RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 HPCAL4Q9UM19 191 aa18.74■□□□□ 0.59
SQLE-201ENST00000265896 PAPPAQ13219 1627 aa18.73■□□□□ 0.59
SQLE-201ENST00000265896 AKR1B10O60218 316 aa18.73■□□□□ 0.59
SQLE-201ENST00000265896 EIF4A3P38919 411 aaKnown RBP18.73■□□□□ 0.59
SQLE-201ENST00000265896 RCAN1P53805 252 aa18.73■□□□□ 0.59
SQLE-201ENST00000265896 KIF5AQ12840 1032 aa18.73■□□□□ 0.59
SQLE-201ENST00000265896 GOLGA6L1Q8N7Z2 621 aa18.73■□□□□ 0.59
SQLE-201ENST00000265896 GIMAP8Q8ND71 665 aaPredicted RBP18.73■□□□□ 0.59
SQLE-201ENST00000265896 TBCKQ8TEA7 893 aa18.73■□□□□ 0.59
SQLE-201ENST00000265896 POTEB2H3BUK9 544 aa18.73■□□□□ 0.59
SQLE-201ENST00000265896 CALML3P27482 149 aa18.73■□□□□ 0.59
SQLE-201ENST00000265896 RASSF7Q02833 373 aa18.73■□□□□ 0.59
SQLE-201ENST00000265896 SMARCC1Q92922 1105 aaPredicted RBP18.73■□□□□ 0.59
SQLE-201ENST00000265896 IFIH1Q9BYX4 1025 aaKnown RBP18.73■□□□□ 0.59
SQLE-201ENST00000265896 PDS5AQ29RF7 1337 aaKnown RBP18.73■□□□□ 0.59
SQLE-201ENST00000265896 STXBP3O00186 592 aa18.72■□□□□ 0.59
SQLE-201ENST00000265896 PSMD14O00487 310 aa18.72■□□□□ 0.59
SQLE-201ENST00000265896 DNM2P50570 870 aa18.72■□□□□ 0.59
SQLE-201ENST00000265896 MIIPQ5JXC2 388 aa18.72■□□□□ 0.59
SQLE-201ENST00000265896 SECISBP2LQ93073 1101 aaKnown RBP18.72■□□□□ 0.59
SQLE-201ENST00000265896 RASSF4Q9H2L5 321 aa18.72■□□□□ 0.59
SQLE-201ENST00000265896 GOLPH3Q9H4A6 298 aa18.72■□□□□ 0.59
SQLE-201ENST00000265896 ARHGAP20Q9P2F6 1191 aa18.72■□□□□ 0.59
SQLE-201ENST00000265896 DUOX1Q9NRD9 1551 aa18.72■□□□□ 0.59
SQLE-201ENST00000265896 DCCP43146 1447 aa18.72■□□□□ 0.59
SQLE-201ENST00000265896 F8W031 263 aaPredicted RBP18.72■□□□□ 0.59
SQLE-201ENST00000265896 TDP2O95551 362 aa18.72■□□□□ 0.59
SQLE-201ENST00000265896 SRGNP10124 158 aa18.72■□□□□ 0.59
SQLE-201ENST00000265896 TDRD12Q587J7 1177 aaKnown RBP18.72■□□□□ 0.59
SQLE-201ENST00000265896 FBXO33Q7Z6M2 555 aa18.72■□□□□ 0.59
SQLE-201ENST00000265896 ZHX3Q9H4I2 956 aa18.72■□□□□ 0.59
SQLE-201ENST00000265896 KBTBD4Q9NVX7 518 aa18.72■□□□□ 0.59
SQLE-201ENST00000265896 FECHP22830 423 aa18.72■□□□□ 0.59
SQLE-201ENST00000265896 CYLC1P35663 651 aaPredicted RBP18.72■□□□□ 0.59
SQLE-201ENST00000265896 SPA17Q15506 151 aa18.72■□□□□ 0.59
SQLE-201ENST00000265896 NELFCDQ8IXH7 590 aa18.72■□□□□ 0.59
SQLE-201ENST00000265896 LRRC47Q8N1G4 583 aaKnown RBP18.72■□□□□ 0.59
SQLE-201ENST00000265896 AFAP1L1Q8TED9 768 aa18.72■□□□□ 0.59
SQLE-201ENST00000265896 ORC4O43929 436 aa18.71■□□□□ 0.59
SQLE-201ENST00000265896 TRIM14Q14142 442 aa18.71■□□□□ 0.59
SQLE-201ENST00000265896 TRADDQ15628 312 aa18.71■□□□□ 0.59
SQLE-201ENST00000265896 SH2D3CQ8N5H7 860 aa18.71■□□□□ 0.59
SQLE-201ENST00000265896 CWC15Q9P013 229 aaKnown RBP18.71■□□□□ 0.59
SQLE-201ENST00000265896 ITGB4P16144 1822 aa18.71■□□□□ 0.59
SQLE-201ENST00000265896 LRRC53A6NM62 1247 aa18.71■□□□□ 0.59
SQLE-201ENST00000265896 TRAPPC10P48553 1259 aa18.71■□□□□ 0.59
SQLE-201ENST00000265896 PICALMQ13492 652 aa18.71■□□□□ 0.59
SQLE-201ENST00000265896 MUM1L1Q5H9M0 696 aa18.71■□□□□ 0.59
SQLE-201ENST00000265896 KCNK18Q7Z418 384 aa18.71■□□□□ 0.59
SQLE-201ENST00000265896 FAM71BQ8TC56 605 aa18.71■□□□□ 0.59
SQLE-201ENST00000265896 MTA3Q9BTC8 594 aa18.71■□□□□ 0.59
SQLE-201ENST00000265896 SAMM50Q9Y512 469 aa18.71■□□□□ 0.59
SQLE-201ENST00000265896 PCNTO95613 3336 aa18.7■□□□□ 0.58
SQLE-201ENST00000265896 MYH10P35580 1976 aa18.7■□□□□ 0.58
SQLE-201ENST00000265896 RHOBTB3O94955 611 aa18.7■□□□□ 0.58
SQLE-201ENST00000265896 OR52Z1P0C646 297 aa18.7■□□□□ 0.58
SQLE-201ENST00000265896 ATP1A2P50993 1020 aa18.7■□□□□ 0.58
SQLE-201ENST00000265896 KRT83P78385 493 aa18.7■□□□□ 0.58
SQLE-201ENST00000265896 C12orf60Q5U649 245 aa18.7■□□□□ 0.58
SQLE-201ENST00000265896 ARL6IP4Q66PJ3 421 aaKnown RBP18.7■□□□□ 0.58
SQLE-201ENST00000265896 IFT81Q8WYA0 676 aa18.7■□□□□ 0.58
SQLE-201ENST00000265896 NLRP3Q96P20 1036 aa18.7■□□□□ 0.58
SQLE-201ENST00000265896 ZNF652Q9Y2D9 606 aa18.7■□□□□ 0.58
SQLE-201ENST00000265896 AGPSO00116 658 aa18.7■□□□□ 0.58
SQLE-201ENST00000265896 SLC37A4O43826 429 aa18.7■□□□□ 0.58
SQLE-201ENST00000265896 LDHBP07195 334 aaKnown RBP18.7■□□□□ 0.58
SQLE-201ENST00000265896 EEF1GP26641 437 aaKnown RBP18.7■□□□□ 0.58
SQLE-201ENST00000265896 UBE2SQ16763 222 aa18.7■□□□□ 0.58
SQLE-201ENST00000265896 FGFBP2Q9BYJ0 223 aa18.7■□□□□ 0.58
SQLE-201ENST00000265896 GBP3Q9H0R5 595 aa18.7■□□□□ 0.58
SQLE-201ENST00000265896 GPCPD1Q9NPB8 672 aa18.7■□□□□ 0.58
SQLE-201ENST00000265896 ATP8A2Q9NTI2 1148 aa18.7■□□□□ 0.58
SQLE-201ENST00000265896 ARPP21Q9UBL0 812 aaPredicted RBP18.7■□□□□ 0.58
SQLE-201ENST00000265896 MYMKA6NI61 221 aa18.69■□□□□ 0.58
SQLE-201ENST00000265896 USP17L5A8MUK1 530 aa18.69■□□□□ 0.58
SQLE-201ENST00000265896 FGRP09769 529 aa18.69■□□□□ 0.58
SQLE-201ENST00000265896 MMTAG2Q9BU76 263 aaKnown RBP18.69■□□□□ 0.58
SQLE-201ENST00000265896 FTCDO95954 541 aa18.69■□□□□ 0.58
SQLE-201ENST00000265896 CCNE1P24864 410 aa18.69■□□□□ 0.58
SQLE-201ENST00000265896 KIF11P52732 1056 aa18.69■□□□□ 0.58
SQLE-201ENST00000265896 TTYH3Q9C0H2 523 aa18.69■□□□□ 0.58
SQLE-201ENST00000265896 THAP9Q9H5L6 903 aa18.69■□□□□ 0.58
SQLE-201ENST00000265896 BARHL2Q9NY43 387 aa18.69■□□□□ 0.58
SQLE-201ENST00000265896 PCDHA13Q9Y5I0 950 aa18.69■□□□□ 0.58
SQLE-201ENST00000265896 FLT1P17948 1338 aa18.69■□□□□ 0.58
SQLE-201ENST00000265896 BCL9LQ86UU0 1499 aa18.69■□□□□ 0.58
SQLE-201ENST00000265896 NPHP3-ACAD11A0A0J9YXS1 232 aa18.69■□□□□ 0.58
SQLE-201ENST00000265896 CCT5P48643 541 aa18.69■□□□□ 0.58
SQLE-201ENST00000265896 TNNI2P48788 182 aa18.69■□□□□ 0.58
SQLE-201ENST00000265896 GUCY2FP51841 1108 aa18.69■□□□□ 0.58
SQLE-201ENST00000265896 CCDC181Q5TID7 509 aa18.69■□□□□ 0.58
SQLE-201ENST00000265896 MYH14Q7Z406 1995 aaKnown RBP18.68■□□□□ 0.58
SQLE-201ENST00000265896 TIAM2Q8IVF5 1701 aa18.68■□□□□ 0.58
SQLE-201ENST00000265896 GOLGA6BA6NDN3 693 aa18.68■□□□□ 0.58
SQLE-201ENST00000265896 SLC1A4P43007 532 aa18.68■□□□□ 0.58
SQLE-201ENST00000265896 ZBED6P86452 979 aa18.68■□□□□ 0.58
SQLE-201ENST00000265896 FAM98CQ17RN3 349 aaKnown RBP18.68■□□□□ 0.58
SQLE-201ENST00000265896 CT47A1Q5JQC4 288 aaPredicted RBP18.68■□□□□ 0.58
SQLE-201ENST00000265896 SETDB2Q96T68 719 aa18.68■□□□□ 0.58
SQLE-201ENST00000265896 MYO1AQ9UBC5 1043 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms