RNA–Protein interactions for RNA: ENST00000269468.9

MBD1-201, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene MBD1, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-201ENST00000269468 MAATS1Q7Z4T9 603 aa16.02■□□□□ 0.16
MBD1-201ENST00000269468 P2RX5Q93086 422 aa16.02■□□□□ 0.16
MBD1-201ENST00000269468 PPANQ9NQ55 473 aaKnown RBP16.02■□□□□ 0.16
MBD1-201ENST00000269468 TRADDQ15628 312 aa16.02■□□□□ 0.15
MBD1-201ENST00000269468 ENOX2Q16206 610 aaKnown RBP16.02■□□□□ 0.15
MBD1-201ENST00000269468 PRPF38AQ8NAV1 312 aaKnown RBP16.02■□□□□ 0.15
MBD1-201ENST00000269468 PNPLA7Q6ZV29 1317 aa16.02■□□□□ 0.15
MBD1-201ENST00000269468 ZNF233A6NK53 670 aa16.01■□□□□ 0.15
MBD1-201ENST00000269468 HEXIM1O94992 359 aaKnown RBP16.01■□□□□ 0.15
MBD1-201ENST00000269468 SSBP05455 408 aaKnown RBP eCLIP16.01■□□□□ 0.15
MBD1-201ENST00000269468 TCP1P17987 556 aaKnown RBP16.01■□□□□ 0.15
MBD1-201ENST00000269468 ATP6V1AP38606 617 aa16.01■□□□□ 0.15
MBD1-201ENST00000269468 SKOR1P84550 965 aa16.01■□□□□ 0.15
MBD1-201ENST00000269468 ZNF662Q6ZS27 426 aa16.01■□□□□ 0.15
MBD1-201ENST00000269468 GIMAP8Q8ND71 665 aaPredicted RBP16.01■□□□□ 0.15
MBD1-201ENST00000269468 TNS3Q68CZ2 1445 aa16.01■□□□□ 0.15
MBD1-201ENST00000269468 E7EVH7 732 aa16.01■□□□□ 0.15
MBD1-201ENST00000269468 HDLBPQ00341 1268 aaKnown RBP16.01■□□□□ 0.15
MBD1-201ENST00000269468 GFPT1Q06210 699 aaPredicted RBP16.01■□□□□ 0.15
MBD1-201ENST00000269468 INF2Q27J81 1249 aa16.01■□□□□ 0.15
MBD1-201ENST00000269468 TDRD12Q587J7 1177 aaKnown RBP16.01■□□□□ 0.15
MBD1-201ENST00000269468 MROH5Q6ZUA9 1318 aa16.01■□□□□ 0.15
MBD1-201ENST00000269468 CCDC194A0A1B0GVG4 234 aa16■□□□□ 0.15
MBD1-201ENST00000269468 STARD3NLO95772 234 aa16■□□□□ 0.15
MBD1-201ENST00000269468 NR1D1P20393 614 aa16■□□□□ 0.15
MBD1-201ENST00000269468 LRRC15Q8TF66 581 aa16■□□□□ 0.15
MBD1-201ENST00000269468 ATP2C2O75185 946 aa16■□□□□ 0.15
MBD1-201ENST00000269468 RDXP35241 583 aaKnown RBP16■□□□□ 0.15
MBD1-201ENST00000269468 MIIPQ5JXC2 388 aa16■□□□□ 0.15
MBD1-201ENST00000269468 IFT20Q8IY31 132 aa16■□□□□ 0.15
MBD1-201ENST00000269468 BLIDQ8IZY5 108 aa16■□□□□ 0.15
MBD1-201ENST00000269468 RETREG2Q8NC44 543 aa16■□□□□ 0.15
MBD1-201ENST00000269468 ZNF473Q8WTR7 871 aaKnown RBP16■□□□□ 0.15
MBD1-201ENST00000269468 SLC39A2Q9NP94 309 aa16■□□□□ 0.15
MBD1-201ENST00000269468 PACSIN2Q9UNF0 486 aaPredicted RBP16■□□□□ 0.15
MBD1-201ENST00000269468 USP17L12C9JPN9 530 aa16■□□□□ 0.15
MBD1-201ENST00000269468 USP17L21D6R901 530 aa16■□□□□ 0.15
MBD1-201ENST00000269468 BACH1O14867 736 aa16■□□□□ 0.15
MBD1-201ENST00000269468 FNTAP49354 379 aa16■□□□□ 0.15
MBD1-201ENST00000269468 MTMR8Q96EF0 704 aa16■□□□□ 0.15
MBD1-201ENST00000269468 KRT12Q99456 494 aa16■□□□□ 0.15
MBD1-201ENST00000269468 WTIPA6NIX2 430 aaPredicted RBP15.99■□□□□ 0.15
MBD1-201ENST00000269468 LRRC53A6NM62 1247 aa15.99■□□□□ 0.15
MBD1-201ENST00000269468 RHOBTB3O94955 611 aa15.99■□□□□ 0.15
MBD1-201ENST00000269468 FTCDO95954 541 aa15.99■□□□□ 0.15
MBD1-201ENST00000269468 EPB41P11171 864 aaKnown RBP15.99■□□□□ 0.15
MBD1-201ENST00000269468 CCNE1P24864 410 aa15.99■□□□□ 0.15
MBD1-201ENST00000269468 TRAPPC10P48553 1259 aa15.99■□□□□ 0.15
MBD1-201ENST00000269468 GSCP56915 257 aaPredicted RBP15.99■□□□□ 0.15
MBD1-201ENST00000269468 ACTN3Q08043 901 aaPredicted RBP15.99■□□□□ 0.15
MBD1-201ENST00000269468 SF3B2Q13435 895 aaKnown RBP15.99■□□□□ 0.15
MBD1-201ENST00000269468 C4orf32Q8N8J7 132 aa15.99■□□□□ 0.15
MBD1-201ENST00000269468 PROCA1Q8NCQ7 364 aaPredicted RBP15.99■□□□□ 0.15
MBD1-201ENST00000269468 MTA3Q9BTC8 594 aa15.99■□□□□ 0.15
MBD1-201ENST00000269468 EPN3Q9H201 632 aa15.99■□□□□ 0.15
MBD1-201ENST00000269468 PRDM11Q9NQV5 511 aa15.99■□□□□ 0.15
MBD1-201ENST00000269468 CALM1P0DP23 149 aa15.99■□□□□ 0.15
MBD1-201ENST00000269468 CALM2P0DP24 149 aa15.99■□□□□ 0.15
MBD1-201ENST00000269468 CALM3P0DP25 149 aa15.99■□□□□ 0.15
MBD1-201ENST00000269468 PTPROQ16827 1216 aa15.99■□□□□ 0.15
MBD1-201ENST00000269468 CEP85LQ5SZL2 805 aa15.99■□□□□ 0.15
MBD1-201ENST00000269468 ARL6IP4Q66PJ3 421 aaKnown RBP15.99■□□□□ 0.15
MBD1-201ENST00000269468 DHTKD1Q96HY7 919 aaPredicted RBP15.99■□□□□ 0.15
MBD1-201ENST00000269468 CCT8L2Q96SF2 557 aa15.99■□□□□ 0.15
MBD1-201ENST00000269468 TLR10Q9BXR5 811 aa15.99■□□□□ 0.15
MBD1-201ENST00000269468 TANGO6Q9C0B7 1094 aa15.99■□□□□ 0.15
MBD1-201ENST00000269468 NLRC4Q9NPP4 1024 aa15.99■□□□□ 0.15
MBD1-201ENST00000269468 BCCIPQ9P287 314 aaKnown RBP eCLIP15.99■□□□□ 0.15
MBD1-201ENST00000269468 KCPQ6ZWJ8 1503 aa15.99■□□□□ 0.15
MBD1-201ENST00000269468 PLCG1P19174 1290 aa15.99■□□□□ 0.15
MBD1-201ENST00000269468 SLC1A4P43007 532 aa15.99■□□□□ 0.15
MBD1-201ENST00000269468 HLTFQ14527 1009 aaKnown RBP eCLIP15.99■□□□□ 0.15
MBD1-201ENST00000269468 KCNB1Q14721 858 aa15.99■□□□□ 0.15
MBD1-201ENST00000269468 MICALCLQ6ZW33 695 aa15.99■□□□□ 0.15
MBD1-201ENST00000269468 FAM114A1Q8IWE2 563 aa15.99■□□□□ 0.15
MBD1-201ENST00000269468 KLHL7Q8IXQ5 586 aa15.99■□□□□ 0.15
MBD1-201ENST00000269468 CCDC47Q96A33 483 aaKnown RBP15.99■□□□□ 0.15
MBD1-201ENST00000269468 PPP1R37O75864 691 aa15.98■□□□□ 0.15
MBD1-201ENST00000269468 CFAP221Q4G0U5 840 aa15.98■□□□□ 0.15
MBD1-201ENST00000269468 CACNA2D4Q7Z3S7 1137 aa15.98■□□□□ 0.15
MBD1-201ENST00000269468 NLRP14Q86W24 1093 aa15.98■□□□□ 0.15
MBD1-201ENST00000269468 CCDC155Q8N6L0 562 aa15.98■□□□□ 0.15
MBD1-201ENST00000269468 GIMAP7Q8NHV1 300 aa15.98■□□□□ 0.15
MBD1-201ENST00000269468 CAVIN3Q969G5 261 aa15.98■□□□□ 0.15
MBD1-201ENST00000269468 PLAGL2Q9UPG8 496 aa15.98■□□□□ 0.15
MBD1-201ENST00000269468 PARP4Q9UKK3 1724 aaKnown RBP15.98■□□□□ 0.15
MBD1-201ENST00000269468 BICDL2A1A5D9 508 aa15.98■□□□□ 0.15
MBD1-201ENST00000269468 CCDC172P0C7W6 258 aa15.98■□□□□ 0.15
MBD1-201ENST00000269468 ATF3P18847 181 aa15.98■□□□□ 0.15
MBD1-201ENST00000269468 GYG1P46976 350 aa15.98■□□□□ 0.15
MBD1-201ENST00000269468 ARID5AQ03989 594 aa15.98■□□□□ 0.15
MBD1-201ENST00000269468 PFKFB3Q16875 520 aaPredicted RBP15.98■□□□□ 0.15
MBD1-201ENST00000269468 NOC3LQ8WTT2 800 aaKnown RBP15.98■□□□□ 0.15
MBD1-201ENST00000269468 C1orf167Q5SNV9 1468 aa15.97■□□□□ 0.15
MBD1-201ENST00000269468 PTGISQ16647 500 aa15.97■□□□□ 0.15
MBD1-201ENST00000269468 CEP57Q86XR8 500 aa15.97■□□□□ 0.15
MBD1-201ENST00000269468 OR2W6PQ8NHA6 318 aa15.97■□□□□ 0.15
MBD1-201ENST00000269468 ZBTB1Q9Y2K1 713 aa15.97■□□□□ 0.15
MBD1-201ENST00000269468 A0A0G2JS52 829 aa15.97■□□□□ 0.15
MBD1-201ENST00000269468 SF3A3Q12874 501 aaKnown RBP eCLIP15.97■□□□□ 0.153e-8■■■■■ 54.4
Retrieved 100 of 20,778 RNA–protein pairs in 161.7 ms