RNA–Protein interactions for RNA: ENST00000264389.6

COPS4-201, Transcript of COP9 signalosome subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS4, Length 1,744 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-201ENST00000264389 POLR2DO15514 142 aaKnown RBP9.42□□□□□ -0.9
COPS4-201ENST00000264389 USP2O75604 605 aaPredicted RBP9.42□□□□□ -0.9
COPS4-201ENST00000264389 FLOT1O75955 427 aa9.42□□□□□ -0.9
COPS4-201ENST00000264389 TDP2O95551 362 aa9.42□□□□□ -0.9
COPS4-201ENST00000264389 XRCC6P12956 609 aaKnown RBP eCLIP9.42□□□□□ -0.9
COPS4-201ENST00000264389 LONP1P36776 959 aaKnown RBP9.42□□□□□ -0.9
COPS4-201ENST00000264389 VGLL4Q14135 290 aa9.42□□□□□ -0.9
COPS4-201ENST00000264389 ZRSR1Q15695 479 aaKnown RBP9.42□□□□□ -0.9
COPS4-201ENST00000264389 STX1AQ16623 288 aa9.42□□□□□ -0.9
COPS4-201ENST00000264389 DTHD1Q6ZMT9 781 aa9.42□□□□□ -0.9
COPS4-201ENST00000264389 KRBA2Q6ZNG9 492 aa9.42□□□□□ -0.9
COPS4-201ENST00000264389 C4orf32Q8N8J7 132 aa9.42□□□□□ -0.9
COPS4-201ENST00000264389 PRPF38AQ8NAV1 312 aaKnown RBP9.42□□□□□ -0.9
COPS4-201ENST00000264389 CNNM3Q8NE01 707 aa9.42□□□□□ -0.9
COPS4-201ENST00000264389 CCDC34Q96HJ3 373 aa9.42□□□□□ -0.9
COPS4-201ENST00000264389 C12orf42Q96LP6 360 aa9.42□□□□□ -0.9
COPS4-201ENST00000264389 TMEM60Q9H2L4 133 aa9.42□□□□□ -0.9
COPS4-201ENST00000264389 TAF1DQ9H5J8 278 aaPredicted RBP9.42□□□□□ -0.9
COPS4-201ENST00000264389 EMILIN3Q9NT22 766 aa9.42□□□□□ -0.9
COPS4-201ENST00000264389 HOOK1Q9UJC3 728 aaKnown RBP9.42□□□□□ -0.9
COPS4-201ENST00000264389 CCPG1Q9ULG6 757 aa9.42□□□□□ -0.9
COPS4-201ENST00000264389 CTDP1Q9Y5B0 961 aaPredicted RBP9.42□□□□□ -0.9
COPS4-201ENST00000264389 SNCAIPQ9Y6H5 919 aa9.42□□□□□ -0.9
COPS4-201ENST00000264389 TRPM7Q96QT4 1865 aa9.41□□□□□ -0.9
COPS4-201ENST00000264389 LOXHD1Q8IVV2 1947 aa9.41□□□□□ -0.9
COPS4-201ENST00000264389 MEIS2O14770 477 aa9.41□□□□□ -0.9
COPS4-201ENST00000264389 FOSP01100 380 aaPredicted RBP9.41□□□□□ -0.9
COPS4-201ENST00000264389 ICAM1P05362 532 aa9.41□□□□□ -0.9
COPS4-201ENST00000264389 GCFC2P16383 781 aaKnown RBP9.41□□□□□ -0.9
COPS4-201ENST00000264389 HMGCS2P54868 508 aa9.41□□□□□ -0.9
COPS4-201ENST00000264389 MAP3K9P80192 1104 aa9.41□□□□□ -0.9
COPS4-201ENST00000264389 TTLL12Q14166 644 aaPredicted RBP9.41□□□□□ -0.9
COPS4-201ENST00000264389 CALCRLQ16602 461 aa9.41□□□□□ -0.9
COPS4-201ENST00000264389 DLK2Q6UY11 383 aa9.41□□□□□ -0.9
COPS4-201ENST00000264389 USP49Q70CQ1 688 aa9.41□□□□□ -0.9
COPS4-201ENST00000264389 PNMA8AQ86V59 439 aaPredicted RBP9.41□□□□□ -0.9
COPS4-201ENST00000264389 TEX2Q8IWB9 1127 aa9.41□□□□□ -0.9
COPS4-201ENST00000264389 PDILTQ8N807 584 aa9.41□□□□□ -0.9
COPS4-201ENST00000264389 ANP32BQ92688 251 aaKnown RBP9.41□□□□□ -0.9
COPS4-201ENST00000264389 EPSTI1Q96J88 318 aa9.41□□□□□ -0.9
COPS4-201ENST00000264389 PYM1Q9BRP8 204 aaKnown RBP9.41□□□□□ -0.9
COPS4-201ENST00000264389 TMOD4Q9NZQ9 345 aa9.41□□□□□ -0.9
COPS4-201ENST00000264389 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.41□□□□□ -0.9
COPS4-201ENST00000264389 PPP1R9AQ9ULJ8 1098 aa9.41□□□□□ -0.9
COPS4-201ENST00000264389 MRPL11Q9Y3B7 192 aaKnown RBP9.41□□□□□ -0.9
COPS4-201ENST00000264389 LCTP09848 1927 aa9.4□□□□□ -0.9
COPS4-201ENST00000264389 UTRNP46939 3433 aa9.4□□□□□ -0.9
COPS4-201ENST00000264389 PIK3CDO00329 1044 aa9.4□□□□□ -0.9
COPS4-201ENST00000264389 OPLAHO14841 1288 aa9.4□□□□□ -0.9
COPS4-201ENST00000264389 SLC37A4O43826 429 aa9.4□□□□□ -0.9
COPS4-201ENST00000264389 CFBP00751 764 aa9.4□□□□□ -0.9
COPS4-201ENST00000264389 MNX1P50219 401 aaPredicted RBP9.4□□□□□ -0.9
COPS4-201ENST00000264389 IL17AQ16552 155 aa9.4□□□□□ -0.9
COPS4-201ENST00000264389 TMEM266Q2M3C6 531 aa9.4□□□□□ -0.9
COPS4-201ENST00000264389 LONRF3Q496Y0 759 aa9.4□□□□□ -0.9
COPS4-201ENST00000264389 ANO6Q4KMQ2 910 aa9.4□□□□□ -0.9
COPS4-201ENST00000264389 PPP4R3AQ6IN85 833 aa9.4□□□□□ -0.9
COPS4-201ENST00000264389 CHADLQ6NUI6 762 aa9.4□□□□□ -0.9
COPS4-201ENST00000264389 KANK3Q6NY19 840 aa9.4□□□□□ -0.9
COPS4-201ENST00000264389 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.4□□□□□ -0.9
COPS4-201ENST00000264389 LDHDQ86WU2 507 aa9.4□□□□□ -0.9
COPS4-201ENST00000264389 CEP57L1Q8IYX8 460 aa9.4□□□□□ -0.9
COPS4-201ENST00000264389 RASSF8Q8NHQ8 419 aa9.4□□□□□ -0.9
COPS4-201ENST00000264389 ERCC4Q92889 916 aaPredicted RBP9.4□□□□□ -0.9
COPS4-201ENST00000264389 DHX58Q96C10 678 aa9.4□□□□□ -0.9
COPS4-201ENST00000264389 PANK2Q9BZ23 570 aa9.4□□□□□ -0.9
COPS4-201ENST00000264389 EHMT1Q9H9B1 1298 aa9.4□□□□□ -0.9
COPS4-201ENST00000264389 DDX25Q9UHL0 483 aaKnown RBP9.4□□□□□ -0.9
COPS4-201ENST00000264389 SERTAD1Q9UHV2 236 aa9.4□□□□□ -0.9
COPS4-201ENST00000264389 ZNF536O15090 1300 aa9.4□□□□□ -0.91
COPS4-201ENST00000264389 KIAA1217Q5T5P2 1943 aa9.39□□□□□ -0.91
COPS4-201ENST00000264389 GCOM1H8Y6P7 765 aaPredicted RBP9.39□□□□□ -0.91
COPS4-201ENST00000264389 ACTN4O43707 911 aaKnown RBP9.39□□□□□ -0.91
COPS4-201ENST00000264389 ECM2O94769 699 aaPredicted RBP9.39□□□□□ -0.91
COPS4-201ENST00000264389 POLR2MP0CAP2 368 aa9.39□□□□□ -0.91
COPS4-201ENST00000264389 FDX1P10109 184 aa9.39□□□□□ -0.91
COPS4-201ENST00000264389 HOXA13P31271 388 aaPredicted RBP9.39□□□□□ -0.91
COPS4-201ENST00000264389 ANKRD13AQ8IZ07 590 aa9.39□□□□□ -0.91
COPS4-201ENST00000264389 RBM46Q8TBY0 533 aaKnown RBP9.39□□□□□ -0.91
COPS4-201ENST00000264389 FAM200AQ8TCP9 573 aa9.39□□□□□ -0.91
COPS4-201ENST00000264389 AK8Q96MA6 479 aa9.39□□□□□ -0.91
COPS4-201ENST00000264389 RAB34Q9BZG1 259 aa9.39□□□□□ -0.91
COPS4-201ENST00000264389 ELP3Q9H9T3 547 aa9.39□□□□□ -0.91
COPS4-201ENST00000264389 SLC38A10Q9HBR0 1119 aa9.39□□□□□ -0.91
COPS4-201ENST00000264389 ANO10Q9NW15 660 aa9.39□□□□□ -0.91
COPS4-201ENST00000264389 KIAA1468Q9P260 1216 aa9.39□□□□□ -0.91
COPS4-201ENST00000264389 USP25Q9UHP3 1055 aa9.39□□□□□ -0.91
COPS4-201ENST00000264389 PNMA2Q9UL42 364 aa9.39□□□□□ -0.91
COPS4-201ENST00000264389 AFG3L2Q9Y4W6 797 aa9.39□□□□□ -0.91
COPS4-201ENST00000264389 A0A087X0B3 334 aa9.39□□□□□ -0.91
COPS4-201ENST00000264389 MARCH6O60337 910 aa9.39□□□□□ -0.91
COPS4-201ENST00000264389 ZBED4O75132 1171 aa9.39□□□□□ -0.91
COPS4-201ENST00000264389 CAVIN2O95810 425 aa9.39□□□□□ -0.91
COPS4-201ENST00000264389 SREBF1P36956 1147 aa9.39□□□□□ -0.91
COPS4-201ENST00000264389 USP11P51784 963 aa9.39□□□□□ -0.91
COPS4-201ENST00000264389 ARHGAP4P98171 946 aa9.39□□□□□ -0.91
COPS4-201ENST00000264389 PNOCQ13519 176 aa9.39□□□□□ -0.91
COPS4-201ENST00000264389 POSTNQ15063 836 aa9.39□□□□□ -0.91
COPS4-201ENST00000264389 MOXD1Q6UVY6 613 aa9.39□□□□□ -0.91
COPS4-201ENST00000264389 FCHSD1Q86WN1 690 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms