RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 MROH5Q6ZUA9 1318 aa14.35□□□□□ -0.11
COL8A1-202ENST00000273342 TSPY2A6NKD2 308 aa14.35□□□□□ -0.11
COL8A1-202ENST00000273342 PLCG1P19174 1290 aa14.35□□□□□ -0.11
COL8A1-202ENST00000273342 PAFAH1B1P43034 410 aa14.35□□□□□ -0.11
COL8A1-202ENST00000273342 MAGEA1P43355 309 aa14.35□□□□□ -0.11
COL8A1-202ENST00000273342 DNAAF5Q86Y56 855 aa14.35□□□□□ -0.11
COL8A1-202ENST00000273342 THAP9Q9H5L6 903 aa14.35□□□□□ -0.11
COL8A1-202ENST00000273342 PPANQ9NQ55 473 aaKnown RBP14.35□□□□□ -0.11
COL8A1-202ENST00000273342 KIF1AQ12756 1690 aa14.34□□□□□ -0.11
COL8A1-202ENST00000273342 GOLGA8KD6RF30 607 aa14.34□□□□□ -0.11
COL8A1-202ENST00000273342 GOLGA8HP0CJ92 632 aa14.34□□□□□ -0.11
COL8A1-202ENST00000273342 CFAP58Q5T655 872 aa14.34□□□□□ -0.11
COL8A1-202ENST00000273342 SUSD4Q5VX71 490 aa14.34□□□□□ -0.11
COL8A1-202ENST00000273342 MAATS1Q7Z4T9 603 aa14.34□□□□□ -0.11
COL8A1-202ENST00000273342 P2RX5Q93086 422 aa14.34□□□□□ -0.11
COL8A1-202ENST00000273342 MTMR8Q96EF0 704 aa14.34□□□□□ -0.11
COL8A1-202ENST00000273342 BTG4Q9NY30 223 aa14.34□□□□□ -0.11
COL8A1-202ENST00000273342 TNS3Q68CZ2 1445 aa14.34□□□□□ -0.11
COL8A1-202ENST00000273342 PNPLA7Q6ZV29 1317 aa14.34□□□□□ -0.11
COL8A1-202ENST00000273342 ANO9A1A5B4 782 aa14.34□□□□□ -0.11
COL8A1-202ENST00000273342 LRRC53A6NM62 1247 aa14.34□□□□□ -0.11
COL8A1-202ENST00000273342 CPP00450 1065 aa14.34□□□□□ -0.11
COL8A1-202ENST00000273342 IFT88Q13099 833 aa14.34□□□□□ -0.11
COL8A1-202ENST00000273342 MIIPQ5JXC2 388 aa14.34□□□□□ -0.11
COL8A1-202ENST00000273342 KLHL7Q8IXQ5 586 aa14.34□□□□□ -0.11
COL8A1-202ENST00000273342 SLC4A9Q96Q91 983 aa14.34□□□□□ -0.11
COL8A1-202ENST00000273342 SH2D4AQ9H788 454 aa14.34□□□□□ -0.11
COL8A1-202ENST00000273342 RBM28Q9NW13 759 aaKnown RBP14.34□□□□□ -0.11
COL8A1-202ENST00000273342 BCCIPQ9P287 314 aaKnown RBP eCLIP14.34□□□□□ -0.11
COL8A1-202ENST00000273342 MYH13Q9UKX3 1938 aa14.34□□□□□ -0.11
COL8A1-202ENST00000273342 HEXIM1O94992 359 aaKnown RBP14.33□□□□□ -0.11
COL8A1-202ENST00000273342 LONP1P36776 959 aaKnown RBP14.33□□□□□ -0.11
COL8A1-202ENST00000273342 SLC1A4P43007 532 aa14.33□□□□□ -0.11
COL8A1-202ENST00000273342 EPHB4P54760 987 aa14.33□□□□□ -0.11
COL8A1-202ENST00000273342 CHRNDQ07001 517 aa14.33□□□□□ -0.11
COL8A1-202ENST00000273342 LETM2Q2VYF4 491 aa14.33□□□□□ -0.11
COL8A1-202ENST00000273342 C4orf32Q8N8J7 132 aa14.33□□□□□ -0.11
COL8A1-202ENST00000273342 GIMAP8Q8ND71 665 aaPredicted RBP14.33□□□□□ -0.11
COL8A1-202ENST00000273342 OR2W6PQ8NHA6 318 aa14.33□□□□□ -0.11
COL8A1-202ENST00000273342 KRT12Q99456 494 aa14.33□□□□□ -0.11
COL8A1-202ENST00000273342 SH3GL2Q99962 352 aa14.33□□□□□ -0.11
COL8A1-202ENST00000273342 GEMIN8Q9NWZ8 242 aaKnown RBP14.33□□□□□ -0.11
COL8A1-202ENST00000273342 GLI3P10071 1580 aa14.33□□□□□ -0.12
COL8A1-202ENST00000273342 LRRC41Q15345 812 aa14.33□□□□□ -0.12
COL8A1-202ENST00000273342 TXNRD1Q16881 649 aa14.33□□□□□ -0.12
COL8A1-202ENST00000273342 BRINP3Q76B58 766 aa14.33□□□□□ -0.12
COL8A1-202ENST00000273342 CCDC170Q8IYT3 715 aa14.33□□□□□ -0.12
COL8A1-202ENST00000273342 MMGT1Q8N4V1 131 aa14.33□□□□□ -0.12
COL8A1-202ENST00000273342 GOLPH3Q9H4A6 298 aa14.33□□□□□ -0.12
COL8A1-202ENST00000273342 MYH2Q9UKX2 1941 aa14.33□□□□□ -0.12
COL8A1-202ENST00000273342 ZNF233A6NK53 670 aa14.33□□□□□ -0.12
COL8A1-202ENST00000273342 MAP2K2P36507 400 aa14.33□□□□□ -0.12
COL8A1-202ENST00000273342 TECP42680 631 aa14.33□□□□□ -0.12
COL8A1-202ENST00000273342 ALS2CR12Q96Q35 445 aa14.33□□□□□ -0.12
COL8A1-202ENST00000273342 HYOU1Q9Y4L1 999 aa14.33□□□□□ -0.12
COL8A1-202ENST00000273342 NID2Q14112 1375 aa14.32□□□□□ -0.12
COL8A1-202ENST00000273342 E7EVH7 732 aa14.32□□□□□ -0.12
COL8A1-202ENST00000273342 IGHMBP2P38935 993 aaKnown RBP14.32□□□□□ -0.12
COL8A1-202ENST00000273342 HLTFQ14527 1009 aaKnown RBP eCLIP14.32□□□□□ -0.12
COL8A1-202ENST00000273342 PFKFB3Q16875 520 aaPredicted RBP14.32□□□□□ -0.12
COL8A1-202ENST00000273342 CACNA2D4Q7Z3S7 1137 aa14.32□□□□□ -0.12
COL8A1-202ENST00000273342 SUGP1Q8IWZ8 645 aaKnown RBP14.32□□□□□ -0.12
COL8A1-202ENST00000273342 YY1AP1Q9H869 796 aa14.32□□□□□ -0.12
COL8A1-202ENST00000273342 KCPQ6ZWJ8 1503 aa14.32□□□□□ -0.12
COL8A1-202ENST00000273342 LSP1P33241 339 aa14.32□□□□□ -0.12
COL8A1-202ENST00000273342 HDLBPQ00341 1268 aaKnown RBP14.32□□□□□ -0.12
COL8A1-202ENST00000273342 ACTN3Q08043 901 aaPredicted RBP14.32□□□□□ -0.12
COL8A1-202ENST00000273342 CCDC91Q7Z6B0 441 aa14.32□□□□□ -0.12
COL8A1-202ENST00000273342 CABP7Q86V35 215 aa14.32□□□□□ -0.12
COL8A1-202ENST00000273342 FNBP4Q8N3X1 1017 aaPredicted RBP14.32□□□□□ -0.12
COL8A1-202ENST00000273342 TLR10Q9BXR5 811 aa14.32□□□□□ -0.12
COL8A1-202ENST00000273342 VAT1LQ9HCJ6 419 aa14.32□□□□□ -0.12
COL8A1-202ENST00000273342 RHOBTB3O94955 611 aa14.31□□□□□ -0.12
COL8A1-202ENST00000273342 CCNE1P24864 410 aa14.31□□□□□ -0.12
COL8A1-202ENST00000273342 GLIS3Q8NEA6 775 aa14.31□□□□□ -0.12
COL8A1-202ENST00000273342 PURBQ96QR8 312 aaKnown RBP14.31□□□□□ -0.12
COL8A1-202ENST00000273342 RIOK1Q9BRS2 568 aaKnown RBP14.31□□□□□ -0.12
COL8A1-202ENST00000273342 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.31□□□□□ -0.12
COL8A1-202ENST00000273342 NUP58Q9BVL2 599 aa14.31□□□□□ -0.12
COL8A1-202ENST00000273342 LRP6O75581 1613 aa14.31□□□□□ -0.12
COL8A1-202ENST00000273342 MYH6P13533 1939 aa14.31□□□□□ -0.12
COL8A1-202ENST00000273342 CAMTA1Q9Y6Y1 1673 aa14.31□□□□□ -0.12
COL8A1-202ENST00000273342 NUP188Q5SRE5 1749 aa14.31□□□□□ -0.12
COL8A1-202ENST00000273342 EHHADHQ08426 723 aa14.31□□□□□ -0.12
COL8A1-202ENST00000273342 CEP85LQ5SZL2 805 aa14.31□□□□□ -0.12
COL8A1-202ENST00000273342 NAA35Q5VZE5 725 aa14.31□□□□□ -0.12
COL8A1-202ENST00000273342 SEMA6BQ9H3T3 888 aa14.31□□□□□ -0.12
COL8A1-202ENST00000273342 CCNT1O60563 726 aaKnown RBP14.31□□□□□ -0.12
COL8A1-202ENST00000273342 PPP2R5BQ15173 497 aa14.31□□□□□ -0.12
COL8A1-202ENST00000273342 GBP6Q6ZN66 633 aa14.31□□□□□ -0.12
COL8A1-202ENST00000273342 TRIM9Q9C026 710 aa14.31□□□□□ -0.12
COL8A1-202ENST00000273342 NDST4Q9H3R1 872 aa14.31□□□□□ -0.12
COL8A1-202ENST00000273342 BCL9LQ86UU0 1499 aa14.3□□□□□ -0.12
COL8A1-202ENST00000273342 ECM2O94769 699 aaPredicted RBP14.3□□□□□ -0.12
COL8A1-202ENST00000273342 ADAMTS2O95450 1211 aa14.3□□□□□ -0.12
COL8A1-202ENST00000273342 CALM1P0DP23 149 aa14.3□□□□□ -0.12
COL8A1-202ENST00000273342 CALM2P0DP24 149 aa14.3□□□□□ -0.12
COL8A1-202ENST00000273342 CALM3P0DP25 149 aa14.3□□□□□ -0.12
COL8A1-202ENST00000273342 NR1D1P20393 614 aa14.3□□□□□ -0.12
COL8A1-202ENST00000273342 DDX42Q86XP3 938 aaKnown RBP eCLIP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms