RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 TDHQ8IZJ6 230 aa18.75■□□□□ 0.59
USE1-201ENST00000263897 DNERQ8NFT8 737 aa18.75■□□□□ 0.59
USE1-201ENST00000263897 TBC1D5Q92609 795 aa18.75■□□□□ 0.59
USE1-201ENST00000263897 GLT1D1Q96MS3 346 aa18.75■□□□□ 0.59
USE1-201ENST00000263897 LSG1Q9H089 658 aaKnown RBP18.75■□□□□ 0.59
USE1-201ENST00000263897 PDLIM7Q9NR12 457 aa18.75■□□□□ 0.59
USE1-201ENST00000263897 MAD2L2Q9UI95 211 aa18.75■□□□□ 0.59
USE1-201ENST00000263897 Q9Y3F1 56 aa18.75■□□□□ 0.59
USE1-201ENST00000263897 MYH6P13533 1939 aa18.74■□□□□ 0.59
USE1-201ENST00000263897 TRIM43BA6NCK2 446 aa18.74■□□□□ 0.59
USE1-201ENST00000263897 PALM3A6NDB9 673 aaPredicted RBP18.74■□□□□ 0.59
USE1-201ENST00000263897 DYNC1LI2O43237 492 aaPredicted RBP18.74■□□□□ 0.59
USE1-201ENST00000263897 SART3Q15020 963 aaKnown RBP18.74■□□□□ 0.59
USE1-201ENST00000263897 CHST3Q7LGC8 479 aa18.74■□□□□ 0.59
USE1-201ENST00000263897 ANKRD33Q7Z3H0 272 aa18.74■□□□□ 0.59
USE1-201ENST00000263897 IGDCC4Q8TDY8 1250 aa18.74■□□□□ 0.59
USE1-201ENST00000263897 VTI1AQ96AJ9 217 aa18.74■□□□□ 0.59
USE1-201ENST00000263897 TRIM43Q96BQ3 446 aaPredicted RBP18.74■□□□□ 0.59
USE1-201ENST00000263897 TOX2Q96NM4 488 aa18.74■□□□□ 0.59
USE1-201ENST00000263897 AP5M1Q9H0R1 490 aa18.74■□□□□ 0.59
USE1-201ENST00000263897 SENP2Q9HC62 589 aa18.74■□□□□ 0.59
USE1-201ENST00000263897 PRDM5Q9NQX1 630 aaPredicted RBP18.74■□□□□ 0.59
USE1-201ENST00000263897 RBM47A0AV96 593 aaKnown RBP18.73■□□□□ 0.59
USE1-201ENST00000263897 B4DLN1 442 aa18.73■□□□□ 0.59
USE1-201ENST00000263897 SOX1O00570 391 aaPredicted RBP18.73■□□□□ 0.59
USE1-201ENST00000263897 CDK7P50613 346 aa18.73■□□□□ 0.59
USE1-201ENST00000263897 MRPL12P52815 198 aaKnown RBP18.73■□□□□ 0.59
USE1-201ENST00000263897 ANTXR2P58335 489 aa18.73■□□□□ 0.59
USE1-201ENST00000263897 BEX3Q00994 111 aa18.73■□□□□ 0.59
USE1-201ENST00000263897 WTAPQ15007 396 aa18.73■□□□□ 0.59
USE1-201ENST00000263897 LRIT3Q3SXY7 679 aa18.73■□□□□ 0.59
USE1-201ENST00000263897 TMEM63BQ5T3F8 832 aa18.73■□□□□ 0.59
USE1-201ENST00000263897 TLK2Q86UE8 772 aa18.73■□□□□ 0.59
USE1-201ENST00000263897 MB21D2Q8IYB1 491 aaPredicted RBP18.73■□□□□ 0.59
USE1-201ENST00000263897 MTMR8Q96EF0 704 aa18.73■□□□□ 0.59
USE1-201ENST00000263897 MPHOSPH6Q99547 160 aaKnown RBP18.73■□□□□ 0.59
USE1-201ENST00000263897 MRPL11Q9Y3B7 192 aaKnown RBP18.73■□□□□ 0.59
USE1-201ENST00000263897 BAZ2BQ9UIF8 2168 aaKnown RBP18.73■□□□□ 0.59
USE1-201ENST00000263897 DCDC2CA8MYV0 355 aa18.72■□□□□ 0.59
USE1-201ENST00000263897 PQBP1O60828 265 aaKnown RBP18.72■□□□□ 0.59
USE1-201ENST00000263897 CLTBP09497 229 aa18.72■□□□□ 0.59
USE1-201ENST00000263897 EDNRBP24530 442 aa18.72■□□□□ 0.59
USE1-201ENST00000263897 PDE4DQ08499 809 aa18.72■□□□□ 0.59
USE1-201ENST00000263897 TROAPQ12815 778 aa18.72■□□□□ 0.59
USE1-201ENST00000263897 GRM4Q14833 912 aa18.72■□□□□ 0.59
USE1-201ENST00000263897 DUSP28Q4G0W2 176 aa18.72■□□□□ 0.59
USE1-201ENST00000263897 TMEM67Q5HYA8 995 aa18.72■□□□□ 0.59
USE1-201ENST00000263897 MCF2L2Q86YR7 1114 aa18.72■□□□□ 0.59
USE1-201ENST00000263897 AMNQ9BXJ7 453 aa18.72■□□□□ 0.59
USE1-201ENST00000263897 ZBTB5O15062 677 aa18.71■□□□□ 0.59
USE1-201ENST00000263897 KIAA0355O15063 1070 aa18.71■□□□□ 0.59
USE1-201ENST00000263897 PTGS1P23219 599 aa18.71■□□□□ 0.59
USE1-201ENST00000263897 FAAP100Q0VG06 881 aa18.71■□□□□ 0.59
USE1-201ENST00000263897 NECTIN1Q15223 517 aa18.71■□□□□ 0.59
USE1-201ENST00000263897 FSCN1Q16658 493 aaKnown RBP18.71■□□□□ 0.59
USE1-201ENST00000263897 SYTL5Q8TDW5 730 aaPredicted RBP18.71■□□□□ 0.59
USE1-201ENST00000263897 BADQ92934 168 aa18.71■□□□□ 0.59
USE1-201ENST00000263897 LRCH3Q96II8 777 aa18.71■□□□□ 0.59
USE1-201ENST00000263897 MTA3Q9BTC8 594 aa18.71■□□□□ 0.59
USE1-201ENST00000263897 WDR11Q9BZH6 1224 aa18.71■□□□□ 0.59
USE1-201ENST00000263897 RIOX1Q9H6W3 641 aa18.71■□□□□ 0.59
USE1-201ENST00000263897 LRRC37A2A6NM11 1700 aa18.71■□□□□ 0.59
USE1-201ENST00000263897 A0A0U1RQG5 324 aaPredicted RBP18.7■□□□□ 0.58
USE1-201ENST00000263897 ARVCFO00192 962 aa18.7■□□□□ 0.58
USE1-201ENST00000263897 SLC27A2O14975 620 aa18.7■□□□□ 0.58
USE1-201ENST00000263897 ZEB2O60315 1214 aa18.7■□□□□ 0.58
USE1-201ENST00000263897 SLC35G1Q2M3R5 365 aa18.7■□□□□ 0.58
USE1-201ENST00000263897 CXCL17Q6UXB2 119 aa18.7■□□□□ 0.58
USE1-201ENST00000263897 CATIPQ7Z7H3 387 aa18.7■□□□□ 0.58
USE1-201ENST00000263897 TAAR1Q96RJ0 339 aa18.7■□□□□ 0.58
USE1-201ENST00000263897 ANO2Q9NQ90 1003 aa18.7■□□□□ 0.58
USE1-201ENST00000263897 TMEM39AQ9NV64 488 aa18.7■□□□□ 0.58
USE1-201ENST00000263897 PPP1R11O60927 126 aaPredicted RBP18.69■□□□□ 0.58
USE1-201ENST00000263897 CABYRO75952 493 aa18.69■□□□□ 0.58
USE1-201ENST00000263897 ITGB8P26012 769 aa18.69■□□□□ 0.58
USE1-201ENST00000263897 CREB3L3Q68CJ9 461 aa18.69■□□□□ 0.58
USE1-201ENST00000263897 NSUN6Q8TEA1 469 aaKnown RBP18.69■□□□□ 0.58
USE1-201ENST00000263897 CCDC136Q96JN2 1154 aa18.69■□□□□ 0.58
USE1-201ENST00000263897 COL20A1Q9P218 1284 aa18.69■□□□□ 0.58
USE1-201ENST00000263897 PCDHA1Q9Y5I3 950 aa18.69■□□□□ 0.58
USE1-201ENST00000263897 LTBP2Q14767 1821 aa18.69■□□□□ 0.58
USE1-201ENST00000263897 MROH7Q68CQ1 1323 aa18.69■□□□□ 0.58
USE1-201ENST00000263897 OPLAHO14841 1288 aa18.68■□□□□ 0.58
USE1-201ENST00000263897 PRC1O43663 620 aa18.68■□□□□ 0.58
USE1-201ENST00000263897 RAG1P15918 1043 aa18.68■□□□□ 0.58
USE1-201ENST00000263897 MCM5P33992 734 aa18.68■□□□□ 0.58
USE1-201ENST00000263897 TRAF1Q13077 416 aa18.68■□□□□ 0.58
USE1-201ENST00000263897 CASC1Q6TDU7 716 aa18.68■□□□□ 0.58
USE1-201ENST00000263897 TMTC2Q8N394 836 aa18.68■□□□□ 0.58
USE1-201ENST00000263897 SLC43A3Q8NBI5 491 aa18.68■□□□□ 0.58
USE1-201ENST00000263897 SCFD2Q8WU76 684 aa18.68■□□□□ 0.58
USE1-201ENST00000263897 PIGSQ96S52 555 aa18.68■□□□□ 0.58
USE1-201ENST00000263897 IWS1Q96ST2 819 aa18.68■□□□□ 0.58
USE1-201ENST00000263897 RMDN3Q96TC7 470 aa18.68■□□□□ 0.58
USE1-201ENST00000263897 MAP3K14Q99558 947 aa18.68■□□□□ 0.58
USE1-201ENST00000263897 LY9Q9HBG7 655 aa18.68■□□□□ 0.58
USE1-201ENST00000263897 GPHNQ9NQX3 736 aaPredicted RBP18.68■□□□□ 0.58
USE1-201ENST00000263897 NKRFO15226 690 aaKnown RBP eCLIP18.67■□□□□ 0.58
USE1-201ENST00000263897 CYTH3O43739 400 aa18.67■□□□□ 0.58
USE1-201ENST00000263897 CFBP00751 764 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms