RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 GPATCH4Q5T3I0 446 aaKnown RBP22.28■■□□□ 1.16
TM6SF1-201ENST00000258909 MROH7Q68CQ1 1323 aa22.28■■□□□ 1.16
TM6SF1-201ENST00000258909 TIMP1P01033 207 aa22.27■■□□□ 1.16
TM6SF1-201ENST00000258909 CCDC178Q5BJE1 867 aa22.27■■□□□ 1.16
TM6SF1-201ENST00000258909 FAM126BQ8IXS8 530 aa22.27■■□□□ 1.16
TM6SF1-201ENST00000258909 ANKS1AQ92625 1134 aa22.27■■□□□ 1.16
TM6SF1-201ENST00000258909 RNPC3Q96LT9 517 aaKnown RBP22.27■■□□□ 1.16
TM6SF1-201ENST00000258909 STXBP5LQ9Y2K9 1186 aa22.27■■□□□ 1.16
TM6SF1-201ENST00000258909 TNKSO95271 1327 aa22.27■■□□□ 1.16
TM6SF1-201ENST00000258909 WDR19Q8NEZ3 1342 aa22.27■■□□□ 1.16
TM6SF1-201ENST00000258909 CDC37Q16543 378 aaPredicted RBP22.26■■□□□ 1.15
TM6SF1-201ENST00000258909 FAM109BQ6ICB4 259 aaPredicted RBP22.26■■□□□ 1.15
TM6SF1-201ENST00000258909 GUCD1Q96NT3 240 aa22.26■■□□□ 1.15
TM6SF1-201ENST00000258909 PPP1R12CQ9BZL4 782 aa22.26■■□□□ 1.15
TM6SF1-201ENST00000258909 PSMC6P62333 389 aa22.25■■□□□ 1.15
TM6SF1-201ENST00000258909 ZNF697Q5TEC3 545 aa22.25■■□□□ 1.15
TM6SF1-201ENST00000258909 ADGRF4Q8IZF3 695 aa22.25■■□□□ 1.15
TM6SF1-201ENST00000258909 WDR11Q9BZH6 1224 aa22.25■■□□□ 1.15
TM6SF1-201ENST00000258909 KRT23Q9C075 422 aa22.25■■□□□ 1.15
TM6SF1-201ENST00000258909 VAT1LQ9HCJ6 419 aa22.25■■□□□ 1.15
TM6SF1-201ENST00000258909 PNMA2Q9UL42 364 aa22.25■■□□□ 1.15
TM6SF1-201ENST00000258909 CDH23Q9H251 3354 aa22.24■■□□□ 1.15
TM6SF1-201ENST00000258909 MYH6P13533 1939 aa22.24■■□□□ 1.15
TM6SF1-201ENST00000258909 GRIN2DO15399 1336 aa22.24■■□□□ 1.15
TM6SF1-201ENST00000258909 ITGA7Q13683 1181 aa22.24■■□□□ 1.15
TM6SF1-201ENST00000258909 DUSP28Q4G0W2 176 aa22.24■■□□□ 1.15
TM6SF1-201ENST00000258909 MFSD5Q6N075 450 aa22.24■■□□□ 1.15
TM6SF1-201ENST00000258909 TBC1D5Q92609 795 aa22.24■■□□□ 1.15
TM6SF1-201ENST00000258909 UBAC1Q9BSL1 405 aa22.24■■□□□ 1.15
TM6SF1-201ENST00000258909 Q9Y3F1 56 aa22.24■■□□□ 1.15
TM6SF1-201ENST00000258909 TLR3O15455 904 aaKnown RBP22.23■■□□□ 1.15
TM6SF1-201ENST00000258909 DHX16O60231 1041 aaKnown RBP22.23■■□□□ 1.15
TM6SF1-201ENST00000258909 ZEB2O60315 1214 aa22.23■■□□□ 1.15
TM6SF1-201ENST00000258909 NT5C2P49902 561 aa22.23■■□□□ 1.15
TM6SF1-201ENST00000258909 PDE4DQ08499 809 aa22.23■■□□□ 1.15
TM6SF1-201ENST00000258909 CYB5R4Q7L1T6 521 aa22.23■■□□□ 1.15
TM6SF1-201ENST00000258909 CNNM2Q9H8M5 875 aa22.23■■□□□ 1.15
TM6SF1-201ENST00000258909 CABYRO75952 493 aa22.22■■□□□ 1.15
TM6SF1-201ENST00000258909 CD4P01730 458 aa22.22■■□□□ 1.15
TM6SF1-201ENST00000258909 PARP1P09874 1014 aaKnown RBP22.22■■□□□ 1.15
TM6SF1-201ENST00000258909 CSF2RAP15509 400 aa22.22■■□□□ 1.15
TM6SF1-201ENST00000258909 SMAD3P84022 425 aaKnown RBP22.22■■□□□ 1.15
TM6SF1-201ENST00000258909 PTH1RQ03431 593 aa22.22■■□□□ 1.15
TM6SF1-201ENST00000258909 ASPRV1Q53RT3 343 aa22.22■■□□□ 1.15
TM6SF1-201ENST00000258909 SLC43A3Q8NBI5 491 aa22.22■■□□□ 1.15
TM6SF1-201ENST00000258909 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.22■■□□□ 1.15
TM6SF1-201ENST00000258909 EYSQ5T1H1 3165 aa22.22■■□□□ 1.15
TM6SF1-201ENST00000258909 LOC102724159A0A0B4J2E5 919 aa22.22■■□□□ 1.15
TM6SF1-201ENST00000258909 RBM47A0AV96 593 aaKnown RBP22.22■■□□□ 1.15
TM6SF1-201ENST00000258909 CHMLP26374 656 aa22.22■■□□□ 1.15
TM6SF1-201ENST00000258909 CYP2C18P33260 490 aa22.22■■□□□ 1.15
TM6SF1-201ENST00000258909 PWP2Q15269 919 aaKnown RBP22.22■■□□□ 1.15
TM6SF1-201ENST00000258909 QRICH1Q2TAL8 776 aa22.22■■□□□ 1.15
TM6SF1-201ENST00000258909 IFIT1BQ5T764 474 aaKnown RBP22.22■■□□□ 1.15
TM6SF1-201ENST00000258909 C16orf59Q7L2K0 433 aa22.22■■□□□ 1.15
TM6SF1-201ENST00000258909 TRPV6Q9H1D0 765 aa22.22■■□□□ 1.15
TM6SF1-201ENST00000258909 UNC80Q8N2C7 3258 aa22.21■■□□□ 1.15
TM6SF1-201ENST00000258909 ACRP10323 421 aa22.21■■□□□ 1.15
TM6SF1-201ENST00000258909 STAG2Q8N3U4 1231 aa22.21■■□□□ 1.15
TM6SF1-201ENST00000258909 DNERQ8NFT8 737 aa22.21■■□□□ 1.15
TM6SF1-201ENST00000258909 OR6J1Q8NGC5 347 aa22.21■■□□□ 1.15
TM6SF1-201ENST00000258909 COPS5Q92905 334 aa22.21■■□□□ 1.15
TM6SF1-201ENST00000258909 TTYH1Q9H313 450 aaPredicted RBP22.21■■□□□ 1.15
TM6SF1-201ENST00000258909 SEMA6BQ9H3T3 888 aa22.21■■□□□ 1.15
TM6SF1-201ENST00000258909 JMJD4Q9H9V9 463 aa22.21■■□□□ 1.15
TM6SF1-201ENST00000258909 ABCB11O95342 1321 aa22.2■■□□□ 1.14
TM6SF1-201ENST00000258909 UMODL1Q5DID0 1318 aa22.2■■□□□ 1.14
TM6SF1-201ENST00000258909 MYL3P08590 195 aa22.2■■□□□ 1.14
TM6SF1-201ENST00000258909 EDNRBP24530 442 aa22.2■■□□□ 1.14
TM6SF1-201ENST00000258909 TMEM199Q8N511 208 aa22.2■■□□□ 1.14
TM6SF1-201ENST00000258909 MPHOSPH6Q99547 160 aaKnown RBP22.2■■□□□ 1.14
TM6SF1-201ENST00000258909 COL20A1Q9P218 1284 aa22.2■■□□□ 1.14
TM6SF1-201ENST00000258909 RAD50Q92878 1312 aa22.19■■□□□ 1.14
TM6SF1-201ENST00000258909 B4GALT4O60513 344 aa22.19■■□□□ 1.14
TM6SF1-201ENST00000258909 CYP21A2P08686 494 aa22.19■■□□□ 1.14
TM6SF1-201ENST00000258909 PPIGQ13427 754 aaKnown RBP eCLIP22.19■■□□□ 1.14
TM6SF1-201ENST00000258909 SEC23AQ15436 765 aa22.19■■□□□ 1.14
TM6SF1-201ENST00000258909 FBXO11Q86XK2 927 aa22.19■■□□□ 1.14
TM6SF1-201ENST00000258909 RGS22Q8NE09 1264 aa22.19■■□□□ 1.14
TM6SF1-201ENST00000258909 SYTL5Q8TDW5 730 aaPredicted RBP22.19■■□□□ 1.14
TM6SF1-201ENST00000258909 PPP1R13LQ8WUF5 828 aa22.19■■□□□ 1.14
TM6SF1-201ENST00000258909 RUFY2Q8WXA3 655 aa22.19■■□□□ 1.14
TM6SF1-201ENST00000258909 TAAR1Q96RJ0 339 aa22.19■■□□□ 1.14
TM6SF1-201ENST00000258909 CDX2Q99626 313 aaPredicted RBP22.19■■□□□ 1.14
TM6SF1-201ENST00000258909 TAF6LQ9Y6J9 622 aa22.19■■□□□ 1.14
TM6SF1-201ENST00000258909 PPP2R5BQ15173 497 aa22.18■■□□□ 1.14
TM6SF1-201ENST00000258909 TMEM240Q5SV17 173 aa22.18■■□□□ 1.14
TM6SF1-201ENST00000258909 SCFD2Q8WU76 684 aa22.18■■□□□ 1.14
TM6SF1-201ENST00000258909 HIPK3Q9H422 1215 aa22.18■■□□□ 1.14
TM6SF1-201ENST00000258909 ARIH2O95376 493 aa22.17■■□□□ 1.14
TM6SF1-201ENST00000258909 TXNP10599 105 aaKnown RBP22.17■■□□□ 1.14
TM6SF1-201ENST00000258909 CPT1AP50416 773 aa22.17■■□□□ 1.14
TM6SF1-201ENST00000258909 PURAQ00577 322 aaKnown RBP22.17■■□□□ 1.14
TM6SF1-201ENST00000258909 TRDNQ13061 729 aa22.17■■□□□ 1.14
TM6SF1-201ENST00000258909 ZNF365Q70YC5 407 aa22.17■■□□□ 1.14
TM6SF1-201ENST00000258909 POLR3EQ9NVU0 708 aa22.17■■□□□ 1.14
TM6SF1-201ENST00000258909 BAZ2BQ9UIF8 2168 aaKnown RBP22.16■■□□□ 1.14
TM6SF1-201ENST00000258909 KLRF2D3W0D1 207 aa22.16■■□□□ 1.14
TM6SF1-201ENST00000258909 CCL23P55773 120 aa22.16■■□□□ 1.14
TM6SF1-201ENST00000258909 CHST3Q7LGC8 479 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms