RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 ANXA13P27216 316 aa14.39□□□□□ -0.11
PRDM16-201ENST00000270722 MTIF3Q9H2K0 278 aaKnown RBP14.39□□□□□ -0.11
PRDM16-201ENST00000270722 C4BPBP20851 252 aa14.39□□□□□ -0.11
PRDM16-201ENST00000270722 STX1BP61266 288 aa14.39□□□□□ -0.11
PRDM16-201ENST00000270722 MRPL28Q13084 256 aaKnown RBP14.39□□□□□ -0.11
PRDM16-201ENST00000270722 UHRF1BP1Q6BDS2 1440 aa14.39□□□□□ -0.11
PRDM16-201ENST00000270722 ADALQ6DHV7 355 aa14.39□□□□□ -0.11
PRDM16-201ENST00000270722 SLC30A9Q6PML9 568 aa14.39□□□□□ -0.11
PRDM16-201ENST00000270722 BZW1Q7L1Q6 419 aaKnown RBP14.39□□□□□ -0.11
PRDM16-201ENST00000270722 ZBTB33Q86T24 672 aa14.39□□□□□ -0.11
PRDM16-201ENST00000270722 SNX21Q969T3 373 aa14.39□□□□□ -0.11
PRDM16-201ENST00000270722 CCDC17Q96LX7 622 aa14.39□□□□□ -0.11
PRDM16-201ENST00000270722 MMS19Q96T76 1030 aa14.39□□□□□ -0.11
PRDM16-201ENST00000270722 TBC1D2Q9BYX2 928 aa14.39□□□□□ -0.11
PRDM16-201ENST00000270722 KLHL14Q9P2G3 628 aa14.39□□□□□ -0.11
PRDM16-201ENST00000270722 S100A9P06702 114 aaKnown RBP14.39□□□□□ -0.11
PRDM16-201ENST00000270722 RECQLP46063 649 aaPredicted RBP14.39□□□□□ -0.11
PRDM16-201ENST00000270722 POLGP54098 1239 aaPredicted RBP14.39□□□□□ -0.11
PRDM16-201ENST00000270722 DRP2Q13474 957 aa14.39□□□□□ -0.11
PRDM16-201ENST00000270722 HDAC11Q96DB2 347 aa14.39□□□□□ -0.11
PRDM16-201ENST00000270722 CLSTN2Q9H4D0 955 aa14.39□□□□□ -0.11
PRDM16-201ENST00000270722 TMCC1O94876 653 aa14.39□□□□□ -0.11
PRDM16-201ENST00000270722 ITGA6P23229 1130 aa14.39□□□□□ -0.11
PRDM16-201ENST00000270722 BTG4Q9NY30 223 aa14.39□□□□□ -0.11
PRDM16-201ENST00000270722 GPC4O75487 556 aa14.39□□□□□ -0.11
PRDM16-201ENST00000270722 KRT6AP02538 564 aa14.39□□□□□ -0.11
PRDM16-201ENST00000270722 KRT6BP04259 564 aa14.39□□□□□ -0.11
PRDM16-201ENST00000270722 KRT6CP48668 564 aa14.39□□□□□ -0.11
PRDM16-201ENST00000270722 KRT33BQ14525 404 aa14.39□□□□□ -0.11
PRDM16-201ENST00000270722 ARMCX2Q7L311 632 aa14.39□□□□□ -0.11
PRDM16-201ENST00000270722 SLC7A3Q8WY07 619 aa14.39□□□□□ -0.11
PRDM16-201ENST00000270722 TBC1D32Q96NH3 1257 aa14.39□□□□□ -0.11
PRDM16-201ENST00000270722 ATP8B1O43520 1251 aa14.38□□□□□ -0.11
PRDM16-201ENST00000270722 CASP10Q92851 521 aa14.38□□□□□ -0.11
PRDM16-201ENST00000270722 RASSF10A6NK89 507 aa14.38□□□□□ -0.11
PRDM16-201ENST00000270722 MYO1EQ12965 1108 aa14.38□□□□□ -0.11
PRDM16-201ENST00000270722 TRIM58Q8NG06 486 aa14.38□□□□□ -0.11
PRDM16-201ENST00000270722 NLRP7Q8WX94 980 aa14.38□□□□□ -0.11
PRDM16-201ENST00000270722 EIF2B5Q13144 721 aaKnown RBP14.38□□□□□ -0.11
PRDM16-201ENST00000270722 CC2D2BQ6DHV5 1058 aa14.38□□□□□ -0.11
PRDM16-201ENST00000270722 POMGNT1Q8WZA1 660 aa14.38□□□□□ -0.11
PRDM16-201ENST00000270722 NPATQ14207 1427 aa14.38□□□□□ -0.11
PRDM16-201ENST00000270722 RAB14P61106 215 aa14.38□□□□□ -0.11
PRDM16-201ENST00000270722 APOA1P02647 267 aa14.38□□□□□ -0.11
PRDM16-201ENST00000270722 EFHBQ8N7U6 833 aa14.38□□□□□ -0.11
PRDM16-201ENST00000270722 CHUKO15111 745 aa14.38□□□□□ -0.11
PRDM16-201ENST00000270722 GNAT1P11488 350 aa14.38□□□□□ -0.11
PRDM16-201ENST00000270722 TXKP42681 527 aa14.38□□□□□ -0.11
PRDM16-201ENST00000270722 CAPRIN2Q6IMN6 1127 aaKnown RBP14.38□□□□□ -0.11
PRDM16-201ENST00000270722 RFWD2Q8NHY2 731 aa14.38□□□□□ -0.11
PRDM16-201ENST00000270722 DHX38Q92620 1227 aaKnown RBP14.38□□□□□ -0.11
PRDM16-201ENST00000270722 CTNND2Q9UQB3 1225 aa14.38□□□□□ -0.11
PRDM16-201ENST00000270722 KRR1Q13601 381 aaKnown RBP14.37□□□□□ -0.11
PRDM16-201ENST00000270722 MMEL1Q495T6 779 aa14.37□□□□□ -0.11
PRDM16-201ENST00000270722 MFSD14BQ5SR56 506 aa14.37□□□□□ -0.11
PRDM16-201ENST00000270722 DNAJC25Q9H1X3 360 aa14.37□□□□□ -0.11
PRDM16-201ENST00000270722 GDPD2Q9HCC8 539 aa14.37□□□□□ -0.11
PRDM16-201ENST00000270722 RNF219Q5W0B1 726 aaPredicted RBP14.37□□□□□ -0.11
PRDM16-201ENST00000270722 ZNF772Q68DY9 489 aaPredicted RBP14.37□□□□□ -0.11
PRDM16-201ENST00000270722 IP6K1Q92551 441 aa14.37□□□□□ -0.11
PRDM16-201ENST00000270722 LCMT1Q9UIC8 334 aa14.37□□□□□ -0.11
PRDM16-201ENST00000270722 USTQ9Y2C2 406 aa14.37□□□□□ -0.11
PRDM16-201ENST00000270722 ARAP1Q96P48 1450 aa14.37□□□□□ -0.11
PRDM16-201ENST00000270722 ANO1Q5XXA6 986 aa14.37□□□□□ -0.11
PRDM16-201ENST00000270722 CHST3Q7LGC8 479 aa14.37□□□□□ -0.11
PRDM16-201ENST00000270722 CEP19Q96LK0 163 aa14.37□□□□□ -0.11
PRDM16-201ENST00000270722 LRGUKQ96M69 825 aa14.37□□□□□ -0.11
PRDM16-201ENST00000270722 IFNKQ9P0W0 207 aa14.37□□□□□ -0.11
PRDM16-201ENST00000270722 FAM95CA0A1B0GW59 222 aa14.37□□□□□ -0.11
PRDM16-201ENST00000270722 ARHGAP42A6NI28 874 aa14.37□□□□□ -0.11
PRDM16-201ENST00000270722 HNRNPCL2B2RXH8 293 aa14.37□□□□□ -0.11
PRDM16-201ENST00000270722 HNRNPCL1O60812 293 aaKnown RBP14.37□□□□□ -0.11
PRDM16-201ENST00000270722 TUBA3CQ13748 450 aa14.37□□□□□ -0.11
PRDM16-201ENST00000270722 STMN3Q9NZ72 180 aa14.37□□□□□ -0.11
PRDM16-201ENST00000270722 YEATS2Q9ULM3 1422 aa14.37□□□□□ -0.11
PRDM16-201ENST00000270722 GCP02774 474 aa14.37□□□□□ -0.11
PRDM16-201ENST00000270722 CA4P22748 312 aa14.37□□□□□ -0.11
PRDM16-201ENST00000270722 GPATCH4Q5T3I0 446 aaKnown RBP14.37□□□□□ -0.11
PRDM16-201ENST00000270722 FAM178BQ8IXR5 827 aa14.37□□□□□ -0.11
PRDM16-201ENST00000270722 METTL22Q9BUU2 404 aaPredicted RBP14.37□□□□□ -0.11
PRDM16-201ENST00000270722 VPS37BQ9H9H4 285 aa14.37□□□□□ -0.11
PRDM16-201ENST00000270722 CAPN1P07384 714 aa14.37□□□□□ -0.11
PRDM16-201ENST00000270722 HPDP32754 393 aaPredicted RBP14.37□□□□□ -0.11
PRDM16-201ENST00000270722 STK38LQ9Y2H1 464 aa14.37□□□□□ -0.11
PRDM16-201ENST00000270722 HYOU1Q9Y4L1 999 aa14.37□□□□□ -0.11
PRDM16-201ENST00000270722 TESPA1A2RU30 521 aaPredicted RBP14.37□□□□□ -0.11
PRDM16-201ENST00000270722 TBCCQ15814 346 aa14.37□□□□□ -0.11
PRDM16-201ENST00000270722 FGD4Q96M96 766 aa14.37□□□□□ -0.11
PRDM16-201ENST00000270722 PAGR1Q9BTK6 254 aa14.37□□□□□ -0.11
PRDM16-201ENST00000270722 TEKT3Q9BXF9 490 aa14.37□□□□□ -0.11
PRDM16-201ENST00000270722 OLFML3Q9NRN5 406 aa14.37□□□□□ -0.11
PRDM16-201ENST00000270722 CLTAP09496 248 aa14.36□□□□□ -0.11
PRDM16-201ENST00000270722 ARHGAP44Q17R89 818 aa14.36□□□□□ -0.11
PRDM16-201ENST00000270722 TEX9Q8N6V9 391 aa14.36□□□□□ -0.11
PRDM16-201ENST00000270722 CEP70Q8NHQ1 597 aa14.36□□□□□ -0.11
PRDM16-201ENST00000270722 TUBB6Q9BUF5 446 aa14.36□□□□□ -0.11
PRDM16-201ENST00000270722 LRRC2Q9BYS8 371 aa14.36□□□□□ -0.11
PRDM16-201ENST00000270722 ARMCX3Q9UH62 379 aaPredicted RBP14.36□□□□□ -0.11
PRDM16-201ENST00000270722 ABCC1P33527 1531 aa14.36□□□□□ -0.11
PRDM16-201ENST00000270722 CHEK2O96017 543 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms