RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 CYP2C19P33261 490 aa10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 HDLBPQ00341 1268 aaKnown RBP10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 MYO1EQ12965 1108 aa10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 LCA5Q86VQ0 697 aa10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 REXO1Q8N1G1 1221 aaKnown RBP10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 PIK3R5Q8WYR1 880 aa10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 DYDC2Q96IM9 177 aa10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 CYTH2Q99418 400 aa10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 TUBGCP2Q9BSJ2 902 aa10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 GOLPH3LQ9H4A5 285 aa10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 MED23Q9ULK4 1368 aa10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 MROH5Q6ZUA9 1318 aa10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 CREB3O43889 395 aa10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 SKIP12755 728 aa10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 TCIRG1Q13488 830 aa10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 TOB2Q14106 344 aaPredicted RBP10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 USH1GQ495M9 461 aa10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 PI16Q6UXB8 463 aa10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 ZC3H18Q86VM9 953 aaKnown RBP10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 NCAPGQ9BPX3 1015 aa10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 YY1AP1Q9H869 796 aa10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 DNM3Q9UQ16 869 aa10.66□□□□□ -0.7
CTDSPL2-201ENST00000260327 CEP170Q5SW79 1584 aa10.65□□□□□ -0.7
CTDSPL2-201ENST00000260327 KIF1CO43896 1103 aaKnown RBP10.65□□□□□ -0.7
CTDSPL2-201ENST00000260327 MSH2P43246 934 aa10.65□□□□□ -0.7
CTDSPL2-201ENST00000260327 DCUN1D2Q6PH85 259 aa10.65□□□□□ -0.7
CTDSPL2-201ENST00000260327 TBX22Q9Y458 520 aa10.65□□□□□ -0.7
CTDSPL2-201ENST00000260327 ARHGEF5Q12774 1597 aa10.65□□□□□ -0.7
CTDSPL2-201ENST00000260327 CTSWP56202 376 aa10.65□□□□□ -0.7
CTDSPL2-201ENST00000260327 PLA2G4DQ86XP0 818 aa10.65□□□□□ -0.7
CTDSPL2-201ENST00000260327 HAUS1Q96CS2 278 aa10.65□□□□□ -0.7
CTDSPL2-201ENST00000260327 CNOT6LQ96LI5 555 aaKnown RBP10.65□□□□□ -0.7
CTDSPL2-201ENST00000260327 TMEM232C9JQI7 657 aa10.65□□□□□ -0.7
CTDSPL2-201ENST00000260327 EXOC3O60645 756 aa10.65□□□□□ -0.7
CTDSPL2-201ENST00000260327 CYP27A1Q02318 531 aa10.65□□□□□ -0.7
CTDSPL2-201ENST00000260327 STAT1P42224 750 aa10.65□□□□□ -0.7
CTDSPL2-201ENST00000260327 PHKA1P46020 1223 aa10.65□□□□□ -0.7
CTDSPL2-201ENST00000260327 SNX16P57768 344 aa10.65□□□□□ -0.7
CTDSPL2-201ENST00000260327 PHEXP78562 749 aa10.65□□□□□ -0.7
CTDSPL2-201ENST00000260327 TRAF1Q13077 416 aa10.65□□□□□ -0.7
CTDSPL2-201ENST00000260327 ZBTB17Q13105 803 aa10.65□□□□□ -0.7
CTDSPL2-201ENST00000260327 ALS2CLQ60I27 953 aa10.65□□□□□ -0.7
CTDSPL2-201ENST00000260327 MSANTD4Q8NCY6 345 aa10.65□□□□□ -0.7
CTDSPL2-201ENST00000260327 GYG1P46976 350 aa10.65□□□□□ -0.71
CTDSPL2-201ENST00000260327 PARP9Q8IXQ6 854 aa10.65□□□□□ -0.71
CTDSPL2-201ENST00000260327 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.65□□□□□ -0.71
CTDSPL2-201ENST00000260327 PLAAQ9Y263 795 aa10.65□□□□□ -0.71
CTDSPL2-201ENST00000260327 MYOCDQ8IZQ8 938 aa10.64□□□□□ -0.71
CTDSPL2-201ENST00000260327 RASGRP4Q8TDF6 673 aa10.64□□□□□ -0.71
CTDSPL2-201ENST00000260327 OSBP2Q969R2 916 aa10.64□□□□□ -0.71
CTDSPL2-201ENST00000260327 ENO4A6NNW6 628 aa10.64□□□□□ -0.71
CTDSPL2-201ENST00000260327 SCG2P13521 617 aa10.64□□□□□ -0.71
CTDSPL2-201ENST00000260327 ATF2P15336 505 aa10.64□□□□□ -0.71
CTDSPL2-201ENST00000260327 TMED2Q15363 201 aa10.64□□□□□ -0.71
CTDSPL2-201ENST00000260327 ARMC2Q8NEN0 867 aa10.64□□□□□ -0.71
CTDSPL2-201ENST00000260327 PPP4R1Q8TF05 950 aa10.64□□□□□ -0.71
CTDSPL2-201ENST00000260327 PUS7LQ9H0K6 701 aaKnown RBP10.64□□□□□ -0.71
CTDSPL2-201ENST00000260327 BCRP11274 1271 aa10.64□□□□□ -0.71
CTDSPL2-201ENST00000260327 TCP11X2Q5H9J9 407 aa10.64□□□□□ -0.71
CTDSPL2-201ENST00000260327 PDZD8Q8NEN9 1154 aa10.64□□□□□ -0.71
CTDSPL2-201ENST00000260327 AP1M1Q9BXS5 423 aa10.64□□□□□ -0.71
CTDSPL2-201ENST00000260327 KCNF1Q9H3M0 494 aa10.64□□□□□ -0.71
CTDSPL2-201ENST00000260327 BCAP29Q9UHQ4 241 aa10.64□□□□□ -0.71
CTDSPL2-201ENST00000260327 SATB1Q01826 763 aa10.64□□□□□ -0.71
CTDSPL2-201ENST00000260327 KIF22Q14807 665 aa10.64□□□□□ -0.71
CTDSPL2-201ENST00000260327 CLEC17AQ6ZS10 378 aa10.64□□□□□ -0.71
CTDSPL2-201ENST00000260327 GSDMAQ96QA5 445 aa10.64□□□□□ -0.71
CTDSPL2-201ENST00000260327 NAP1L4Q99733 375 aaKnown RBP10.64□□□□□ -0.71
CTDSPL2-201ENST00000260327 TADA3O75528 432 aa10.64□□□□□ -0.71
CTDSPL2-201ENST00000260327 MYCNP04198 464 aaPredicted RBP10.64□□□□□ -0.71
CTDSPL2-201ENST00000260327 POLA2Q14181 598 aa10.64□□□□□ -0.71
CTDSPL2-201ENST00000260327 BEND6Q5SZJ8 279 aaPredicted RBP10.64□□□□□ -0.71
CTDSPL2-201ENST00000260327 CAPRIN2Q6IMN6 1127 aaKnown RBP10.64□□□□□ -0.71
CTDSPL2-201ENST00000260327 FNBP4Q8N3X1 1017 aaPredicted RBP10.64□□□□□ -0.71
CTDSPL2-201ENST00000260327 IQCDQ96DY2 449 aa10.64□□□□□ -0.71
CTDSPL2-201ENST00000260327 TXLNGQ9NUQ3 528 aa10.64□□□□□ -0.71
CTDSPL2-201ENST00000260327 PCDHB6Q9Y5E3 794 aa10.64□□□□□ -0.71
CTDSPL2-201ENST00000260327 WDR91A4D1P6 747 aa10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 RNF8O76064 485 aa10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 UFL1O94874 794 aa10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 EEF1GP26641 437 aaKnown RBP10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 SNX1Q13596 522 aa10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 CCDC93Q567U6 631 aa10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 GPBP1Q86WP2 473 aa10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 MAGOHBQ96A72 148 aaKnown RBP10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 HVCN1Q96D96 273 aa10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 FRMPD2Q68DX3 1309 aaPredicted RBP10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 EVI5O60447 810 aa10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 NDUFA10O95299 355 aa10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 XRCC5P13010 732 aaKnown RBP10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 GREM2Q9H772 168 aa10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 KLC4Q9NSK0 619 aa10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 BTG4Q9NY30 223 aa10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 ARHGEF35A5YM69 484 aa10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 SART1O43290 800 aaKnown RBP10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 FMNL1O95466 1100 aaPredicted RBP10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 H2AFZP0C0S5 128 aa10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 PHKG2P15735 406 aa10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 ATF7P17544 494 aaPredicted RBP10.63□□□□□ -0.71
CTDSPL2-201ENST00000260327 KAZNQ674X7 775 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms