RNA–Protein interactions for RNA: ENST00000265421.8

POLB-201, Transcript of DNA polymerase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLB, Length 1,329 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-201ENST00000265421 DOCK3Q8IZD9 2030 aa12.86□□□□□ -0.35
POLB-201ENST00000265421 EPB41L2O43491 1005 aaKnown RBP12.86□□□□□ -0.35
POLB-201ENST00000265421 PRC1O43663 620 aa12.86□□□□□ -0.35
POLB-201ENST00000265421 DDAH1O94760 285 aa12.86□□□□□ -0.35
POLB-201ENST00000265421 CALML3P27482 149 aa12.86□□□□□ -0.35
POLB-201ENST00000265421 CHRDL2Q6WN34 429 aa12.86□□□□□ -0.35
POLB-201ENST00000265421 NUP133Q8WUM0 1156 aa12.86□□□□□ -0.35
POLB-201ENST00000265421 LZTS2Q9BRK4 669 aa12.86□□□□□ -0.35
POLB-201ENST00000265421 PPP4R2Q9NY27 417 aa12.86□□□□□ -0.35
POLB-201ENST00000265421 ELP1O95163 1332 aa12.85□□□□□ -0.35
POLB-201ENST00000265421 SYNRGQ9UMZ2 1314 aa12.85□□□□□ -0.35
POLB-201ENST00000265421 PNMA6FA0A0J9YX94 578 aa12.85□□□□□ -0.35
POLB-201ENST00000265421 SH2B2O14492 632 aaPredicted RBP12.85□□□□□ -0.35
POLB-201ENST00000265421 CTAGE5O15320 804 aa12.85□□□□□ -0.35
POLB-201ENST00000265421 ADCY6O43306 1168 aa12.85□□□□□ -0.35
POLB-201ENST00000265421 CYTH3O43739 400 aa12.85□□□□□ -0.35
POLB-201ENST00000265421 DHX16O60231 1041 aaKnown RBP12.85□□□□□ -0.35
POLB-201ENST00000265421 SMPD1P17405 629 aa12.85□□□□□ -0.35
POLB-201ENST00000265421 KIF5BP33176 963 aa12.85□□□□□ -0.35
POLB-201ENST00000265421 GNAQP50148 359 aa12.85□□□□□ -0.35
POLB-201ENST00000265421 ACLYP53396 1101 aa12.85□□□□□ -0.35
POLB-201ENST00000265421 ATN1P54259 1190 aaPredicted RBP12.85□□□□□ -0.35
POLB-201ENST00000265421 EXOSC10Q01780 885 aaKnown RBP12.85□□□□□ -0.35
POLB-201ENST00000265421 KRT32Q14532 448 aa12.85□□□□□ -0.35
POLB-201ENST00000265421 KCNA10Q16322 511 aa12.85□□□□□ -0.35
POLB-201ENST00000265421 SLC35G1Q2M3R5 365 aa12.85□□□□□ -0.35
POLB-201ENST00000265421 USH1GQ495M9 461 aa12.85□□□□□ -0.35
POLB-201ENST00000265421 SLC30A10Q6XR72 485 aa12.85□□□□□ -0.35
POLB-201ENST00000265421 SGMS1Q86VZ5 419 aa12.85□□□□□ -0.35
POLB-201ENST00000265421 SYTL5Q8TDW5 730 aaPredicted RBP12.85□□□□□ -0.35
POLB-201ENST00000265421 NSUN6Q8TEA1 469 aaKnown RBP12.85□□□□□ -0.35
POLB-201ENST00000265421 TBC1D5Q92609 795 aa12.85□□□□□ -0.35
POLB-201ENST00000265421 TOX2Q96NM4 488 aa12.85□□□□□ -0.35
POLB-201ENST00000265421 NEK1Q96PY6 1258 aa12.85□□□□□ -0.35
POLB-201ENST00000265421 IWS1Q96ST2 819 aa12.85□□□□□ -0.35
POLB-201ENST00000265421 RBM27Q9P2N5 1060 aaKnown RBP12.85□□□□□ -0.35
POLB-201ENST00000265421 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.84□□□□□ -0.35
POLB-201ENST00000265421 A0A1W2PQ45 241 aaPredicted RBP12.84□□□□□ -0.35
POLB-201ENST00000265421 A0A1W2PQY0 241 aa12.84□□□□□ -0.35
POLB-201ENST00000265421 PPP1R11O60927 126 aaPredicted RBP12.84□□□□□ -0.35
POLB-201ENST00000265421 HMGB1P09429 215 aaKnown RBP12.84□□□□□ -0.35
POLB-201ENST00000265421 CALM1P0DP23 149 aa12.84□□□□□ -0.35
POLB-201ENST00000265421 CALM2P0DP24 149 aa12.84□□□□□ -0.35
POLB-201ENST00000265421 CALM3P0DP25 149 aa12.84□□□□□ -0.35
POLB-201ENST00000265421 HSD17B4P51659 736 aa12.84□□□□□ -0.35
POLB-201ENST00000265421 RTP1P59025 263 aa12.84□□□□□ -0.35
POLB-201ENST00000265421 DUSP28Q4G0W2 176 aa12.84□□□□□ -0.35
POLB-201ENST00000265421 GNASQ5JWF2 1037 aa12.84□□□□□ -0.35
POLB-201ENST00000265421 DHX32Q7L7V1 743 aaKnown RBP12.84□□□□□ -0.35
POLB-201ENST00000265421 ANKRD33Q7Z3H0 272 aa12.84□□□□□ -0.35
POLB-201ENST00000265421 RASEFQ8IZ41 740 aa12.84□□□□□ -0.35
POLB-201ENST00000265421 ZNF654Q8IZM8 581 aa12.84□□□□□ -0.35
POLB-201ENST00000265421 FERMT2Q96AC1 680 aa12.84□□□□□ -0.35
POLB-201ENST00000265421 LENG1Q96BZ8 264 aaPredicted RBP12.84□□□□□ -0.35
POLB-201ENST00000265421 SPZ1Q9BXG8 430 aa12.84□□□□□ -0.35
POLB-201ENST00000265421 GPHNQ9NQX3 736 aaPredicted RBP12.84□□□□□ -0.35
POLB-201ENST00000265421 PDGFCQ9NRA1 345 aa12.84□□□□□ -0.35
POLB-201ENST00000265421 ZMYND8Q9ULU4 1186 aaPredicted RBP12.84□□□□□ -0.35
POLB-201ENST00000265421 PCDHA1Q9Y5I3 950 aa12.84□□□□□ -0.35
POLB-201ENST00000265421 PDE4DIPQ5VU43 2346 aa12.83□□□□□ -0.36
POLB-201ENST00000265421 CCDC69A6NI79 296 aa12.83□□□□□ -0.36
POLB-201ENST00000265421 OPLAHO14841 1288 aa12.83□□□□□ -0.36
POLB-201ENST00000265421 NKRFO15226 690 aaKnown RBP eCLIP12.83□□□□□ -0.36
POLB-201ENST00000265421 CABYRO75952 493 aa12.83□□□□□ -0.36
POLB-201ENST00000265421 CENPBP07199 599 aaPredicted RBP12.83□□□□□ -0.36
POLB-201ENST00000265421 ASGR1P07306 291 aa12.83□□□□□ -0.36
POLB-201ENST00000265421 C6orf222P0C671 652 aaPredicted RBP12.83□□□□□ -0.36
POLB-201ENST00000265421 CDK7P50613 346 aa12.83□□□□□ -0.36
POLB-201ENST00000265421 PDE4DQ08499 809 aa12.83□□□□□ -0.36
POLB-201ENST00000265421 COL9A3Q14050 684 aaPredicted RBP12.83□□□□□ -0.36
POLB-201ENST00000265421 FBXO16Q8IX29 292 aaPredicted RBP12.83□□□□□ -0.36
POLB-201ENST00000265421 CTCFLQ8NI51 663 aaPredicted RBP12.83□□□□□ -0.36
POLB-201ENST00000265421 GLT1D1Q96MS3 346 aa12.83□□□□□ -0.36
POLB-201ENST00000265421 TAAR1Q96RJ0 339 aa12.83□□□□□ -0.36
POLB-201ENST00000265421 PIGSQ96S52 555 aa12.83□□□□□ -0.36
POLB-201ENST00000265421 SEZ6LQ9BYH1 1024 aa12.83□□□□□ -0.36
POLB-201ENST00000265421 WDR11Q9BZH6 1224 aa12.83□□□□□ -0.36
POLB-201ENST00000265421 SLC12A7Q9Y666 1083 aa12.83□□□□□ -0.36
POLB-201ENST00000265421 MYADML2A6NDP7 307 aa12.82□□□□□ -0.36
POLB-201ENST00000265421 DYNC1LI2O43237 492 aaPredicted RBP12.82□□□□□ -0.36
POLB-201ENST00000265421 ZEB2O60315 1214 aa12.82□□□□□ -0.36
POLB-201ENST00000265421 REC8O95072 547 aa12.82□□□□□ -0.36
POLB-201ENST00000265421 SYN1P17600 705 aa12.82□□□□□ -0.36
POLB-201ENST00000265421 HSPA4P34932 840 aa12.82□□□□□ -0.36
POLB-201ENST00000265421 TRIM60Q495X7 471 aa12.82□□□□□ -0.36
POLB-201ENST00000265421 NFXL1Q6ZNB6 911 aa12.82□□□□□ -0.36
POLB-201ENST00000265421 NOL8Q76FK4 1167 aaKnown RBP12.82□□□□□ -0.36
POLB-201ENST00000265421 EEPD1Q7L9B9 569 aa12.82□□□□□ -0.36
POLB-201ENST00000265421 FBXL16Q8N461 479 aa12.82□□□□□ -0.36
POLB-201ENST00000265421 FANCBQ8NB91 859 aa12.82□□□□□ -0.36
POLB-201ENST00000265421 SCFD2Q8WU76 684 aa12.82□□□□□ -0.36
POLB-201ENST00000265421 RMDN3Q96TC7 470 aa12.82□□□□□ -0.36
POLB-201ENST00000265421 AP5M1Q9H0R1 490 aa12.82□□□□□ -0.36
POLB-201ENST00000265421 STARD7Q9NQZ5 370 aa12.82□□□□□ -0.36
POLB-201ENST00000265421 COL20A1Q9P218 1284 aa12.82□□□□□ -0.36
POLB-201ENST00000265421 ATP11BQ9Y2G3 1177 aa12.82□□□□□ -0.36
POLB-201ENST00000265421 DDX49Q9Y6V7 483 aaKnown RBP12.82□□□□□ -0.36
POLB-201ENST00000265421 EIF3JO75822 258 aaKnown RBP12.81□□□□□ -0.36
POLB-201ENST00000265421 SLC34A2O95436 690 aa12.81□□□□□ -0.36
POLB-201ENST00000265421 MAGEA10P43363 369 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms