RNA–Protein interactions for RNA: ENST00000267935.12

COMMD4-201, Transcript of COMM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD4, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-201ENST00000267935 SLC16A2P36021 539 aa16.73■□□□□ 0.27
COMMD4-201ENST00000267935 CCL23P55773 120 aa16.73■□□□□ 0.27
COMMD4-201ENST00000267935 PDE4DQ08499 809 aa16.73■□□□□ 0.27
COMMD4-201ENST00000267935 OTOP2Q7RTS6 562 aa16.73■□□□□ 0.27
COMMD4-201ENST00000267935 IL27Q8NEV9 243 aa16.73■□□□□ 0.27
COMMD4-201ENST00000267935 TMEM47Q9BQJ4 181 aa16.73■□□□□ 0.27
COMMD4-201ENST00000267935 NOC4LQ9BVI4 516 aaKnown RBP16.73■□□□□ 0.27
COMMD4-201ENST00000267935 PRDM12Q9H4Q4 367 aa16.73■□□□□ 0.27
COMMD4-201ENST00000267935 GPCPD1Q9NPB8 672 aa16.73■□□□□ 0.27
COMMD4-201ENST00000267935 PRDM6Q9NQX0 595 aa16.73■□□□□ 0.27
COMMD4-201ENST00000267935 UNC80Q8N2C7 3258 aa16.72■□□□□ 0.27
COMMD4-201ENST00000267935 B4GALT4O60513 344 aa16.72■□□□□ 0.27
COMMD4-201ENST00000267935 ALDH5A1P51649 535 aaPredicted RBP16.72■□□□□ 0.27
COMMD4-201ENST00000267935 MFAP1P55081 439 aaKnown RBP16.72■□□□□ 0.27
COMMD4-201ENST00000267935 TTBK2Q6IQ55 1244 aa16.72■□□□□ 0.27
COMMD4-201ENST00000267935 RNF207Q6ZRF8 634 aa16.72■□□□□ 0.27
COMMD4-201ENST00000267935 MFSD6Q6ZSS7 791 aa16.72■□□□□ 0.27
COMMD4-201ENST00000267935 MTG1Q9BT17 334 aaPredicted RBP16.72■□□□□ 0.27
COMMD4-201ENST00000267935 ALDH8A1Q9H2A2 487 aaPredicted RBP16.72■□□□□ 0.27
COMMD4-201ENST00000267935 GRIN2DO15399 1336 aa16.71■□□□□ 0.27
COMMD4-201ENST00000267935 ZBBXA8MT70 800 aa16.71■□□□□ 0.27
COMMD4-201ENST00000267935 MYL3P08590 195 aa16.71■□□□□ 0.27
COMMD4-201ENST00000267935 ACTN1P12814 892 aa16.71■□□□□ 0.27
COMMD4-201ENST00000267935 CALML3P27482 149 aa16.71■□□□□ 0.27
COMMD4-201ENST00000267935 PSMC6P62333 389 aa16.71■□□□□ 0.27
COMMD4-201ENST00000267935 CCDC178Q5BJE1 867 aa16.71■□□□□ 0.27
COMMD4-201ENST00000267935 VPS53Q5VIR6 699 aa16.71■□□□□ 0.27
COMMD4-201ENST00000267935 RETREG2Q8NC44 543 aa16.71■□□□□ 0.27
COMMD4-201ENST00000267935 DNERQ8NFT8 737 aa16.71■□□□□ 0.27
COMMD4-201ENST00000267935 OR6J1Q8NGC5 347 aa16.71■□□□□ 0.27
COMMD4-201ENST00000267935 NKX2-4Q9H2Z4 354 aa16.71■□□□□ 0.27
COMMD4-201ENST00000267935 RNF41Q9H4P4 317 aaPredicted RBP16.71■□□□□ 0.27
COMMD4-201ENST00000267935 CXXC1Q9P0U4 656 aaPredicted RBP16.71■□□□□ 0.27
COMMD4-201ENST00000267935 RBM47A0AV96 593 aaKnown RBP16.7■□□□□ 0.26
COMMD4-201ENST00000267935 FOXP2O15409 715 aa16.7■□□□□ 0.26
COMMD4-201ENST00000267935 NT5C2P49902 561 aa16.7■□□□□ 0.26
COMMD4-201ENST00000267935 PDE1AP54750 535 aa16.7■□□□□ 0.26
COMMD4-201ENST00000267935 MRPS5P82675 430 aaKnown RBP16.7■□□□□ 0.26
COMMD4-201ENST00000267935 SCFD2Q8WU76 684 aa16.7■□□□□ 0.26
COMMD4-201ENST00000267935 MAF1Q9H063 256 aa16.7■□□□□ 0.26
COMMD4-201ENST00000267935 THEGQ9P2T0 379 aa16.7■□□□□ 0.26
COMMD4-201ENST00000267935 PCDHA11Q9Y5I1 949 aa16.7■□□□□ 0.26
COMMD4-201ENST00000267935 FRMPD2Q68DX3 1309 aaPredicted RBP16.7■□□□□ 0.26
COMMD4-201ENST00000267935 TRIM6-TRIM34B2RNG4 842 aa16.69■□□□□ 0.26
COMMD4-201ENST00000267935 TNFRSF10AO00220 468 aa16.69■□□□□ 0.26
COMMD4-201ENST00000267935 NFIBO00712 420 aa16.69■□□□□ 0.26
COMMD4-201ENST00000267935 HSPD1P10809 573 aaKnown RBP16.69■□□□□ 0.26
COMMD4-201ENST00000267935 RFC2P35250 354 aa16.69■□□□□ 0.26
COMMD4-201ENST00000267935 PPP2R5BQ15173 497 aa16.69■□□□□ 0.26
COMMD4-201ENST00000267935 FAM47CQ5HY64 1035 aa16.69■□□□□ 0.26
COMMD4-201ENST00000267935 GPATCH4Q5T3I0 446 aaKnown RBP16.69■□□□□ 0.26
COMMD4-201ENST00000267935 USP38Q8NB14 1042 aa16.69■□□□□ 0.26
COMMD4-201ENST00000267935 RGS22Q8NE09 1264 aa16.69■□□□□ 0.26
COMMD4-201ENST00000267935 PURBQ96QR8 312 aaKnown RBP16.69■□□□□ 0.26
COMMD4-201ENST00000267935 DDX49Q9Y6V7 483 aaKnown RBP16.69■□□□□ 0.26
COMMD4-201ENST00000267935 TNKSO95271 1327 aa16.69■□□□□ 0.26
COMMD4-201ENST00000267935 KIF28PB7ZC32 967 aa16.68■□□□□ 0.26
COMMD4-201ENST00000267935 PDHBP11177 359 aa16.68■□□□□ 0.26
COMMD4-201ENST00000267935 ATP2A2P16615 1042 aaKnown RBP16.68■□□□□ 0.26
COMMD4-201ENST00000267935 RPS6P62753 249 aaKnown RBP16.68■□□□□ 0.26
COMMD4-201ENST00000267935 PURAQ00577 322 aaKnown RBP16.68■□□□□ 0.26
COMMD4-201ENST00000267935 PTPN11Q06124 597 aaPredicted RBP16.68■□□□□ 0.26
COMMD4-201ENST00000267935 BFSP2Q13515 415 aa16.68■□□□□ 0.26
COMMD4-201ENST00000267935 TTLL4Q14679 1199 aa16.68■□□□□ 0.26
COMMD4-201ENST00000267935 CCDC85BQ15834 202 aaPredicted RBP16.68■□□□□ 0.26
COMMD4-201ENST00000267935 PPP2R2DQ66LE6 453 aa16.68■□□□□ 0.26
COMMD4-201ENST00000267935 NFRKBQ6P4R8 1299 aa16.68■□□□□ 0.26
COMMD4-201ENST00000267935 ESR2Q92731 530 aa16.68■□□□□ 0.26
COMMD4-201ENST00000267935 ASB2Q96Q27 587 aa16.68■□□□□ 0.26
COMMD4-201ENST00000267935 NOD1Q9Y239 953 aa16.68■□□□□ 0.26
COMMD4-201ENST00000267935 UMODL1Q5DID0 1318 aa16.68■□□□□ 0.26
COMMD4-201ENST00000267935 WDR19Q8NEZ3 1342 aa16.68■□□□□ 0.26
COMMD4-201ENST00000267935 SALL3Q9BXA9 1300 aa16.68■□□□□ 0.26
COMMD4-201ENST00000267935 ZNF213O14771 459 aa16.67■□□□□ 0.26
COMMD4-201ENST00000267935 TXNP10599 105 aaKnown RBP16.67■□□□□ 0.26
COMMD4-201ENST00000267935 CYP2C9P11712 490 aa16.67■□□□□ 0.26
COMMD4-201ENST00000267935 ZNF543Q08ER8 600 aa16.67■□□□□ 0.26
COMMD4-201ENST00000267935 HDAC1Q13547 482 aaPredicted RBP16.67■□□□□ 0.26
COMMD4-201ENST00000267935 NBPF20Q3BBV1 942 aa16.67■□□□□ 0.26
COMMD4-201ENST00000267935 TMEM67Q5HYA8 995 aa16.67■□□□□ 0.26
COMMD4-201ENST00000267935 TMEM63BQ5T3F8 832 aa16.67■□□□□ 0.26
COMMD4-201ENST00000267935 IQCA1Q86XH1 822 aa16.67■□□□□ 0.26
COMMD4-201ENST00000267935 DGKHQ86XP1 1220 aa16.67■□□□□ 0.26
COMMD4-201ENST00000267935 CLEC4DQ8WXI8 215 aa16.67■□□□□ 0.26
COMMD4-201ENST00000267935 RILPL2Q969X0 211 aa16.67■□□□□ 0.26
COMMD4-201ENST00000267935 SCLYQ96I15 445 aa16.67■□□□□ 0.26
COMMD4-201ENST00000267935 FAM227BQ96M60 508 aa16.67■□□□□ 0.26
COMMD4-201ENST00000267935 WNT8AQ9H1J5 351 aa16.67■□□□□ 0.26
COMMD4-201ENST00000267935 TRMT13Q9NUP7 481 aaKnown RBP16.67■□□□□ 0.26
COMMD4-201ENST00000267935 ZMYM6O95789 1325 aa16.67■□□□□ 0.26
COMMD4-201ENST00000267935 A6NJR5 290 aa16.66■□□□□ 0.26
COMMD4-201ENST00000267935 PTGS1P23219 599 aa16.66■□□□□ 0.26
COMMD4-201ENST00000267935 HAND2P61296 217 aa16.66■□□□□ 0.26
COMMD4-201ENST00000267935 AAK1Q2M2I8 961 aa16.66■□□□□ 0.26
COMMD4-201ENST00000267935 RASGRP2Q7LDG7 609 aa16.66■□□□□ 0.26
COMMD4-201ENST00000267935 DEFB128Q7Z7B8 93 aa16.66■□□□□ 0.26
COMMD4-201ENST00000267935 PHOSPHO2Q8TCD6 241 aa16.66■□□□□ 0.26
COMMD4-201ENST00000267935 FTOQ9C0B1 505 aaKnown RBP eCLIP16.66■□□□□ 0.26
COMMD4-201ENST00000267935 YBX2Q9Y2T7 364 aaKnown RBP16.66■□□□□ 0.26
COMMD4-201ENST00000267935 A0A0D9SFI3 127 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms