RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 RPS6P62753 249 aaKnown RBP19.37■□□□□ 0.69
SDCBP-201ENST00000260130 ALDH8A1Q9H2A2 487 aaPredicted RBP19.37■□□□□ 0.69
SDCBP-201ENST00000260130 CALML3P27482 149 aa19.37■□□□□ 0.69
SDCBP-201ENST00000260130 PRAMEF19Q5SWL8 479 aa19.37■□□□□ 0.69
SDCBP-201ENST00000260130 SLC30A10Q6XR72 485 aa19.37■□□□□ 0.69
SDCBP-201ENST00000260130 TBC1D5Q92609 795 aa19.37■□□□□ 0.69
SDCBP-201ENST00000260130 DEFB118Q96PH6 123 aa19.37■□□□□ 0.69
SDCBP-201ENST00000260130 SYNGAP1Q96PV0 1343 aa19.37■□□□□ 0.69
SDCBP-201ENST00000260130 CYBAP13498 195 aa19.36■□□□□ 0.69
SDCBP-201ENST00000260130 GJA8P48165 433 aa19.36■□□□□ 0.69
SDCBP-201ENST00000260130 FUT2Q10981 343 aa19.36■□□□□ 0.69
SDCBP-201ENST00000260130 TRPV1Q8NER1 839 aa19.36■□□□□ 0.69
SDCBP-201ENST00000260130 ZNF274Q96GC6 653 aaPredicted RBP19.36■□□□□ 0.69
SDCBP-201ENST00000260130 PURBQ96QR8 312 aaKnown RBP19.36■□□□□ 0.69
SDCBP-201ENST00000260130 LARP6Q9BRS8 491 aaKnown RBP19.36■□□□□ 0.69
SDCBP-201ENST00000260130 ADD3Q9UEY8 706 aaKnown RBP19.36■□□□□ 0.69
SDCBP-201ENST00000260130 NID2Q14112 1375 aa19.36■□□□□ 0.69
SDCBP-201ENST00000260130 SGPL1O95470 568 aa19.36■□□□□ 0.69
SDCBP-201ENST00000260130 EN2P19622 333 aaPredicted RBP19.36■□□□□ 0.69
SDCBP-201ENST00000260130 U2AF1L4Q8WU68 220 aaKnown RBP19.36■□□□□ 0.69
SDCBP-201ENST00000260130 NRBP1Q9UHY1 535 aa19.36■□□□□ 0.69
SDCBP-201ENST00000260130 OPLAHO14841 1288 aa19.35■□□□□ 0.69
SDCBP-201ENST00000260130 SNAI1O95863 264 aaPredicted RBP19.35■□□□□ 0.69
SDCBP-201ENST00000260130 CNGA1P29973 690 aa19.35■□□□□ 0.69
SDCBP-201ENST00000260130 CNPY2Q9Y2B0 182 aa19.35■□□□□ 0.69
SDCBP-201ENST00000260130 BAZ2BQ9UIF8 2168 aaKnown RBP19.35■□□□□ 0.69
SDCBP-201ENST00000260130 ASTN1O14525 1302 aa19.35■□□□□ 0.69
SDCBP-201ENST00000260130 CNTNAP5Q8WYK1 1306 aa19.35■□□□□ 0.69
SDCBP-201ENST00000260130 hCG_1642624A0A1W2PR95 340 aa19.34■□□□□ 0.69
SDCBP-201ENST00000260130 ASB14A6NK59 587 aa19.34■□□□□ 0.69
SDCBP-201ENST00000260130 NEK4P51957 841 aa19.34■□□□□ 0.69
SDCBP-201ENST00000260130 ARMCX2Q7L311 632 aa19.34■□□□□ 0.69
SDCBP-201ENST00000260130 V9GY48 417 aaPredicted RBP19.34■□□□□ 0.69
SDCBP-201ENST00000260130 CFBP00751 764 aa19.34■□□□□ 0.69
SDCBP-201ENST00000260130 RBM25P49756 843 aaKnown RBP19.34■□□□□ 0.69
SDCBP-201ENST00000260130 CCT2P78371 535 aaKnown RBP19.34■□□□□ 0.69
SDCBP-201ENST00000260130 ANKRD1Q15327 319 aa19.34■□□□□ 0.69
SDCBP-201ENST00000260130 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.34■□□□□ 0.69
SDCBP-201ENST00000260130 MAP3K20Q9NYL2 800 aaKnown RBP19.34■□□□□ 0.69
SDCBP-201ENST00000260130 AK2P54819 239 aa19.33■□□□□ 0.69
SDCBP-201ENST00000260130 GHRHRQ02643 423 aa19.33■□□□□ 0.69
SDCBP-201ENST00000260130 SAMD3Q8N6K7 520 aa19.33■□□□□ 0.69
SDCBP-201ENST00000260130 DNERQ8NFT8 737 aa19.33■□□□□ 0.69
SDCBP-201ENST00000260130 SYTL5Q8TDW5 730 aaPredicted RBP19.33■□□□□ 0.69
SDCBP-201ENST00000260130 PLXNA1Q9UIW2 1896 aa19.33■□□□□ 0.69
SDCBP-201ENST00000260130 TFRCP02786 760 aaKnown RBP19.33■□□□□ 0.68
SDCBP-201ENST00000260130 CAPN2P17655 700 aa19.33■□□□□ 0.68
SDCBP-201ENST00000260130 ALDH5A1P51649 535 aaPredicted RBP19.33■□□□□ 0.68
SDCBP-201ENST00000260130 CRISPLD2Q9H0B8 497 aa19.33■□□□□ 0.68
SDCBP-201ENST00000260130 ABHD16BQ9H3Z7 469 aa19.33■□□□□ 0.68
SDCBP-201ENST00000260130 KIAA0100Q14667 2235 aaKnown RBP19.33■□□□□ 0.68
SDCBP-201ENST00000260130 LOC102724159A0A0B4J2E5 919 aa19.32■□□□□ 0.68
SDCBP-201ENST00000260130 SEPT4O43236 478 aa19.32■□□□□ 0.68
SDCBP-201ENST00000260130 MSCO60682 206 aa19.32■□□□□ 0.68
SDCBP-201ENST00000260130 ZNF865P0CJ78 1059 aaPredicted RBP19.32■□□□□ 0.68
SDCBP-201ENST00000260130 HSD17B4P51659 736 aa19.32■□□□□ 0.68
SDCBP-201ENST00000260130 PWP2Q15269 919 aaKnown RBP19.32■□□□□ 0.68
SDCBP-201ENST00000260130 NCOA5Q9HCD5 579 aaKnown RBP19.32■□□□□ 0.68
SDCBP-201ENST00000260130 DDX20Q9UHI6 824 aaKnown RBP19.32■□□□□ 0.68
SDCBP-201ENST00000260130 RGS19P49795 217 aa19.32■□□□□ 0.68
SDCBP-201ENST00000260130 ACVR2BQ13705 512 aa19.32■□□□□ 0.68
SDCBP-201ENST00000260130 L1TD1Q5T7N2 865 aaKnown RBP19.32■□□□□ 0.68
SDCBP-201ENST00000260130 LHX8Q68G74 356 aa19.32■□□□□ 0.68
SDCBP-201ENST00000260130 MORC4Q8TE76 937 aa19.32■□□□□ 0.68
SDCBP-201ENST00000260130 SHISA4Q96DD7 197 aa19.32■□□□□ 0.68
SDCBP-201ENST00000260130 TAAR1Q96RJ0 339 aa19.32■□□□□ 0.68
SDCBP-201ENST00000260130 KIF2CQ99661 725 aa19.32■□□□□ 0.68
SDCBP-201ENST00000260130 COL20A1Q9P218 1284 aa19.32■□□□□ 0.68
SDCBP-201ENST00000260130 TPCN1Q9ULQ1 816 aa19.32■□□□□ 0.68
SDCBP-201ENST00000260130 MYH6P13533 1939 aa19.31■□□□□ 0.68
SDCBP-201ENST00000260130 GCOM1H8Y6P7 765 aaPredicted RBP19.31■□□□□ 0.68
SDCBP-201ENST00000260130 POLR2MP0CAP2 368 aa19.31■□□□□ 0.68
SDCBP-201ENST00000260130 STK3Q13188 491 aa19.31■□□□□ 0.68
SDCBP-201ENST00000260130 NTRK3Q16288 839 aa19.31■□□□□ 0.68
SDCBP-201ENST00000260130 HEATR3Q7Z4Q2 680 aa19.31■□□□□ 0.68
SDCBP-201ENST00000260130 DDX49Q9Y6V7 483 aaKnown RBP19.31■□□□□ 0.68
SDCBP-201ENST00000260130 IFNAR1P17181 557 aa19.3■□□□□ 0.68
SDCBP-201ENST00000260130 MPHOSPH6Q99547 160 aaKnown RBP19.3■□□□□ 0.68
SDCBP-201ENST00000260130 CHMP5Q9NZZ3 219 aa19.3■□□□□ 0.68
SDCBP-201ENST00000260130 ZHX1Q9UKY1 873 aaPredicted RBP19.3■□□□□ 0.68
SDCBP-201ENST00000260130 B4DLN1 442 aa19.3■□□□□ 0.68
SDCBP-201ENST00000260130 HOXA13P31271 388 aaPredicted RBP19.3■□□□□ 0.68
SDCBP-201ENST00000260130 MRPL12P52815 198 aaKnown RBP19.3■□□□□ 0.68
SDCBP-201ENST00000260130 HSCBQ8IWL3 235 aa19.3■□□□□ 0.68
SDCBP-201ENST00000260130 NSUN6Q8TEA1 469 aaKnown RBP19.3■□□□□ 0.68
SDCBP-201ENST00000260130 GPKOWQ92917 476 aaPredicted RBP eCLIP19.3■□□□□ 0.681e-6■□□□□ 11.3
SDCBP-201ENST00000260130 RMDN3Q96TC7 470 aa19.3■□□□□ 0.68
SDCBP-201ENST00000260130 KATNBL1Q9H079 304 aa19.3■□□□□ 0.68
SDCBP-201ENST00000260130 OGDHLQ9ULD0 1010 aa19.3■□□□□ 0.68
SDCBP-201ENST00000260130 RBBP6Q7Z6E9 1792 aaKnown RBP19.29■□□□□ 0.68
SDCBP-201ENST00000260130 PRPF3O43395 683 aaKnown RBP19.29■□□□□ 0.68
SDCBP-201ENST00000260130 PHKBQ93100 1093 aa19.29■□□□□ 0.68
SDCBP-201ENST00000260130 RBM27Q9P2N5 1060 aaKnown RBP19.29■□□□□ 0.68
SDCBP-201ENST00000260130 CPLX1O14810 134 aa19.29■□□□□ 0.68
SDCBP-201ENST00000260130 AKR1A1P14550 325 aa19.29■□□□□ 0.68
SDCBP-201ENST00000260130 EDNRBP24530 442 aa19.29■□□□□ 0.68
SDCBP-201ENST00000260130 WWC2Q6AWC2 1192 aa19.29■□□□□ 0.68
SDCBP-201ENST00000260130 PSTPIP2Q9H939 334 aa19.29■□□□□ 0.68
SDCBP-201ENST00000260130 FAM184BQ9ULE4 1060 aa19.29■□□□□ 0.68
SDCBP-201ENST00000260130 hCG_1984214I3L0E3 225 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms