RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 LMOD1P29536 600 aaPredicted RBP12.44□□□□□ -0.42
GGPS1-201ENST00000282841 PPP4R3BQ5MIZ7 849 aa12.44□□□□□ -0.42
GGPS1-201ENST00000282841 PURBQ96QR8 312 aaKnown RBP12.44□□□□□ -0.42
GGPS1-201ENST00000282841 NUDT12Q9BQG2 462 aa12.44□□□□□ -0.42
GGPS1-201ENST00000282841 PRDM10Q9NQV6 1147 aa12.44□□□□□ -0.42
GGPS1-201ENST00000282841 EMILIN3Q9NT22 766 aa12.44□□□□□ -0.42
GGPS1-201ENST00000282841 FLOT1O75955 427 aa12.43□□□□□ -0.42
GGPS1-201ENST00000282841 OR52Z1P0C646 297 aa12.43□□□□□ -0.42
GGPS1-201ENST00000282841 POTEIP0CG38 1075 aa12.43□□□□□ -0.42
GGPS1-201ENST00000282841 POTEJP0CG39 1038 aa12.43□□□□□ -0.42
GGPS1-201ENST00000282841 CHRM1P11229 460 aaPredicted RBP12.43□□□□□ -0.42
GGPS1-201ENST00000282841 MAP3K10Q02779 954 aa12.43□□□□□ -0.42
GGPS1-201ENST00000282841 IQCB1Q15051 598 aa12.43□□□□□ -0.42
GGPS1-201ENST00000282841 CALCRLQ16602 461 aa12.43□□□□□ -0.42
GGPS1-201ENST00000282841 DHX40Q8IX18 779 aaKnown RBP12.43□□□□□ -0.42
GGPS1-201ENST00000282841 TRMT44Q8IYL2 757 aaKnown RBP12.43□□□□□ -0.42
GGPS1-201ENST00000282841 ZNF579Q8NAF0 562 aaKnown RBP12.43□□□□□ -0.42
GGPS1-201ENST00000282841 PAGE5Q96GU1 130 aa12.43□□□□□ -0.42
GGPS1-201ENST00000282841 RAVER2Q9HCJ3 691 aaKnown RBP12.43□□□□□ -0.42
GGPS1-201ENST00000282841 MAPK8IP1Q9UQF2 711 aa12.43□□□□□ -0.42
GGPS1-201ENST00000282841 ESYT2A0FGR8 921 aa12.43□□□□□ -0.42
GGPS1-201ENST00000282841 BECN2A8MW95 431 aa12.43□□□□□ -0.42
GGPS1-201ENST00000282841 MARCH6O60337 910 aa12.43□□□□□ -0.42
GGPS1-201ENST00000282841 CLK2P49760 499 aaKnown RBP12.43□□□□□ -0.42
GGPS1-201ENST00000282841 ANO3Q9BYT9 981 aa12.43□□□□□ -0.42
GGPS1-201ENST00000282841 ANO10Q9NW15 660 aa12.43□□□□□ -0.42
GGPS1-201ENST00000282841 KCNG1Q9UIX4 513 aa12.43□□□□□ -0.42
GGPS1-201ENST00000282841 FAM237AA0A1B0GTK4 181 aa12.42□□□□□ -0.42
GGPS1-201ENST00000282841 CTNND1O60716 968 aaKnown RBP12.42□□□□□ -0.42
GGPS1-201ENST00000282841 VCAM1P19320 739 aa12.42□□□□□ -0.42
GGPS1-201ENST00000282841 STAT3P40763 770 aa12.42□□□□□ -0.42
GGPS1-201ENST00000282841 UBA7P41226 1012 aa12.42□□□□□ -0.42
GGPS1-201ENST00000282841 CUL4BQ13620 913 aa12.42□□□□□ -0.42
GGPS1-201ENST00000282841 KLHL10Q6JEL2 608 aa12.42□□□□□ -0.42
GGPS1-201ENST00000282841 TRIM44Q96DX7 344 aaPredicted RBP12.42□□□□□ -0.42
GGPS1-201ENST00000282841 DDX25Q9UHL0 483 aaKnown RBP12.42□□□□□ -0.42
GGPS1-201ENST00000282841 MYH7BA7E2Y1 1941 aa12.42□□□□□ -0.42
GGPS1-201ENST00000282841 PTPRAP18433 802 aa12.42□□□□□ -0.42
GGPS1-201ENST00000282841 CCDC173Q0VFZ6 552 aa12.42□□□□□ -0.42
GGPS1-201ENST00000282841 PRR16Q569H4 304 aa12.42□□□□□ -0.42
GGPS1-201ENST00000282841 CEP57L1Q8IYX8 460 aa12.42□□□□□ -0.42
GGPS1-201ENST00000282841 RPAP3Q9H6T3 665 aaPredicted RBP12.42□□□□□ -0.42
GGPS1-201ENST00000282841 PICK1Q9NRD5 415 aa12.42□□□□□ -0.42
GGPS1-201ENST00000282841 MAN1B1Q9UKM7 699 aa12.42□□□□□ -0.42
GGPS1-201ENST00000282841 NFIBO00712 420 aa12.41□□□□□ -0.42
GGPS1-201ENST00000282841 PTMAP06454 111 aaKnown RBP12.41□□□□□ -0.42
GGPS1-201ENST00000282841 KRT26Q7Z3Y9 468 aa12.41□□□□□ -0.42
GGPS1-201ENST00000282841 LDHDQ86WU2 507 aa12.41□□□□□ -0.42
GGPS1-201ENST00000282841 CLMNQ96JQ2 1002 aa12.41□□□□□ -0.42
GGPS1-201ENST00000282841 TTC12Q9H892 705 aaPredicted RBP12.41□□□□□ -0.42
GGPS1-201ENST00000282841 GOLGA6L19H0YKK7 550 aa12.41□□□□□ -0.42
GGPS1-201ENST00000282841 BMP15O95972 392 aa12.41□□□□□ -0.42
GGPS1-201ENST00000282841 ALAS1P13196 640 aa12.41□□□□□ -0.42
GGPS1-201ENST00000282841 STAT6P42226 847 aa12.41□□□□□ -0.42
GGPS1-201ENST00000282841 STX17P56962 302 aa12.41□□□□□ -0.42
GGPS1-201ENST00000282841 BTNL9Q6UXG8 535 aa12.41□□□□□ -0.42
GGPS1-201ENST00000282841 APOBEC3FQ8IUX4 373 aaKnown RBP12.41□□□□□ -0.42
GGPS1-201ENST00000282841 HAS1Q92839 578 aa12.41□□□□□ -0.42
GGPS1-201ENST00000282841 KLRG1Q96E93 195 aa12.41□□□□□ -0.42
GGPS1-201ENST00000282841 HOOK2Q96ED9 719 aa12.41□□□□□ -0.42
GGPS1-201ENST00000282841 TIGD1Q96MW7 591 aa12.41□□□□□ -0.42
GGPS1-201ENST00000282841 TRIM5Q9C035 493 aa12.41□□□□□ -0.42
GGPS1-201ENST00000282841 PKD2L1Q9P0L9 805 aa12.41□□□□□ -0.42
GGPS1-201ENST00000282841 SSC5DA1L4H1 1573 aa12.41□□□□□ -0.42
GGPS1-201ENST00000282841 FAM86B1E9PN63 330 aa12.4□□□□□ -0.42
GGPS1-201ENST00000282841 USP2O75604 605 aaPredicted RBP12.4□□□□□ -0.42
GGPS1-201ENST00000282841 FAM86B2P0C5J1 330 aa12.4□□□□□ -0.42
GGPS1-201ENST00000282841 SLFN14P0C7P3 912 aa12.4□□□□□ -0.42
GGPS1-201ENST00000282841 PLCG1P19174 1290 aa12.4□□□□□ -0.42
GGPS1-201ENST00000282841 NLRP12P59046 1061 aa12.4□□□□□ -0.42
GGPS1-201ENST00000282841 TTLL12Q14166 644 aaPredicted RBP12.4□□□□□ -0.42
GGPS1-201ENST00000282841 E2F4Q16254 413 aa12.4□□□□□ -0.42
GGPS1-201ENST00000282841 NAALADL2Q58DX5 795 aa12.4□□□□□ -0.42
GGPS1-201ENST00000282841 SCYL3Q8IZE3 742 aa12.4□□□□□ -0.42
GGPS1-201ENST00000282841 SMARCE1Q969G3 411 aa12.4□□□□□ -0.42
GGPS1-201ENST00000282841 DCPSQ96C86 337 aaKnown RBP12.4□□□□□ -0.42
GGPS1-201ENST00000282841 PPP1R9BQ96SB3 815 aa12.4□□□□□ -0.42
GGPS1-201ENST00000282841 ZNF408Q9H9D4 720 aa12.4□□□□□ -0.42
GGPS1-201ENST00000282841 CCPG1Q9ULG6 757 aa12.4□□□□□ -0.42
GGPS1-201ENST00000282841 SPDYE3A6NKU9 549 aa12.4□□□□□ -0.42
GGPS1-201ENST00000282841 ATP1A3P13637 1013 aa12.4□□□□□ -0.42
GGPS1-201ENST00000282841 ARHGAP4P98171 946 aa12.4□□□□□ -0.42
GGPS1-201ENST00000282841 SULF1Q8IWU6 871 aa12.4□□□□□ -0.42
GGPS1-201ENST00000282841 CHURC1Q8WUH1 139 aa12.4□□□□□ -0.42
GGPS1-201ENST00000282841 HPS3Q969F9 1004 aa12.4□□□□□ -0.42
GGPS1-201ENST00000282841 ATG4CQ96DT6 458 aa12.4□□□□□ -0.42
GGPS1-201ENST00000282841 POLD4Q9HCU8 107 aa12.4□□□□□ -0.42
GGPS1-201ENST00000282841 ADARB2Q9NS39 739 aaKnown RBP12.4□□□□□ -0.42
GGPS1-201ENST00000282841 TMEM51Q9NW97 253 aa12.4□□□□□ -0.42
GGPS1-201ENST00000282841 RNF216Q9NWF9 866 aaPredicted RBP12.4□□□□□ -0.42
GGPS1-201ENST00000282841 NRBP1Q9UHY1 535 aa12.4□□□□□ -0.42
GGPS1-201ENST00000282841 TUBE1Q9UJT0 475 aa12.4□□□□□ -0.42
GGPS1-201ENST00000282841 hCG_1984214I3L0E3 225 aa12.4□□□□□ -0.43
GGPS1-201ENST00000282841 LONP1P36776 959 aaKnown RBP12.4□□□□□ -0.43
GGPS1-201ENST00000282841 ECM1Q16610 540 aa12.4□□□□□ -0.43
GGPS1-201ENST00000282841 MUM1L1Q5H9M0 696 aa12.4□□□□□ -0.43
GGPS1-201ENST00000282841 RRAGBQ5VZM2 374 aa12.4□□□□□ -0.43
GGPS1-201ENST00000282841 DCAF15Q66K64 600 aa12.4□□□□□ -0.43
GGPS1-201ENST00000282841 ARL6IP4Q66PJ3 421 aaKnown RBP12.4□□□□□ -0.43
GGPS1-201ENST00000282841 CABP7Q86V35 215 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms