RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 JMJD4Q9H9V9 463 aa16.85■□□□□ 0.29
HMGN3-201ENST00000275036 STARD7Q9NQZ5 370 aa16.85■□□□□ 0.29
HMGN3-201ENST00000275036 MAD2L2Q9UI95 211 aa16.85■□□□□ 0.29
HMGN3-201ENST00000275036 SLC27A2O14975 620 aa16.84■□□□□ 0.29
HMGN3-201ENST00000275036 PQBP1O60828 265 aaKnown RBP16.84■□□□□ 0.29
HMGN3-201ENST00000275036 CALML3P27482 149 aa16.84■□□□□ 0.29
HMGN3-201ENST00000275036 TNFAIP2Q03169 654 aa16.84■□□□□ 0.29
HMGN3-201ENST00000275036 NECTIN1Q15223 517 aa16.84■□□□□ 0.29
HMGN3-201ENST00000275036 QRICH1Q2TAL8 776 aa16.84■□□□□ 0.29
HMGN3-201ENST00000275036 IGDCC4Q8TDY8 1250 aa16.84■□□□□ 0.29
HMGN3-201ENST00000275036 BADQ92934 168 aa16.84■□□□□ 0.29
HMGN3-201ENST00000275036 VAT1LQ9HCJ6 419 aa16.84■□□□□ 0.29
HMGN3-201ENST00000275036 GPHNQ9NQX3 736 aaPredicted RBP16.84■□□□□ 0.29
HMGN3-201ENST00000275036 PALM3A6NDB9 673 aaPredicted RBP16.83■□□□□ 0.28
HMGN3-201ENST00000275036 CLTBP09497 229 aa16.83■□□□□ 0.28
HMGN3-201ENST00000275036 RPS6P62753 249 aaKnown RBP16.83■□□□□ 0.28
HMGN3-201ENST00000275036 FAAP100Q0VG06 881 aa16.83■□□□□ 0.28
HMGN3-201ENST00000275036 KIAA1217Q5T5P2 1943 aa16.83■□□□□ 0.28
HMGN3-201ENST00000275036 RNF207Q6ZRF8 634 aa16.83■□□□□ 0.28
HMGN3-201ENST00000275036 ANKRD33Q7Z3H0 272 aa16.83■□□□□ 0.28
HMGN3-201ENST00000275036 TLK2Q86UE8 772 aa16.83■□□□□ 0.28
HMGN3-201ENST00000275036 TBC1D5Q92609 795 aa16.83■□□□□ 0.28
HMGN3-201ENST00000275036 LBHD1Q9BQE6 289 aaPredicted RBP16.83■□□□□ 0.28
HMGN3-201ENST00000275036 ANO2Q9NQ90 1003 aa16.83■□□□□ 0.28
HMGN3-201ENST00000275036 PRKAG2Q9UGJ0 569 aa16.83■□□□□ 0.28
HMGN3-201ENST00000275036 PNMA2Q9UL42 364 aa16.83■□□□□ 0.28
HMGN3-201ENST00000275036 KLRF2D3W0D1 207 aa16.82■□□□□ 0.28
HMGN3-201ENST00000275036 CDK7P50613 346 aa16.82■□□□□ 0.28
HMGN3-201ENST00000275036 TROAPQ12815 778 aa16.82■□□□□ 0.28
HMGN3-201ENST00000275036 GRM4Q14833 912 aa16.82■□□□□ 0.28
HMGN3-201ENST00000275036 WTAPQ15007 396 aa16.82■□□□□ 0.28
HMGN3-201ENST00000275036 TMEM67Q5HYA8 995 aa16.82■□□□□ 0.28
HMGN3-201ENST00000275036 GNASQ5JWF2 1037 aa16.82■□□□□ 0.28
HMGN3-201ENST00000275036 C9orf50Q5SZB4 431 aa16.82■□□□□ 0.28
HMGN3-201ENST00000275036 CREB3L3Q68CJ9 461 aa16.82■□□□□ 0.28
HMGN3-201ENST00000275036 MTMR8Q96EF0 704 aa16.82■□□□□ 0.28
HMGN3-201ENST00000275036 VTA1Q9NP79 307 aa16.82■□□□□ 0.28
HMGN3-201ENST00000275036 ELP1O95163 1332 aa16.81■□□□□ 0.28
HMGN3-201ENST00000275036 ERICH2A1L162 156 aa16.81■□□□□ 0.28
HMGN3-201ENST00000275036 KIAA0355O15063 1070 aa16.81■□□□□ 0.28
HMGN3-201ENST00000275036 DHX16O60231 1041 aaKnown RBP16.81■□□□□ 0.28
HMGN3-201ENST00000275036 PPP1R11O60927 126 aaPredicted RBP16.81■□□□□ 0.28
HMGN3-201ENST00000275036 EDNRBP24530 442 aa16.81■□□□□ 0.28
HMGN3-201ENST00000275036 EPHB4P54760 987 aa16.81■□□□□ 0.28
HMGN3-201ENST00000275036 Q7L0L9 218 aa16.81■□□□□ 0.28
HMGN3-201ENST00000275036 PCSK9Q8NBP7 692 aaKnown RBP16.81■□□□□ 0.28
HMGN3-201ENST00000275036 NUP133Q8WUM0 1156 aa16.81■□□□□ 0.28
HMGN3-201ENST00000275036 LY9Q9HBG7 655 aa16.81■□□□□ 0.28
HMGN3-201ENST00000275036 COL20A1Q9P218 1284 aa16.81■□□□□ 0.28
HMGN3-201ENST00000275036 ADD3Q9UEY8 706 aaKnown RBP16.81■□□□□ 0.28
HMGN3-201ENST00000275036 GRIN2DO15399 1336 aa16.8■□□□□ 0.28
HMGN3-201ENST00000275036 ABCB11O95342 1321 aa16.8■□□□□ 0.28
HMGN3-201ENST00000275036 OPLAHO14841 1288 aa16.8■□□□□ 0.28
HMGN3-201ENST00000275036 DYNC1LI2O43237 492 aaPredicted RBP16.8■□□□□ 0.28
HMGN3-201ENST00000275036 PRC1O43663 620 aa16.8■□□□□ 0.28
HMGN3-201ENST00000275036 CYTH3O43739 400 aa16.8■□□□□ 0.28
HMGN3-201ENST00000275036 CDC45O75419 566 aa16.8■□□□□ 0.28
HMGN3-201ENST00000275036 SART3Q15020 963 aaKnown RBP16.8■□□□□ 0.28
HMGN3-201ENST00000275036 SHHQ15465 462 aa16.8■□□□□ 0.28
HMGN3-201ENST00000275036 CXCL17Q6UXB2 119 aa16.8■□□□□ 0.28
HMGN3-201ENST00000275036 NOL8Q76FK4 1167 aaKnown RBP16.8■□□□□ 0.28
HMGN3-201ENST00000275036 FBXO11Q86XK2 927 aa16.8■□□□□ 0.28
HMGN3-201ENST00000275036 RGS22Q8NE09 1264 aa16.8■□□□□ 0.28
HMGN3-201ENST00000275036 GLT1D1Q96MS3 346 aa16.8■□□□□ 0.28
HMGN3-201ENST00000275036 TOX2Q96NM4 488 aa16.8■□□□□ 0.28
HMGN3-201ENST00000275036 SPC25Q9HBM1 224 aa16.8■□□□□ 0.28
HMGN3-201ENST00000275036 RBM47A0AV96 593 aaKnown RBP16.79■□□□□ 0.28
HMGN3-201ENST00000275036 FSCN1Q16658 493 aaKnown RBP16.79■□□□□ 0.28
HMGN3-201ENST00000275036 IQSEC1Q6DN90 963 aa16.79■□□□□ 0.28
HMGN3-201ENST00000275036 MYL10Q9BUA6 226 aa16.79■□□□□ 0.28
HMGN3-201ENST00000275036 RIOX1Q9H6W3 641 aa16.79■□□□□ 0.28
HMGN3-201ENST00000275036 TMEM39AQ9NV64 488 aa16.79■□□□□ 0.28
HMGN3-201ENST00000275036 TBX21Q9UL17 535 aa16.79■□□□□ 0.28
HMGN3-201ENST00000275036 LOC102724159A0A0B4J2E5 919 aa16.78■□□□□ 0.28
HMGN3-201ENST00000275036 A0A0U1RQG5 324 aaPredicted RBP16.78■□□□□ 0.28
HMGN3-201ENST00000275036 ARVCFO00192 962 aa16.78■□□□□ 0.28
HMGN3-201ENST00000275036 SH2B2O14492 632 aaPredicted RBP16.78■□□□□ 0.28
HMGN3-201ENST00000275036 ZBTB5O15062 677 aa16.78■□□□□ 0.28
HMGN3-201ENST00000275036 PWP2Q15269 919 aaKnown RBP16.78■□□□□ 0.28
HMGN3-201ENST00000275036 DUSP28Q4G0W2 176 aa16.78■□□□□ 0.28
HMGN3-201ENST00000275036 FAM126BQ8IXS8 530 aa16.78■□□□□ 0.28
HMGN3-201ENST00000275036 SLC43A3Q8NBI5 491 aa16.78■□□□□ 0.28
HMGN3-201ENST00000275036 DNERQ8NFT8 737 aa16.78■□□□□ 0.28
HMGN3-201ENST00000275036 SYTL5Q8TDW5 730 aaPredicted RBP16.78■□□□□ 0.28
HMGN3-201ENST00000275036 PIGSQ96S52 555 aa16.78■□□□□ 0.28
HMGN3-201ENST00000275036 AMNQ9BXJ7 453 aa16.78■□□□□ 0.28
HMGN3-201ENST00000275036 COL6A3P12111 3177 aa16.78■□□□□ 0.28
HMGN3-201ENST00000275036 MYH7BA7E2Y1 1941 aa16.78■□□□□ 0.28
HMGN3-201ENST00000275036 ARIH2O95376 493 aa16.77■□□□□ 0.28
HMGN3-201ENST00000275036 MCM5P33992 734 aa16.77■□□□□ 0.28
HMGN3-201ENST00000275036 PSMC6P62333 389 aa16.77■□□□□ 0.28
HMGN3-201ENST00000275036 GPR153Q6NV75 609 aa16.77■□□□□ 0.28
HMGN3-201ENST00000275036 CASC1Q6TDU7 716 aa16.77■□□□□ 0.28
HMGN3-201ENST00000275036 CATIPQ7Z7H3 387 aa16.77■□□□□ 0.28
HMGN3-201ENST00000275036 HOMER1Q86YM7 354 aa16.77■□□□□ 0.28
HMGN3-201ENST00000275036 RASEFQ8IZ41 740 aa16.77■□□□□ 0.28
HMGN3-201ENST00000275036 ZNF654Q8IZM8 581 aa16.77■□□□□ 0.28
HMGN3-201ENST00000275036 COPS5Q92905 334 aa16.77■□□□□ 0.28
HMGN3-201ENST00000275036 TAAR1Q96RJ0 339 aa16.77■□□□□ 0.28
HMGN3-201ENST00000275036 MTA3Q9BTC8 594 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms