RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 ASTN1O14525 1302 aa21.16■□□□□ 0.98
SDF4-201ENST00000263741 PFASO15067 1338 aa21.15■□□□□ 0.98
SDF4-201ENST00000263741 PRPF3O43395 683 aaKnown RBP21.15■□□□□ 0.98
SDF4-201ENST00000263741 SCG2P13521 617 aa21.15■□□□□ 0.98
SDF4-201ENST00000263741 SSRP1Q08945 709 aaKnown RBP21.15■□□□□ 0.98
SDF4-201ENST00000263741 PFKFB3Q16875 520 aaPredicted RBP21.15■□□□□ 0.98
SDF4-201ENST00000263741 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.15■□□□□ 0.981e-11■■■□□ 18.6
SDF4-201ENST00000263741 SHISA4Q96DD7 197 aa21.15■□□□□ 0.98
SDF4-201ENST00000263741 COL20A1Q9P218 1284 aa21.15■□□□□ 0.98
SDF4-201ENST00000263741 POTEB2H3BUK9 544 aa21.14■□□□□ 0.98
SDF4-201ENST00000263741 STXBP3O00186 592 aa21.14■□□□□ 0.98
SDF4-201ENST00000263741 PRMT2P55345 433 aa21.14■□□□□ 0.98
SDF4-201ENST00000263741 AKAP17AQ02040 695 aaKnown RBP21.14■□□□□ 0.98
SDF4-201ENST00000263741 IRF5Q13568 498 aa21.14■□□□□ 0.98
SDF4-201ENST00000263741 ZNF792Q3KQV3 632 aa21.14■□□□□ 0.98
SDF4-201ENST00000263741 CPLX2Q6PUV4 134 aaKnown RBP21.14■□□□□ 0.98
SDF4-201ENST00000263741 NSUN7Q8NE18 718 aaKnown RBP21.14■□□□□ 0.98
SDF4-201ENST00000263741 TMX3Q96JJ7 454 aa21.14■□□□□ 0.98
SDF4-201ENST00000263741 NAPAP54920 295 aa21.14■□□□□ 0.97
SDF4-201ENST00000263741 SLC9C1Q4G0N8 1177 aa21.14■□□□□ 0.97
SDF4-201ENST00000263741 TRIM22Q8IYM9 498 aa21.14■□□□□ 0.97
SDF4-201ENST00000263741 MAML3Q96JK9 1138 aa21.14■□□□□ 0.97
SDF4-201ENST00000263741 SOWAHBA6NEL2 793 aa21.13■□□□□ 0.97
SDF4-201ENST00000263741 GRK4P32298 578 aa21.13■□□□□ 0.97
SDF4-201ENST00000263741 FAM133AQ8N9E0 248 aa21.13■□□□□ 0.97
SDF4-201ENST00000263741 VPS54Q9P1Q0 977 aa21.13■□□□□ 0.97
SDF4-201ENST00000263741 HOXC6P09630 235 aa21.13■□□□□ 0.97
SDF4-201ENST00000263741 CYP2C19P33261 490 aa21.13■□□□□ 0.97
SDF4-201ENST00000263741 PKN2Q16513 984 aaKnown RBP21.13■□□□□ 0.97
SDF4-201ENST00000263741 ZSCAN31Q96LW9 406 aaPredicted RBP21.13■□□□□ 0.97
SDF4-201ENST00000263741 BARHL2Q9NY43 387 aa21.13■□□□□ 0.97
SDF4-201ENST00000263741 ADAMTS3O15072 1205 aa21.12■□□□□ 0.97
SDF4-201ENST00000263741 CDKL5O76039 1030 aa21.12■□□□□ 0.97
SDF4-201ENST00000263741 FOSBP53539 338 aa21.12■□□□□ 0.97
SDF4-201ENST00000263741 UBE2SQ16763 222 aa21.12■□□□□ 0.97
SDF4-201ENST00000263741 USP17L6PQ6QN14 398 aa21.12■□□□□ 0.97
SDF4-201ENST00000263741 SYTL5Q8TDW5 730 aaPredicted RBP21.12■□□□□ 0.97
SDF4-201ENST00000263741 SH2B1Q9NRF2 756 aaPredicted RBP21.12■□□□□ 0.97
SDF4-201ENST00000263741 GJB4Q9NTQ9 266 aa21.12■□□□□ 0.97
SDF4-201ENST00000263741 BIN2Q9UBW5 565 aaPredicted RBP21.12■□□□□ 0.97
SDF4-201ENST00000263741 FRMPD3Q5JV73 1810 aa21.12■□□□□ 0.97
SDF4-201ENST00000263741 XRCC5P13010 732 aaKnown RBP21.11■□□□□ 0.97
SDF4-201ENST00000263741 SLAIN1Q8ND83 568 aa21.11■□□□□ 0.97
SDF4-201ENST00000263741 ORC3Q9UBD5 711 aaPredicted RBP21.11■□□□□ 0.97
SDF4-201ENST00000263741 DEXIO95424 95 aa21.11■□□□□ 0.97
SDF4-201ENST00000263741 INHAP05111 366 aa21.11■□□□□ 0.97
SDF4-201ENST00000263741 FDPSP14324 419 aaKnown RBP21.11■□□□□ 0.97
SDF4-201ENST00000263741 HSD17B4P51659 736 aa21.11■□□□□ 0.97
SDF4-201ENST00000263741 FCHSD1Q86WN1 690 aa21.11■□□□□ 0.97
SDF4-201ENST00000263741 MCF2L2Q86YR7 1114 aa21.11■□□□□ 0.97
SDF4-201ENST00000263741 STK36Q9NRP7 1315 aa21.1■□□□□ 0.97
SDF4-201ENST00000263741 KIAA1217Q5T5P2 1943 aa21.1■□□□□ 0.97
SDF4-201ENST00000263741 TRAF1Q13077 416 aa21.1■□□□□ 0.97
SDF4-201ENST00000263741 TAAR1Q96RJ0 339 aa21.1■□□□□ 0.97
SDF4-201ENST00000263741 SLC5A4Q9NY91 659 aa21.1■□□□□ 0.97
SDF4-201ENST00000263741 RBM27Q9P2N5 1060 aaKnown RBP21.1■□□□□ 0.97
SDF4-201ENST00000263741 KIAA0100Q14667 2235 aaKnown RBP21.1■□□□□ 0.97
SDF4-201ENST00000263741 MYH7BA7E2Y1 1941 aa21.1■□□□□ 0.97
SDF4-201ENST00000263741 HMGCRP04035 888 aa21.09■□□□□ 0.97
SDF4-201ENST00000263741 PXYLP1Q8TE99 480 aa21.09■□□□□ 0.97
SDF4-201ENST00000263741 PSTPIP2Q9H939 334 aa21.09■□□□□ 0.97
SDF4-201ENST00000263741 GCOM1H8Y6P7 765 aaPredicted RBP21.09■□□□□ 0.97
SDF4-201ENST00000263741 POLR2MP0CAP2 368 aa21.09■□□□□ 0.97
SDF4-201ENST00000263741 PRAMEF19Q5SWL8 479 aa21.09■□□□□ 0.97
SDF4-201ENST00000263741 MEIS2O14770 477 aa21.08■□□□□ 0.97
SDF4-201ENST00000263741 MCM2P49736 904 aa21.08■□□□□ 0.97
SDF4-201ENST00000263741 ALDH5A1P51649 535 aaPredicted RBP21.08■□□□□ 0.97
SDF4-201ENST00000263741 UBXN2AP68543 259 aa21.08■□□□□ 0.97
SDF4-201ENST00000263741 RGS22Q8NE09 1264 aa21.08■□□□□ 0.97
SDF4-201ENST00000263741 PGBD1Q96JS3 809 aa21.08■□□□□ 0.97
SDF4-201ENST00000263741 SMCO2A6NFE2 343 aa21.08■□□□□ 0.96
SDF4-201ENST00000263741 PRKAR2AP13861 404 aaKnown RBP21.08■□□□□ 0.96
SDF4-201ENST00000263741 EIF2AK2P19525 551 aaKnown RBP21.08■□□□□ 0.96
SDF4-201ENST00000263741 ADCY7P51828 1080 aa21.08■□□□□ 0.96
SDF4-201ENST00000263741 MTFR1Q15390 333 aa21.08■□□□□ 0.96
SDF4-201ENST00000263741 PPP1R18Q6NYC8 613 aa21.08■□□□□ 0.96
SDF4-201ENST00000263741 TINF2Q9BSI4 451 aa21.08■□□□□ 0.96
SDF4-201ENST00000263741 DIS3Q9Y2L1 958 aaKnown RBP21.08■□□□□ 0.96
SDF4-201ENST00000263741 hCG_1984214I3L0E3 225 aa21.07■□□□□ 0.96
SDF4-201ENST00000263741 GHRHRQ02643 423 aa21.07■□□□□ 0.96
SDF4-201ENST00000263741 OLFML2BQ68BL8 750 aa21.07■□□□□ 0.96
SDF4-201ENST00000263741 ARMCX2Q7L311 632 aa21.07■□□□□ 0.96
SDF4-201ENST00000263741 TNS4Q8IZW8 715 aa21.07■□□□□ 0.96
SDF4-201ENST00000263741 ZNF713Q8N859 430 aaPredicted RBP21.07■□□□□ 0.96
SDF4-201ENST00000263741 SMARCC2Q8TAQ2 1214 aa21.07■□□□□ 0.96
SDF4-201ENST00000263741 RMDN3Q96TC7 470 aa21.07■□□□□ 0.96
SDF4-201ENST00000263741 TMEM260Q9NX78 707 aa21.07■□□□□ 0.96
SDF4-201ENST00000263741 KCNJ14Q9UNX9 436 aa21.07■□□□□ 0.96
SDF4-201ENST00000263741 IGHA2P01877 340 aa21.06■□□□□ 0.96
SDF4-201ENST00000263741 CACNB2Q08289 660 aaPredicted RBP21.06■□□□□ 0.96
SDF4-201ENST00000263741 EEPD1Q7L9B9 569 aa21.06■□□□□ 0.96
SDF4-201ENST00000263741 RASGRP4Q8TDF6 673 aa21.06■□□□□ 0.96
SDF4-201ENST00000263741 CUL5Q93034 780 aa21.06■□□□□ 0.96
SDF4-201ENST00000263741 ZFP91Q96JP5 570 aaPredicted RBP21.06■□□□□ 0.96
SDF4-201ENST00000263741 ALG1Q9BT22 464 aa21.06■□□□□ 0.96
SDF4-201ENST00000263741 DOCK5Q9H7D0 1870 aa21.06■□□□□ 0.96
SDF4-201ENST00000263741 TRPV1Q8NER1 839 aa21.06■□□□□ 0.96
SDF4-201ENST00000263741 IL31RAQ8NI17 732 aa21.06■□□□□ 0.96
SDF4-201ENST00000263741 ZNF333Q96JL9 665 aa21.06■□□□□ 0.96
SDF4-201ENST00000263741 RIC8AQ9NPQ8 531 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms