RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 N4BP2L2Q92802 583 aaPredicted RBP12.76□□□□□ -0.37
TROAP-201ENST00000257909 CCDC114Q96M63 670 aa12.76□□□□□ -0.37
TROAP-201ENST00000257909 MLXIPQ9HAP2 919 aa12.76□□□□□ -0.37
TROAP-201ENST00000257909 RBM12Q9NTZ6 932 aaKnown RBP12.76□□□□□ -0.37
TROAP-201ENST00000257909 PNPLA7Q6ZV29 1317 aa12.76□□□□□ -0.37
TROAP-201ENST00000257909 KCPQ6ZWJ8 1503 aa12.76□□□□□ -0.37
TROAP-201ENST00000257909 GOLGA6L10A6NI86 522 aa12.76□□□□□ -0.37
TROAP-201ENST00000257909 E7EVH7 732 aa12.76□□□□□ -0.37
TROAP-201ENST00000257909 PDE8BO95263 885 aa12.76□□□□□ -0.37
TROAP-201ENST00000257909 GCFC2P16383 781 aaKnown RBP12.76□□□□□ -0.37
TROAP-201ENST00000257909 KIF11P52732 1056 aa12.76□□□□□ -0.37
TROAP-201ENST00000257909 NPY5RQ15761 445 aa12.76□□□□□ -0.37
TROAP-201ENST00000257909 IL17AQ16552 155 aa12.76□□□□□ -0.37
TROAP-201ENST00000257909 KRT26Q7Z3Y9 468 aa12.76□□□□□ -0.37
TROAP-201ENST00000257909 ZSCAN29Q8IWY8 852 aaPredicted RBP12.76□□□□□ -0.37
TROAP-201ENST00000257909 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.76□□□□□ -0.37
TROAP-201ENST00000257909 ESR2Q92731 530 aa12.76□□□□□ -0.37
TROAP-201ENST00000257909 DISC1Q9NRI5 854 aa12.76□□□□□ -0.37
TROAP-201ENST00000257909 NFU1Q9UMS0 254 aa12.76□□□□□ -0.37
TROAP-201ENST00000257909 TNKSO95271 1327 aa12.75□□□□□ -0.37
TROAP-201ENST00000257909 PJA2O43164 708 aa12.75□□□□□ -0.37
TROAP-201ENST00000257909 CALM1P0DP23 149 aa12.75□□□□□ -0.37
TROAP-201ENST00000257909 CALM2P0DP24 149 aa12.75□□□□□ -0.37
TROAP-201ENST00000257909 CALM3P0DP25 149 aa12.75□□□□□ -0.37
TROAP-201ENST00000257909 ITGA6P23229 1130 aa12.75□□□□□ -0.37
TROAP-201ENST00000257909 CXCR5P32302 372 aa12.75□□□□□ -0.37
TROAP-201ENST00000257909 MCM7P33993 719 aa12.75□□□□□ -0.37
TROAP-201ENST00000257909 PPP1R2P41236 205 aa12.75□□□□□ -0.37
TROAP-201ENST00000257909 MTIF2P46199 727 aaKnown RBP12.75□□□□□ -0.37
TROAP-201ENST00000257909 CARSP49589 748 aaKnown RBP12.75□□□□□ -0.37
TROAP-201ENST00000257909 KLK7P49862 253 aa12.75□□□□□ -0.37
TROAP-201ENST00000257909 SEC24CP53992 1094 aa12.75□□□□□ -0.37
TROAP-201ENST00000257909 CATIPQ7Z7H3 387 aa12.75□□□□□ -0.37
TROAP-201ENST00000257909 PARP9Q8IXQ6 854 aa12.75□□□□□ -0.37
TROAP-201ENST00000257909 PIK3R5Q8WYR1 880 aa12.75□□□□□ -0.37
TROAP-201ENST00000257909 FAM89AQ96GI7 184 aa12.75□□□□□ -0.37
TROAP-201ENST00000257909 NOC4LQ9BVI4 516 aaKnown RBP12.75□□□□□ -0.37
TROAP-201ENST00000257909 CENPHQ9H3R5 247 aa12.75□□□□□ -0.37
TROAP-201ENST00000257909 EPB41L5Q9HCM4 733 aa12.75□□□□□ -0.37
TROAP-201ENST00000257909 SLC4A4Q9Y6R1 1079 aa12.75□□□□□ -0.37
TROAP-201ENST00000257909 SHANK3Q9BYB0 1731 aa12.75□□□□□ -0.37
TROAP-201ENST00000257909 DOCK2Q92608 1830 aa12.75□□□□□ -0.37
TROAP-201ENST00000257909 SPATA31A3Q5VYP0 1347 aa12.75□□□□□ -0.37
TROAP-201ENST00000257909 ANKRD18BA2A2Z9 1011 aa12.75□□□□□ -0.37
TROAP-201ENST00000257909 HEXIM1O94992 359 aaKnown RBP12.75□□□□□ -0.37
TROAP-201ENST00000257909 GLI1P08151 1106 aa12.75□□□□□ -0.37
TROAP-201ENST00000257909 EZRP15311 586 aaKnown RBP12.75□□□□□ -0.37
TROAP-201ENST00000257909 IFFO1Q0D2I5 559 aa12.75□□□□□ -0.37
TROAP-201ENST00000257909 CHRNA2Q15822 529 aa12.75□□□□□ -0.37
TROAP-201ENST00000257909 TYW1BQ6NUM6 668 aa12.75□□□□□ -0.37
TROAP-201ENST00000257909 TAX1BP1Q86VP1 789 aa12.75□□□□□ -0.37
TROAP-201ENST00000257909 RNF10Q8N5U6 811 aaKnown RBP12.75□□□□□ -0.37
TROAP-201ENST00000257909 SPATA5Q8NB90 893 aa12.75□□□□□ -0.37
TROAP-201ENST00000257909 CABLES1Q8TDN4 633 aa12.75□□□□□ -0.37
TROAP-201ENST00000257909 CYFIP2Q96F07 1278 aa12.75□□□□□ -0.37
TROAP-201ENST00000257909 CNOT6LQ96LI5 555 aaKnown RBP12.75□□□□□ -0.37
TROAP-201ENST00000257909 DUSP9Q99956 384 aaKnown RBP12.75□□□□□ -0.37
TROAP-201ENST00000257909 TLR10Q9BXR5 811 aa12.75□□□□□ -0.37
TROAP-201ENST00000257909 PRKAB2O43741 272 aa12.74□□□□□ -0.37
TROAP-201ENST00000257909 KLRC4O43908 158 aa12.74□□□□□ -0.37
TROAP-201ENST00000257909 CCNE1P24864 410 aa12.74□□□□□ -0.37
TROAP-201ENST00000257909 CRYMQ14894 314 aa12.74□□□□□ -0.37
TROAP-201ENST00000257909 CYB5D1Q6P9G0 228 aa12.74□□□□□ -0.37
TROAP-201ENST00000257909 PIK3AP1Q6ZUJ8 805 aa12.74□□□□□ -0.37
TROAP-201ENST00000257909 ARMC9Q7Z3E5 817 aa12.74□□□□□ -0.37
TROAP-201ENST00000257909 CCDC47Q96A33 483 aaKnown RBP12.74□□□□□ -0.37
TROAP-201ENST00000257909 SGSM3Q96HU1 749 aa12.74□□□□□ -0.37
TROAP-201ENST00000257909 NOX5Q96PH1 765 aa12.74□□□□□ -0.37
TROAP-201ENST00000257909 PSMB7Q99436 277 aa12.74□□□□□ -0.37
TROAP-201ENST00000257909 SMARCAL1Q9NZC9 954 aa12.74□□□□□ -0.37
TROAP-201ENST00000257909 ARHGAP20Q9P2F6 1191 aa12.74□□□□□ -0.37
TROAP-201ENST00000257909 GRID2IPA4D2P6 1211 aa12.73□□□□□ -0.37
TROAP-201ENST00000257909 GMNCA6NCL1 334 aa12.73□□□□□ -0.37
TROAP-201ENST00000257909 AKR1B10O60218 316 aa12.73□□□□□ -0.37
TROAP-201ENST00000257909 PLEKP08567 350 aaPredicted RBP12.73□□□□□ -0.37
TROAP-201ENST00000257909 FAM153BP0C7A2 387 aa12.73□□□□□ -0.37
TROAP-201ENST00000257909 ERCC3P19447 782 aa12.73□□□□□ -0.37
TROAP-201ENST00000257909 SLC8A1P32418 973 aa12.73□□□□□ -0.37
TROAP-201ENST00000257909 SATB1Q01826 763 aa12.73□□□□□ -0.37
TROAP-201ENST00000257909 GUCY2DQ02846 1103 aa12.73□□□□□ -0.37
TROAP-201ENST00000257909 FAM153CQ494X1 144 aa12.73□□□□□ -0.37
TROAP-201ENST00000257909 LRIG3Q6UXM1 1119 aa12.73□□□□□ -0.37
TROAP-201ENST00000257909 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.73□□□□□ -0.37
TROAP-201ENST00000257909 C2CD5Q86YS7 1000 aa12.73□□□□□ -0.37
TROAP-201ENST00000257909 FUKQ8N0W3 1084 aa12.73□□□□□ -0.37
TROAP-201ENST00000257909 EIF1ADQ8N9N8 165 aaKnown RBP12.73□□□□□ -0.37
TROAP-201ENST00000257909 IFT81Q8WYA0 676 aa12.73□□□□□ -0.37
TROAP-201ENST00000257909 P3H4Q92791 437 aa12.73□□□□□ -0.37
TROAP-201ENST00000257909 P2RX5Q93086 422 aa12.73□□□□□ -0.37
TROAP-201ENST00000257909 EHD2Q9NZN4 543 aa12.73□□□□□ -0.37
TROAP-201ENST00000257909 FAM153AQ9UHL3 310 aa12.73□□□□□ -0.37
TROAP-201ENST00000257909 BCORQ6W2J9 1755 aa12.73□□□□□ -0.37
TROAP-201ENST00000257909 hCG_1642624A0A1W2PR95 340 aa12.73□□□□□ -0.37
TROAP-201ENST00000257909 PLEKHA8P1O95397 391 aa12.73□□□□□ -0.37
TROAP-201ENST00000257909 CSB-PGBD3P0DP91 1061 aa12.73□□□□□ -0.37
TROAP-201ENST00000257909 SCP2P22307 547 aa12.73□□□□□ -0.37
TROAP-201ENST00000257909 EIF4A3P38919 411 aaKnown RBP12.73□□□□□ -0.37
TROAP-201ENST00000257909 MAGEA1P43355 309 aa12.73□□□□□ -0.37
TROAP-201ENST00000257909 MIIPQ5JXC2 388 aa12.73□□□□□ -0.37
TROAP-201ENST00000257909 LPIN2Q92539 896 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms