RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 SERPINA10Q9UK55 444 aa9.08□□□□□ -0.96
SNCAIP-201ENST00000261367 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.08□□□□□ -0.96
SNCAIP-201ENST00000261367 NCKAP5LQ9HCH0 1330 aa9.08□□□□□ -0.96
SNCAIP-201ENST00000261367 NEK2P51955 445 aa9.08□□□□□ -0.96
SNCAIP-201ENST00000261367 RESTQ13127 1097 aa9.08□□□□□ -0.96
SNCAIP-201ENST00000261367 CCDC144BQ3MJ40 725 aa9.08□□□□□ -0.96
SNCAIP-201ENST00000261367 CRACR2BQ8N4Y2 399 aaPredicted RBP9.08□□□□□ -0.96
SNCAIP-201ENST00000261367 TRIML2Q8N7C3 387 aa9.08□□□□□ -0.96
SNCAIP-201ENST00000261367 DNAJC9Q8WXX5 260 aa9.08□□□□□ -0.96
SNCAIP-201ENST00000261367 ARL2BPQ9Y2Y0 163 aa9.08□□□□□ -0.96
SNCAIP-201ENST00000261367 LRRC7Q96NW7 1537 aa9.08□□□□□ -0.96
SNCAIP-201ENST00000261367 PODXLO00592 558 aa9.08□□□□□ -0.96
SNCAIP-201ENST00000261367 SCP2P22307 547 aa9.08□□□□□ -0.96
SNCAIP-201ENST00000261367 GPTP24298 496 aa9.08□□□□□ -0.96
SNCAIP-201ENST00000261367 HSPA1LP34931 641 aa9.08□□□□□ -0.96
SNCAIP-201ENST00000261367 CAV1Q03135 178 aa9.08□□□□□ -0.96
SNCAIP-201ENST00000261367 LIN9Q5TKA1 542 aa9.08□□□□□ -0.96
SNCAIP-201ENST00000261367 CRELD2Q6UXH1 353 aaPredicted RBP9.08□□□□□ -0.96
SNCAIP-201ENST00000261367 KSR2Q6VAB6 950 aa9.08□□□□□ -0.96
SNCAIP-201ENST00000261367 CATSPER2Q96P56 530 aa9.08□□□□□ -0.96
SNCAIP-201ENST00000261367 ZMYND12Q9H0C1 365 aa9.08□□□□□ -0.96
SNCAIP-201ENST00000261367 HAUS2Q9NVX0 235 aa9.08□□□□□ -0.96
SNCAIP-201ENST00000261367 SERTAD1Q9UHV2 236 aa9.08□□□□□ -0.96
SNCAIP-201ENST00000261367 MAP3K2Q9Y2U5 619 aa9.08□□□□□ -0.96
SNCAIP-201ENST00000261367 NALCNQ8IZF0 1738 aa9.08□□□□□ -0.96
SNCAIP-201ENST00000261367 CPS1P31327 1500 aa9.08□□□□□ -0.96
SNCAIP-201ENST00000261367 ARHGEF10O15013 1369 aa9.08□□□□□ -0.96
SNCAIP-201ENST00000261367 GRM8O00222 908 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 THAP12O43422 761 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 ATP5JP18859 108 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 USP5P45974 858 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 ROR2Q01974 943 aaKnown RBP9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 IFIT1BQ5T764 474 aaKnown RBP9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 CENPUQ71F23 418 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 OGFOD1Q8N543 542 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 GABPB2Q8TAK5 448 aaPredicted RBP9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 PPP1R14BQ96C90 147 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 TRAPPC9Q96Q05 1148 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 NUDCD1Q96RS6 583 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 IWS1Q96ST2 819 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 SEPT3Q9UH03 358 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 DIAPH2O60879 1101 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 C2orf54Q08AI8 447 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 TMEM154Q6P9G4 183 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 LINS1Q8NG48 757 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 OPTNQ96CV9 577 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 RILPQ96NA2 401 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 FMO2Q99518 471 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 LRRC2Q9BYS8 371 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 NDE1Q9NXR1 346 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 PEAK1Q9H792 1746 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 ARHGEF9O43307 516 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 GFAPP14136 432 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 BYSLQ13895 437 aaKnown RBP9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 TERB1Q8NA31 727 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 MGARPQ8TDB4 240 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 ST7Q9NRC1 585 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 ADGRG1Q9Y653 693 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 RGPD1P0DJD0 1748 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 PTCH1Q13635 1447 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 CCT8L1PA6NM43 557 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 NVLO15381 856 aaKnown RBP9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 RAD21O60216 631 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 ESRRAP11474 423 aaPredicted RBP9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 TPP2P29144 1249 aaPredicted RBP9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 LSP1P33241 339 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 PTGISQ16647 500 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 E4F1Q66K89 784 aaPredicted RBP9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 KLC3Q6P597 504 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 LINC00301Q8NCQ3 95 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 DDI1Q8WTU0 396 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 ITFG2Q969R8 447 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 ZBTB10Q96DT7 871 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 FAM129AQ9BZQ8 928 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 TAF1DQ9H5J8 278 aaPredicted RBP9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 XAB2Q9HCS7 855 aaKnown RBP9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 PALMDQ9NP74 551 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 RIC8AQ9NPQ8 531 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 TSC22D4Q9Y3Q8 395 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 PARP3Q9Y6F1 533 aa9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 CPSF1Q10570 1443 aaKnown RBP9.07□□□□□ -0.96
SNCAIP-201ENST00000261367 STRNO43815 780 aa9.06□□□□□ -0.96
SNCAIP-201ENST00000261367 KCNA4P22459 653 aa9.06□□□□□ -0.96
SNCAIP-201ENST00000261367 SERPINB4P48594 390 aa9.06□□□□□ -0.96
SNCAIP-201ENST00000261367 EVA1CP58658 441 aa9.06□□□□□ -0.96
SNCAIP-201ENST00000261367 IKQ13123 557 aaPredicted RBP9.06□□□□□ -0.96
SNCAIP-201ENST00000261367 IFIT5Q13325 482 aaKnown RBP9.06□□□□□ -0.96
SNCAIP-201ENST00000261367 NAA30Q147X3 362 aaPredicted RBP9.06□□□□□ -0.96
SNCAIP-201ENST00000261367 TTC38Q5R3I4 469 aa9.06□□□□□ -0.96
SNCAIP-201ENST00000261367 RRAGAQ7L523 313 aa9.06□□□□□ -0.96
SNCAIP-201ENST00000261367 CTAGE3PQ8IX95 158 aa9.06□□□□□ -0.96
SNCAIP-201ENST00000261367 DIS3L2Q8IYB7 885 aaKnown RBP9.06□□□□□ -0.96
SNCAIP-201ENST00000261367 SYCP3Q8IZU3 236 aa9.06□□□□□ -0.96
SNCAIP-201ENST00000261367 OTUD7AQ8TE49 926 aaPredicted RBP9.06□□□□□ -0.96
SNCAIP-201ENST00000261367 MORC4Q8TE76 937 aa9.06□□□□□ -0.96
SNCAIP-201ENST00000261367 ELAC2Q9BQ52 826 aaKnown RBP9.06□□□□□ -0.96
SNCAIP-201ENST00000261367 SLITRK6Q9H5Y7 841 aa9.06□□□□□ -0.96
SNCAIP-201ENST00000261367 AATFQ9NY61 560 aaKnown RBP eCLIP9.06□□□□□ -0.96
SNCAIP-201ENST00000261367 USP27XA6NNY8 438 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms