RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 SLC16A2P36021 539 aa18.45■□□□□ 0.54
PHRF1-201ENST00000264555 ARHGEF16Q5VV41 709 aa18.45■□□□□ 0.54
PHRF1-201ENST00000264555 DCAF15Q66K64 600 aa18.45■□□□□ 0.54
PHRF1-201ENST00000264555 IQCGQ9H095 443 aaKnown RBP18.45■□□□□ 0.54
PHRF1-201ENST00000264555 MYO1AQ9UBC5 1043 aa18.45■□□□□ 0.54
PHRF1-201ENST00000264555 GOLGA6BA6NDN3 693 aa18.45■□□□□ 0.54
PHRF1-201ENST00000264555 CYP2D6P10635 497 aa18.45■□□□□ 0.54
PHRF1-201ENST00000264555 GNPTABQ3T906 1256 aa18.45■□□□□ 0.54
PHRF1-201ENST00000264555 BPIFA3Q9BQP9 254 aa18.45■□□□□ 0.54
PHRF1-201ENST00000264555 ARHGEF28Q8N1W1 1705 aaKnown RBP18.45■□□□□ 0.54
PHRF1-201ENST00000264555 KLHL7Q8IXQ5 586 aa18.44■□□□□ 0.54
PHRF1-201ENST00000264555 UBE2Q2Q8WVN8 375 aa18.44■□□□□ 0.54
PHRF1-201ENST00000264555 PDLIM2Q96JY6 352 aa18.44■□□□□ 0.54
PHRF1-201ENST00000264555 SMIM23A6NLE4 172 aa18.44■□□□□ 0.54
PHRF1-201ENST00000264555 ADRA2BP18089 450 aa18.44■□□□□ 0.54
PHRF1-201ENST00000264555 PAIP2Q9BPZ3 127 aaKnown RBP18.44■□□□□ 0.54
PHRF1-201ENST00000264555 UBN2Q6ZU65 1347 aa18.44■□□□□ 0.54
PHRF1-201ENST00000264555 TESPA1A2RU30 521 aaPredicted RBP18.44■□□□□ 0.54
PHRF1-201ENST00000264555 A6NNZ2 444 aa18.44■□□□□ 0.54
PHRF1-201ENST00000264555 TUBB8Q3ZCM7 444 aa18.44■□□□□ 0.54
PHRF1-201ENST00000264555 EEF2KMTQ96G04 330 aa18.44■□□□□ 0.54
PHRF1-201ENST00000264555 PNMA6FA0A0J9YX94 578 aa18.44■□□□□ 0.54
PHRF1-201ENST00000264555 TCP1P17987 556 aaKnown RBP18.44■□□□□ 0.54
PHRF1-201ENST00000264555 CYP4A11Q02928 519 aa18.44■□□□□ 0.54
PHRF1-201ENST00000264555 GOLGA8FQ08AF8 430 aa18.44■□□□□ 0.54
PHRF1-201ENST00000264555 GOLGA8DPQ0D2H9 430 aa18.44■□□□□ 0.54
PHRF1-201ENST00000264555 FNBP4Q8N3X1 1017 aaPredicted RBP18.44■□□□□ 0.54
PHRF1-201ENST00000264555 U2AF1L4Q8WU68 220 aaKnown RBP18.44■□□□□ 0.54
PHRF1-201ENST00000264555 N4BP1O75113 896 aaKnown RBP18.43■□□□□ 0.54
PHRF1-201ENST00000264555 ZNF34Q8IZ26 560 aa18.43■□□□□ 0.54
PHRF1-201ENST00000264555 THAP9Q9H5L6 903 aa18.43■□□□□ 0.54
PHRF1-201ENST00000264555 PHLPP2Q6ZVD8 1323 aa18.43■□□□□ 0.54
PHRF1-201ENST00000264555 GOLGA6CA6NDK9 693 aa18.43■□□□□ 0.54
PHRF1-201ENST00000264555 GOLGA6DP0CG33 693 aa18.43■□□□□ 0.54
PHRF1-201ENST00000264555 ATP1A3P13637 1013 aa18.43■□□□□ 0.54
PHRF1-201ENST00000264555 GPR101Q96P66 508 aaPredicted RBP18.43■□□□□ 0.54
PHRF1-201ENST00000264555 PLCD4Q9BRC7 762 aa18.43■□□□□ 0.54
PHRF1-201ENST00000264555 DISC1Q9NRI5 854 aa18.43■□□□□ 0.54
PHRF1-201ENST00000264555 GOLGA6AQ9NYA3 693 aa18.43■□□□□ 0.54
PHRF1-201ENST00000264555 CPLX4Q7Z7G2 160 aa18.43■□□□□ 0.54
PHRF1-201ENST00000264555 CCPG1Q9ULG6 757 aa18.43■□□□□ 0.54
PHRF1-201ENST00000264555 BMP3P12645 472 aa18.43■□□□□ 0.54
PHRF1-201ENST00000264555 PLCG1P19174 1290 aa18.42■□□□□ 0.54
PHRF1-201ENST00000264555 CCNE1P24864 410 aa18.42■□□□□ 0.54
PHRF1-201ENST00000264555 CEP128Q6ZU80 1094 aa18.42■□□□□ 0.54
PHRF1-201ENST00000264555 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.42■□□□□ 0.54
PHRF1-201ENST00000264555 FAM84BQ96KN1 310 aaPredicted RBP18.42■□□□□ 0.54
PHRF1-201ENST00000264555 SEPT2Q15019 361 aa18.42■□□□□ 0.54
PHRF1-201ENST00000264555 FAM102BQ5T8I3 360 aa18.42■□□□□ 0.54
PHRF1-201ENST00000264555 SPICE1Q8N0Z3 855 aa18.42■□□□□ 0.54
PHRF1-201ENST00000264555 CDC23Q9UJX2 597 aa18.42■□□□□ 0.54
PHRF1-201ENST00000264555 AMFRQ9UKV5 643 aa18.42■□□□□ 0.54
PHRF1-201ENST00000264555 K7ENM7 598 aa18.42■□□□□ 0.54
PHRF1-201ENST00000264555 LRCH2Q5VUJ6 765 aa18.42■□□□□ 0.54
PHRF1-201ENST00000264555 ATP2A2P16615 1042 aaKnown RBP18.42■□□□□ 0.54
PHRF1-201ENST00000264555 FKBP3Q00688 224 aaKnown RBP18.42■□□□□ 0.54
PHRF1-201ENST00000264555 MAN2A1Q16706 1144 aa18.42■□□□□ 0.54
PHRF1-201ENST00000264555 SND1Q7KZF4 910 aaKnown RBP eCLIP18.42■□□□□ 0.54
PHRF1-201ENST00000264555 DAAM2Q86T65 1068 aa18.42■□□□□ 0.54
PHRF1-201ENST00000264555 PPP1R14CQ8TAE6 165 aa18.42■□□□□ 0.54
PHRF1-201ENST00000264555 ARHGEF1Q92888 912 aaKnown RBP18.42■□□□□ 0.54
PHRF1-201ENST00000264555 CD209Q9NNX6 404 aa18.42■□□□□ 0.54
PHRF1-201ENST00000264555 ATP2C2O75185 946 aa18.42■□□□□ 0.54
PHRF1-201ENST00000264555 PANX2Q96RD6 677 aa18.42■□□□□ 0.54
PHRF1-201ENST00000264555 TMEM47Q9BQJ4 181 aa18.42■□□□□ 0.54
PHRF1-201ENST00000264555 IL25Q9H293 177 aa18.42■□□□□ 0.54
PHRF1-201ENST00000264555 OAS2P29728 719 aaKnown RBP18.41■□□□□ 0.54
PHRF1-201ENST00000264555 PSMD2Q13200 908 aa18.41■□□□□ 0.54
PHRF1-201ENST00000264555 PABPC4Q13310 644 aaKnown RBP eCLIP18.41■□□□□ 0.54
PHRF1-201ENST00000264555 PRKG1Q13976 671 aa18.41■□□□□ 0.54
PHRF1-201ENST00000264555 FOXP4Q8IVH2 680 aaPredicted RBP18.41■□□□□ 0.54
PHRF1-201ENST00000264555 FAM184BQ9ULE4 1060 aa18.41■□□□□ 0.54
PHRF1-201ENST00000264555 KIF20BQ96Q89 1820 aa18.41■□□□□ 0.54
PHRF1-201ENST00000264555 GDF11O95390 407 aa18.41■□□□□ 0.54
PHRF1-201ENST00000264555 CCDC121Q6ZUS5 278 aa18.41■□□□□ 0.54
PHRF1-201ENST00000264555 EXOC3L4Q17RC7 722 aa18.41■□□□□ 0.54
PHRF1-201ENST00000264555 XKR9Q5GH70 373 aa18.41■□□□□ 0.54
PHRF1-201ENST00000264555 MAK16Q9BXY0 300 aaKnown RBP18.41■□□□□ 0.54
PHRF1-201ENST00000264555 GAP43P17677 238 aa18.41■□□□□ 0.54
PHRF1-201ENST00000264555 PTPN21Q16825 1174 aa18.41■□□□□ 0.54
PHRF1-201ENST00000264555 KMT5BQ4FZB7 885 aa18.41■□□□□ 0.54
PHRF1-201ENST00000264555 OXER1Q8TDS5 423 aa18.41■□□□□ 0.54
PHRF1-201ENST00000264555 RABGGTAQ92696 567 aa18.41■□□□□ 0.54
PHRF1-201ENST00000264555 TSNARE1Q96NA8 513 aa18.41■□□□□ 0.54
PHRF1-201ENST00000264555 CLRN2A0PK11 232 aa18.4■□□□□ 0.54
PHRF1-201ENST00000264555 RUFY4Q6ZNE9 571 aa18.4■□□□□ 0.54
PHRF1-201ENST00000264555 ZNF365Q70YC5 407 aa18.4■□□□□ 0.54
PHRF1-201ENST00000264555 OTUD6BQ8N6M0 293 aa18.4■□□□□ 0.54
PHRF1-201ENST00000264555 GIMAP7Q8NHV1 300 aa18.4■□□□□ 0.54
PHRF1-201ENST00000264555 BZW2Q9Y6E2 419 aaKnown RBP18.4■□□□□ 0.54
PHRF1-201ENST00000264555 KCNQ2O43526 872 aa18.4■□□□□ 0.54
PHRF1-201ENST00000264555 ORC4O43929 436 aa18.4■□□□□ 0.54
PHRF1-201ENST00000264555 NR2F2P24468 414 aa18.4■□□□□ 0.54
PHRF1-201ENST00000264555 ATP5DP30049 168 aa18.4■□□□□ 0.54
PHRF1-201ENST00000264555 NKX1-1Q15270 411 aaPredicted RBP18.4■□□□□ 0.54
PHRF1-201ENST00000264555 MASTLQ96GX5 879 aa18.4■□□□□ 0.54
PHRF1-201ENST00000264555 H0YCG3 227 aa18.4■□□□□ 0.54
PHRF1-201ENST00000264555 IRX3P78415 501 aaPredicted RBP18.4■□□□□ 0.54
PHRF1-201ENST00000264555 PPFIA1Q13136 1202 aa18.4■□□□□ 0.54
PHRF1-201ENST00000264555 SYDE2Q5VT97 1194 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms