RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 N4BP1O75113 896 aaKnown RBP13.24□□□□□ -0.29
COL8A1-201ENST00000261037 PABPC4Q13310 644 aaKnown RBP eCLIP13.24□□□□□ -0.29
COL8A1-201ENST00000261037 VCXQ9H320 206 aa13.24□□□□□ -0.29
COL8A1-201ENST00000261037 CACYBPQ9HB71 228 aaKnown RBP13.24□□□□□ -0.29
COL8A1-201ENST00000261037 ASAP1Q9ULH1 1129 aa13.24□□□□□ -0.29
COL8A1-201ENST00000261037 TMOD1P28289 359 aa13.23□□□□□ -0.29
COL8A1-201ENST00000261037 ERFEQ4G0M1 354 aa13.23□□□□□ -0.29
COL8A1-201ENST00000261037 DBNDD1Q9H9R9 158 aa13.23□□□□□ -0.29
COL8A1-201ENST00000261037 SEC31BQ9NQW1 1179 aa13.23□□□□□ -0.29
COL8A1-201ENST00000261037 MEIS1O00470 390 aa13.23□□□□□ -0.29
COL8A1-201ENST00000261037 RNF40O75150 1001 aa13.23□□□□□ -0.29
COL8A1-201ENST00000261037 BFSP1Q12934 665 aa13.23□□□□□ -0.29
COL8A1-201ENST00000261037 SMAP1Q8IYB5 467 aaPredicted RBP13.23□□□□□ -0.29
COL8A1-201ENST00000261037 LSG1Q9H089 658 aaKnown RBP13.23□□□□□ -0.29
COL8A1-201ENST00000261037 PCIF1Q9H4Z3 704 aa13.23□□□□□ -0.29
COL8A1-201ENST00000261037 SMYD2Q9NRG4 433 aa13.23□□□□□ -0.29
COL8A1-201ENST00000261037 AKT3Q9Y243 479 aa13.23□□□□□ -0.29
COL8A1-201ENST00000261037 KDM6BO15054 1643 aa13.23□□□□□ -0.29
COL8A1-201ENST00000261037 H7C0C1 242 aa13.23□□□□□ -0.29
COL8A1-201ENST00000261037 ENC1O14682 589 aa13.23□□□□□ -0.29
COL8A1-201ENST00000261037 ARHGAP25P42331 645 aa13.23□□□□□ -0.29
COL8A1-201ENST00000261037 ATP5OP48047 213 aa13.23□□□□□ -0.29
COL8A1-201ENST00000261037 ADCY1Q08828 1119 aa13.23□□□□□ -0.29
COL8A1-201ENST00000261037 LRRC8AQ8IWT6 810 aa13.23□□□□□ -0.29
COL8A1-201ENST00000261037 RNF10Q8N5U6 811 aaKnown RBP13.23□□□□□ -0.29
COL8A1-201ENST00000261037 HESX1Q9UBX0 185 aa13.23□□□□□ -0.29
COL8A1-201ENST00000261037 COL4A3BPQ9Y5P4 624 aa13.23□□□□□ -0.29
COL8A1-201ENST00000261037 COPB1P53618 953 aaKnown RBP13.23□□□□□ -0.29
COL8A1-201ENST00000261037 MESDQ14696 234 aa13.23□□□□□ -0.29
COL8A1-201ENST00000261037 FAM26FQ5R3K3 315 aa13.23□□□□□ -0.29
COL8A1-201ENST00000261037 ODR4Q5SWX8 454 aa13.23□□□□□ -0.29
COL8A1-201ENST00000261037 LRCH2Q5VUJ6 765 aa13.23□□□□□ -0.29
COL8A1-201ENST00000261037 FAM160B1Q5W0V3 765 aa13.23□□□□□ -0.29
COL8A1-201ENST00000261037 DCAF15Q66K64 600 aa13.23□□□□□ -0.29
COL8A1-201ENST00000261037 PRPF31Q8WWY3 499 aaKnown RBP13.23□□□□□ -0.29
COL8A1-201ENST00000261037 ZNF577Q9BSK1 485 aa13.23□□□□□ -0.29
COL8A1-201ENST00000261037 MYOM2P54296 1465 aa13.23□□□□□ -0.29
COL8A1-201ENST00000261037 GSTA1P08263 222 aa13.22□□□□□ -0.29
COL8A1-201ENST00000261037 GSTA2P09210 222 aa13.22□□□□□ -0.29
COL8A1-201ENST00000261037 KIF22Q14807 665 aa13.22□□□□□ -0.29
COL8A1-201ENST00000261037 ZNF589Q86UQ0 364 aaPredicted RBP13.22□□□□□ -0.29
COL8A1-201ENST00000261037 GOLGA5Q8TBA6 731 aa13.22□□□□□ -0.29
COL8A1-201ENST00000261037 IQCDQ96DY2 449 aa13.22□□□□□ -0.29
COL8A1-201ENST00000261037 SHROOM2Q13796 1616 aa13.22□□□□□ -0.29
COL8A1-201ENST00000261037 SSH2Q76I76 1423 aa13.22□□□□□ -0.29
COL8A1-201ENST00000261037 PLEKHG1Q9ULL1 1385 aa13.22□□□□□ -0.29
COL8A1-201ENST00000261037 BAG2O95816 211 aa13.22□□□□□ -0.29
COL8A1-201ENST00000261037 CASP14P31944 242 aa13.22□□□□□ -0.29
COL8A1-201ENST00000261037 SNAP25P60880 206 aa13.22□□□□□ -0.29
COL8A1-201ENST00000261037 EHHADHQ08426 723 aa13.22□□□□□ -0.29
COL8A1-201ENST00000261037 SNX1Q13596 522 aa13.22□□□□□ -0.29
COL8A1-201ENST00000261037 UNC5CLQ8IV45 518 aa13.22□□□□□ -0.29
COL8A1-201ENST00000261037 LRRC43Q8N309 656 aa13.22□□□□□ -0.29
COL8A1-201ENST00000261037 CLIC2O15247 247 aa13.22□□□□□ -0.29
COL8A1-201ENST00000261037 PRKAB2O43741 272 aa13.22□□□□□ -0.29
COL8A1-201ENST00000261037 SESN3P58005 492 aa13.22□□□□□ -0.29
COL8A1-201ENST00000261037 TRIM68Q6AZZ1 485 aa13.22□□□□□ -0.29
COL8A1-201ENST00000261037 UBE2Q2Q8WVN8 375 aa13.22□□□□□ -0.29
COL8A1-201ENST00000261037 CSRNP1Q96S65 589 aa13.22□□□□□ -0.29
COL8A1-201ENST00000261037 ZNF148Q9UQR1 794 aa13.22□□□□□ -0.29
COL8A1-201ENST00000261037 SLC4A1P02730 911 aa13.22□□□□□ -0.29
COL8A1-201ENST00000261037 LONP1P36776 959 aaKnown RBP13.22□□□□□ -0.29
COL8A1-201ENST00000261037 MKRN3Q13064 507 aaKnown RBP13.22□□□□□ -0.29
COL8A1-201ENST00000261037 SPATA1Q5VX52 437 aa13.22□□□□□ -0.29
COL8A1-201ENST00000261037 SULF1Q8IWU6 871 aa13.22□□□□□ -0.29
COL8A1-201ENST00000261037 TRIM56Q9BRZ2 755 aaKnown RBP13.22□□□□□ -0.29
COL8A1-201ENST00000261037 ANTXR1Q9H6X2 564 aa13.22□□□□□ -0.29
COL8A1-201ENST00000261037 NRBP2Q9NSY0 501 aa13.22□□□□□ -0.29
COL8A1-201ENST00000261037 PCDHA4Q9UN74 947 aa13.22□□□□□ -0.29
COL8A1-201ENST00000261037 UBN2Q6ZU65 1347 aa13.22□□□□□ -0.29
COL8A1-201ENST00000261037 EXOC3L4Q17RC7 722 aa13.22□□□□□ -0.29
COL8A1-201ENST00000261037 BZW2Q9Y6E2 419 aaKnown RBP13.22□□□□□ -0.29
COL8A1-201ENST00000261037 SGK1O00141 431 aa13.21□□□□□ -0.29
COL8A1-201ENST00000261037 TLR3O15455 904 aaKnown RBP13.21□□□□□ -0.29
COL8A1-201ENST00000261037 NSFP46459 744 aaKnown RBP13.21□□□□□ -0.29
COL8A1-201ENST00000261037 PI4K2BQ8TCG2 481 aa13.21□□□□□ -0.29
COL8A1-201ENST00000261037 RGS12O14924 1447 aa13.21□□□□□ -0.29
COL8A1-201ENST00000261037 KIF1BO60333 1816 aa13.21□□□□□ -0.29
COL8A1-201ENST00000261037 GOLGA8KD6RF30 607 aa13.21□□□□□ -0.29
COL8A1-201ENST00000261037 POC1B-GALNT4F8VUJ3 575 aa13.21□□□□□ -0.29
COL8A1-201ENST00000261037 PLCB4Q15147 1175 aa13.21□□□□□ -0.29
COL8A1-201ENST00000261037 LLGL1Q15334 1064 aa13.21□□□□□ -0.29
COL8A1-201ENST00000261037 A6NJR5 290 aa13.21□□□□□ -0.29
COL8A1-201ENST00000261037 PPFIA4O75335 1185 aa13.21□□□□□ -0.29
COL8A1-201ENST00000261037 FMNL1O95466 1100 aaPredicted RBP13.21□□□□□ -0.29
COL8A1-201ENST00000261037 ECE1P42892 770 aa13.21□□□□□ -0.29
COL8A1-201ENST00000261037 YWHAGP61981 247 aaKnown RBP eCLIP13.21□□□□□ -0.29
COL8A1-201ENST00000261037 PDE1CQ14123 709 aaPredicted RBP13.21□□□□□ -0.29
COL8A1-201ENST00000261037 ZBTB33Q86T24 672 aa13.21□□□□□ -0.29
COL8A1-201ENST00000261037 GBP7Q8N8V2 638 aaPredicted RBP13.21□□□□□ -0.29
COL8A1-201ENST00000261037 PIGSQ96S52 555 aa13.21□□□□□ -0.29
COL8A1-201ENST00000261037 NRBP1Q9UHY1 535 aa13.21□□□□□ -0.29
COL8A1-201ENST00000261037 KCNG1Q9UIX4 513 aa13.21□□□□□ -0.29
COL8A1-201ENST00000261037 DBNLQ9UJU6 430 aaKnown RBP13.21□□□□□ -0.29
COL8A1-201ENST00000261037 LOC102724428A0A0B4J2F2 783 aa13.21□□□□□ -0.3
COL8A1-201ENST00000261037 A0A1B0GUA9 196 aa13.21□□□□□ -0.3
COL8A1-201ENST00000261037 CLGNO14967 610 aa13.21□□□□□ -0.3
COL8A1-201ENST00000261037 HNRNPDLO14979 420 aaKnown RBP13.21□□□□□ -0.3
COL8A1-201ENST00000261037 CASP2P42575 452 aa13.21□□□□□ -0.3
COL8A1-201ENST00000261037 SIK1P57059 783 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms