RNA–Protein interactions for RNA: ENST00000266743.6

SYCP3-201, Transcript of synaptonemal complex protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP3, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-201ENST00000266743 ZNF532Q9HCE3 1301 aa11.86□□□□□ -0.51
SYCP3-201ENST00000266743 SOWAHBA6NEL2 793 aa11.85□□□□□ -0.51
SYCP3-201ENST00000266743 CABYRO75952 493 aa11.85□□□□□ -0.51
SYCP3-201ENST00000266743 CHGBP05060 677 aa11.85□□□□□ -0.51
SYCP3-201ENST00000266743 NKX3-2P78367 333 aa11.85□□□□□ -0.51
SYCP3-201ENST00000266743 PTCRAQ6ISU1 281 aaPredicted RBP11.85□□□□□ -0.51
SYCP3-201ENST00000266743 HFE2Q6ZVN8 426 aa11.85□□□□□ -0.51
SYCP3-201ENST00000266743 KIFC2Q96AC6 838 aa11.85□□□□□ -0.51
SYCP3-201ENST00000266743 CLUAP1Q96AJ1 413 aa11.85□□□□□ -0.51
SYCP3-201ENST00000266743 CHMP4CQ96CF2 233 aa11.85□□□□□ -0.51
SYCP3-201ENST00000266743 SLC9A7Q96T83 725 aa11.85□□□□□ -0.51
SYCP3-201ENST00000266743 AP5M1Q9H0R1 490 aa11.85□□□□□ -0.51
SYCP3-201ENST00000266743 GOPCQ9HD26 462 aa11.85□□□□□ -0.51
SYCP3-201ENST00000266743 SWAP70Q9UH65 585 aa11.85□□□□□ -0.51
SYCP3-201ENST00000266743 COL11A1P12107 1806 aaPredicted RBP11.84□□□□□ -0.51
SYCP3-201ENST00000266743 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.84□□□□□ -0.51
SYCP3-201ENST00000266743 H3BQ06 376 aaPredicted RBP11.84□□□□□ -0.51
SYCP3-201ENST00000266743 ALADP13716 330 aa11.84□□□□□ -0.51
SYCP3-201ENST00000266743 LEXMQ3ZCV2 418 aa11.84□□□□□ -0.51
SYCP3-201ENST00000266743 FBXO16Q8IX29 292 aaPredicted RBP11.84□□□□□ -0.51
SYCP3-201ENST00000266743 PURBQ96QR8 312 aaKnown RBP11.84□□□□□ -0.51
SYCP3-201ENST00000266743 BCL11AQ9H165 835 aa11.84□□□□□ -0.51
SYCP3-201ENST00000266743 KANSL2Q9H9L4 492 aa11.84□□□□□ -0.51
SYCP3-201ENST00000266743 SUGCTQ9HAC7 445 aa11.84□□□□□ -0.51
SYCP3-201ENST00000266743 TNKSO95271 1327 aa11.84□□□□□ -0.51
SYCP3-201ENST00000266743 BRWD1Q9NSI6 2320 aa11.83□□□□□ -0.51
SYCP3-201ENST00000266743 TCRBV5S4A2TA0A5A2 114 aa11.83□□□□□ -0.52
SYCP3-201ENST00000266743 KIF28PB7ZC32 967 aa11.83□□□□□ -0.52
SYCP3-201ENST00000266743 USP17L12C9JPN9 530 aa11.83□□□□□ -0.52
SYCP3-201ENST00000266743 USP17L21D6R901 530 aa11.83□□□□□ -0.52
SYCP3-201ENST00000266743 DCXO43602 365 aa11.83□□□□□ -0.52
SYCP3-201ENST00000266743 IGSF3O75054 1194 aa11.83□□□□□ -0.52
SYCP3-201ENST00000266743 ZBED4O75132 1171 aa11.83□□□□□ -0.52
SYCP3-201ENST00000266743 NDUFB10O96000 172 aa11.83□□□□□ -0.52
SYCP3-201ENST00000266743 ACTN1P12814 892 aa11.83□□□□□ -0.52
SYCP3-201ENST00000266743 RARSP54136 660 aaKnown RBP11.83□□□□□ -0.52
SYCP3-201ENST00000266743 FAM47CQ5HY64 1035 aa11.83□□□□□ -0.52
SYCP3-201ENST00000266743 PHOSPHO2Q8TCD6 241 aa11.83□□□□□ -0.52
SYCP3-201ENST00000266743 SSH3Q8TE77 659 aa11.83□□□□□ -0.52
SYCP3-201ENST00000266743 CCDC17Q96LX7 622 aa11.83□□□□□ -0.52
SYCP3-201ENST00000266743 CTDP1Q9Y5B0 961 aaPredicted RBP11.83□□□□□ -0.52
SYCP3-201ENST00000266743 GRXCR2A6NFK2 248 aa11.82□□□□□ -0.52
SYCP3-201ENST00000266743 F5H6K3 240 aa11.82□□□□□ -0.52
SYCP3-201ENST00000266743 ANP32CO43423 234 aa11.82□□□□□ -0.52
SYCP3-201ENST00000266743 ZEB2O60315 1214 aa11.82□□□□□ -0.52
SYCP3-201ENST00000266743 MBD4O95243 580 aa11.82□□□□□ -0.52
SYCP3-201ENST00000266743 PFKMP08237 780 aa11.82□□□□□ -0.52
SYCP3-201ENST00000266743 MYL3P08590 195 aa11.82□□□□□ -0.52
SYCP3-201ENST00000266743 IQCF3P0C7M6 154 aa11.82□□□□□ -0.52
SYCP3-201ENST00000266743 TRIM27P14373 513 aa11.82□□□□□ -0.52
SYCP3-201ENST00000266743 DEFB103AP81534 67 aa11.82□□□□□ -0.52
SYCP3-201ENST00000266743 KLRC3Q07444 240 aa11.82□□□□□ -0.52
SYCP3-201ENST00000266743 TCTN1Q2MV58 587 aa11.82□□□□□ -0.52
SYCP3-201ENST00000266743 C12orf60Q5U649 245 aa11.82□□□□□ -0.52
SYCP3-201ENST00000266743 TAPT1Q6NXT6 567 aa11.82□□□□□ -0.52
SYCP3-201ENST00000266743 FAM117BQ6P1L5 589 aa11.82□□□□□ -0.52
SYCP3-201ENST00000266743 C16orf86Q6ZW13 317 aa11.82□□□□□ -0.52
SYCP3-201ENST00000266743 FAM133AQ8N9E0 248 aa11.82□□□□□ -0.52
SYCP3-201ENST00000266743 PRPF38AQ8NAV1 312 aaKnown RBP11.82□□□□□ -0.52
SYCP3-201ENST00000266743 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.82□□□□□ -0.52
SYCP3-201ENST00000266743 DNAJC2Q99543 621 aaKnown RBP11.82□□□□□ -0.52
SYCP3-201ENST00000266743 ZNF536O15090 1300 aa11.82□□□□□ -0.52
SYCP3-201ENST00000266743 PARP14Q460N5 1801 aa11.81□□□□□ -0.52
SYCP3-201ENST00000266743 GOLIM4O00461 696 aa11.81□□□□□ -0.52
SYCP3-201ENST00000266743 CHMP4BP1P59074 171 aa11.81□□□□□ -0.52
SYCP3-201ENST00000266743 SNAP25P60880 206 aa11.81□□□□□ -0.52
SYCP3-201ENST00000266743 ATP8B2P98198 1209 aa11.81□□□□□ -0.52
SYCP3-201ENST00000266743 EP400NLQ6ZTU2 488 aa11.81□□□□□ -0.52
SYCP3-201ENST00000266743 AACSQ86V21 672 aa11.81□□□□□ -0.52
SYCP3-201ENST00000266743 TRMT2AQ8IZ69 625 aaKnown RBP11.81□□□□□ -0.52
SYCP3-201ENST00000266743 PRSS33Q8NF86 280 aa11.81□□□□□ -0.52
SYCP3-201ENST00000266743 FRAT1Q92837 279 aaPredicted RBP11.81□□□□□ -0.52
SYCP3-201ENST00000266743 ZBED2Q9BTP6 218 aa11.81□□□□□ -0.52
SYCP3-201ENST00000266743 KRTAP3-3Q9BYR6 98 aa11.81□□□□□ -0.52
SYCP3-201ENST00000266743 KRTAP3-2Q9BYR7 98 aa11.81□□□□□ -0.52
SYCP3-201ENST00000266743 SLC38A10Q9HBR0 1119 aa11.81□□□□□ -0.52
SYCP3-201ENST00000266743 A1CFQ9NQ94 594 aaKnown RBP11.81□□□□□ -0.52
SYCP3-201ENST00000266743 NAV1Q8NEY1 1877 aa11.8□□□□□ -0.52
SYCP3-201ENST00000266743 ATP2A1O14983 1001 aa11.8□□□□□ -0.52
SYCP3-201ENST00000266743 WDR5P61964 334 aaKnown RBP11.8□□□□□ -0.52
SYCP3-201ENST00000266743 GPNMBQ14956 572 aa11.8□□□□□ -0.52
SYCP3-201ENST00000266743 NBPF20Q3BBV1 942 aa11.8□□□□□ -0.52
SYCP3-201ENST00000266743 KIAA1211Q6ZU35 1233 aa11.8□□□□□ -0.52
SYCP3-201ENST00000266743 CHST13Q8NET6 341 aa11.8□□□□□ -0.52
SYCP3-201ENST00000266743 IL1RAPL2Q9NP60 686 aa11.8□□□□□ -0.52
SYCP3-201ENST00000266743 CLIP2Q9UDT6 1046 aa11.8□□□□□ -0.52
SYCP3-201ENST00000266743 MCM3APO60318 1980 aa11.79□□□□□ -0.52
SYCP3-201ENST00000266743 SCN5AQ14524 2016 aa11.79□□□□□ -0.52
SYCP3-201ENST00000266743 COL4A4P53420 1690 aaPredicted RBP11.79□□□□□ -0.52
SYCP3-201ENST00000266743 LINC01553A4QN01 128 aa11.79□□□□□ -0.52
SYCP3-201ENST00000266743 ARHGAP33O14559 1287 aa11.79□□□□□ -0.52
SYCP3-201ENST00000266743 SUPT20HL2P0C7V6 817 aa11.79□□□□□ -0.52
SYCP3-201ENST00000266743 KCNJ6P48051 423 aa11.79□□□□□ -0.52
SYCP3-201ENST00000266743 FOSBP53539 338 aa11.79□□□□□ -0.52
SYCP3-201ENST00000266743 PURAQ00577 322 aaKnown RBP11.79□□□□□ -0.52
SYCP3-201ENST00000266743 ZP2Q05996 745 aa11.79□□□□□ -0.52
SYCP3-201ENST00000266743 CTR9Q6PD62 1173 aa11.79□□□□□ -0.52
SYCP3-201ENST00000266743 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.79□□□□□ -0.52
SYCP3-201ENST00000266743 LRRC47Q8N1G4 583 aaKnown RBP11.79□□□□□ -0.52
SYCP3-201ENST00000266743 TMEM57Q8N5G2 664 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms