT1 587 aaPredicted RBP12.56□□□□□ -0.4
PTPRR-201ENST00000283228 TSC22D3Q99576 134 aa12.56□□□□□ -0.4
PTPRR-201ENST00000283228 FAM217BQ9NTX9 383 aaPredicted RBP12.56□□□□□ -0.4
PTPRR-201ENST00000283228 FBXL5Q9UKA1 691 aa12.56□□□□□ -0.4
PTPRR-201ENST00000283228 NEFHP12036 1026 aa12.55□□□□□ -0.4
PTPRR-201ENST00000283228 HSD17B3P37058 310 aa12.55□□□□□ -0.4
PTPRR-201ENST00000283228 UBA7P41226 1012 aa12.55□□□□□ -0.4
PTPRR-201ENST00000283228 ADCY2Q08462 1091 aa12.55□□□□□ -0.4
PTPRR-201ENST00000283228 UBR1Q8IWV7 1749 aa12.55□□□□□ -0.4
PTPRR-201ENST00000283228 BAZ2BQ9UIF8 2168 aaKnown RBP12.55□□□□□ -0.4
PTPRR-201ENST00000283228 MYH10P35580 1976 aa12.55□□□□□ -0.4
PTPRR-201ENST00000283228 LGR5O75473 907 aa12.55□□□□□ -0.4
PTPRR-201ENST00000283228 PALMO75781 387 aa12.55□□□□□ -0.4
PTPRR-201ENST00000283228 TCIRG1Q13488 830 aa12.55□□□□□ -0.4
PTPRR-201ENST00000283228 ZNF790Q6PG37 636 aa12.55□□□□□ -0.4
PTPRR-201ENST00000283228 PPP1R12CQ9BZL4 782 aa12.55□□□□□ -0.4
PTPRR-201ENST00000283228 GOLPH3Q9H4A6 298 aa12.55□□□□□ -0.4
PTPRR-201ENST00000283228 TAF1DQ9H5J8 278 aaPredicted RBP12.55□□□□□ -0.4
PTPRR-201ENST00000283228 PANK4Q9NVE7 773 aa12.55□□□□□ -0.4
PTPRR-201ENST00000283228 DCDC2CA8MYV0 355 aa12.55□□□□□ -0.4
PTPRR-201ENST00000283228 WNT7AO00755 349 aa12.55□□□□□ -0.4
PTPRR-201ENST00000283228 ZNF263O14978 683 aa12.55□□□□□ -0.4
PTPRR-201ENST00000283228 FOXP2O15409 715 aa12.55□□□□□ -0.4
PTPRR-201ENST00000283228 ARID4AP29374 1257 aaPredicted RBP12.55□□□□□ -0.4
PTPRR-201ENST00000283228 RANBP1P43487 201 aa12.55□□□□□ -0.4
PTPRR-201ENST00000283228 ASIC1P78348 528 aa12.55□□□□□ -0.4
PTPRR-201ENST00000283228 ADAT2Q7Z6V5 191 aaKnown RBP12.55□□□□□ -0.4
PTPRR-201ENST00000283228 WHAMMQ8TF30 809 aa12.55□□□□□ -0.4
PTPRR-201ENST00000283228 FERMT2Q96AC1 680 aa12.55□□□□□ -0.4
PTPRR-201ENST00000283228 KLHL29Q96CT2 875 aa12.55□□□□□ -0.4
PTPRR-201ENST00000283228 OSBPL1AQ9BXW6 950 aa12.55□□□□□ -0.4
PTPRR-201ENST00000283228 TMBIM4Q9HC24 238 aa12.55□□□□□ -0.4
PTPRR-201ENST00000283228 BATF3Q9NR55 127 aa12.55□□□□□ -0.4
PTPRR-201ENST00000283228 ATP8A1Q9Y2Q0 1164 aa12.55□□□□□ -0.4
PTPRR-201ENST00000283228 ZNF532Q9HCE3 1301 aa12.55□□□□□ -0.4
PTPRR-201ENST00000283228 USP31Q70CQ4 1352 aa12.55□□□□□ -0.4
PTPRR-201ENST00000283228 CCT8L1PA6NM43 557 aa12.54□□□□□ -0.4
PTPRR-201ENST00000283228 UTYO14607 1347 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms