RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 MLXIPLQ9NP71 852 aa13.61□□□□□ -0.23
USP30-201ENST00000257548 SNX12Q9UMY4 172 aa13.61□□□□□ -0.23
USP30-201ENST00000257548 MAGEB6P1A0A0J9YX57 407 aa13.61□□□□□ -0.23
USP30-201ENST00000257548 LGALS16A8MUM7 142 aa13.61□□□□□ -0.23
USP30-201ENST00000257548 DCAF17Q5H9S7 520 aaPredicted RBP13.61□□□□□ -0.23
USP30-201ENST00000257548 IGDCC4Q8TDY8 1250 aa13.61□□□□□ -0.23
USP30-201ENST00000257548 CTNNBL1Q8WYA6 563 aaPredicted RBP13.61□□□□□ -0.23
USP30-201ENST00000257548 MRRFQ96E11 262 aaKnown RBP13.61□□□□□ -0.23
USP30-201ENST00000257548 SLC40A1Q9NP59 571 aa13.61□□□□□ -0.23
USP30-201ENST00000257548 AATFQ9NY61 560 aaKnown RBP eCLIP13.61□□□□□ -0.23
USP30-201ENST00000257548 A6NNZ2 444 aa13.61□□□□□ -0.23
USP30-201ENST00000257548 KRIT1O00522 736 aa13.61□□□□□ -0.23
USP30-201ENST00000257548 PCK1P35558 622 aa13.61□□□□□ -0.23
USP30-201ENST00000257548 NAPAP54920 295 aa13.61□□□□□ -0.23
USP30-201ENST00000257548 TUBB8Q3ZCM7 444 aa13.61□□□□□ -0.23
USP30-201ENST00000257548 ALS2CLQ60I27 953 aa13.61□□□□□ -0.23
USP30-201ENST00000257548 TBC1D5Q92609 795 aa13.61□□□□□ -0.23
USP30-201ENST00000257548 MED15Q96RN5 788 aa13.61□□□□□ -0.23
USP30-201ENST00000257548 PYM1Q9BRP8 204 aaKnown RBP13.61□□□□□ -0.23
USP30-201ENST00000257548 UBXN6Q9BZV1 441 aa13.61□□□□□ -0.23
USP30-201ENST00000257548 YIPF3Q9GZM5 350 aa13.61□□□□□ -0.23
USP30-201ENST00000257548 CPSF2Q9P2I0 782 aaKnown RBP13.61□□□□□ -0.23
USP30-201ENST00000257548 USP17L12C9JPN9 530 aa13.6□□□□□ -0.23
USP30-201ENST00000257548 USP17L21D6R901 530 aa13.6□□□□□ -0.23
USP30-201ENST00000257548 GOLGA8HP0CJ92 632 aa13.6□□□□□ -0.23
USP30-201ENST00000257548 MAGOHP61326 146 aaKnown RBP13.6□□□□□ -0.23
USP30-201ENST00000257548 EARS2Q5JPH6 523 aaKnown RBP13.6□□□□□ -0.23
USP30-201ENST00000257548 PARP9Q8IXQ6 854 aa13.6□□□□□ -0.23
USP30-201ENST00000257548 MAGOHBQ96A72 148 aaKnown RBP13.6□□□□□ -0.23
USP30-201ENST00000257548 LRRC45Q96CN5 670 aa13.6□□□□□ -0.23
USP30-201ENST00000257548 DCAF5Q96JK2 942 aa13.6□□□□□ -0.23
USP30-201ENST00000257548 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.6□□□□□ -0.23
USP30-201ENST00000257548 ABCB4P21439 1286 aa13.6□□□□□ -0.23
USP30-201ENST00000257548 HERVK_113P62684 666 aa13.6□□□□□ -0.23
USP30-201ENST00000257548 FNBP4Q8N3X1 1017 aaPredicted RBP13.6□□□□□ -0.23
USP30-201ENST00000257548 KCNV2Q8TDN2 545 aa13.6□□□□□ -0.23
USP30-201ENST00000257548 STRBPQ96SI9 672 aaKnown RBP13.6□□□□□ -0.23
USP30-201ENST00000257548 TMOD3Q9NYL9 352 aa13.6□□□□□ -0.23
USP30-201ENST00000257548 RCCD1A6NED2 376 aa13.6□□□□□ -0.23
USP30-201ENST00000257548 NMT2O60551 498 aa13.6□□□□□ -0.23
USP30-201ENST00000257548 PALMO75781 387 aa13.6□□□□□ -0.23
USP30-201ENST00000257548 FGFR1OPO95684 399 aaKnown RBP13.6□□□□□ -0.23
USP30-201ENST00000257548 STARD3NLO95772 234 aa13.6□□□□□ -0.23
USP30-201ENST00000257548 FAM153BP0C7A2 387 aa13.6□□□□□ -0.23
USP30-201ENST00000257548 FOXO4P98177 505 aa13.6□□□□□ -0.23
USP30-201ENST00000257548 FAM153CQ494X1 144 aa13.6□□□□□ -0.23
USP30-201ENST00000257548 DNAAF5Q86Y56 855 aa13.6□□□□□ -0.23
USP30-201ENST00000257548 ELAC2Q9BQ52 826 aaKnown RBP13.6□□□□□ -0.23
USP30-201ENST00000257548 DDX47Q9H0S4 455 aaKnown RBP13.6□□□□□ -0.23
USP30-201ENST00000257548 FAM153AQ9UHL3 310 aa13.6□□□□□ -0.23
USP30-201ENST00000257548 PSMD14O00487 310 aa13.59□□□□□ -0.23
USP30-201ENST00000257548 PHKG2P15735 406 aa13.59□□□□□ -0.23
USP30-201ENST00000257548 DHX9Q08211 1270 aaKnown RBP13.59□□□□□ -0.23
USP30-201ENST00000257548 CABP7Q86V35 215 aa13.59□□□□□ -0.23
USP30-201ENST00000257548 CPVLQ9H3G5 476 aa13.59□□□□□ -0.23
USP30-201ENST00000257548 FCER1AP12319 257 aa13.59□□□□□ -0.23
USP30-201ENST00000257548 KIF5BP33176 963 aa13.59□□□□□ -0.23
USP30-201ENST00000257548 MKRN4PQ13434 485 aaPredicted RBP13.59□□□□□ -0.23
USP30-201ENST00000257548 SUGP1Q8IWZ8 645 aaKnown RBP13.59□□□□□ -0.23
USP30-201ENST00000257548 MDM1Q8TC05 714 aa13.59□□□□□ -0.23
USP30-201ENST00000257548 EPN3Q9H201 632 aa13.59□□□□□ -0.23
USP30-201ENST00000257548 CEMIPQ8WUJ3 1361 aa13.59□□□□□ -0.23
USP30-201ENST00000257548 LRRC53A6NM62 1247 aa13.59□□□□□ -0.23
USP30-201ENST00000257548 CYP27B1O15528 508 aa13.59□□□□□ -0.23
USP30-201ENST00000257548 CACNB1Q02641 598 aaPredicted RBP13.59□□□□□ -0.23
USP30-201ENST00000257548 MCM9Q9NXL9 1143 aa13.59□□□□□ -0.23
USP30-201ENST00000257548 GMNCA6NCL1 334 aa13.58□□□□□ -0.24
USP30-201ENST00000257548 EEF1GP26641 437 aaKnown RBP13.58□□□□□ -0.24
USP30-201ENST00000257548 MDH1P40925 334 aaKnown RBP13.58□□□□□ -0.24
USP30-201ENST00000257548 LIFRP42702 1097 aa13.58□□□□□ -0.24
USP30-201ENST00000257548 SLC1A4P43007 532 aa13.58□□□□□ -0.24
USP30-201ENST00000257548 PEX26Q7Z412 305 aa13.58□□□□□ -0.24
USP30-201ENST00000257548 VPS36Q86VN1 386 aa13.58□□□□□ -0.24
USP30-201ENST00000257548 CCDC155Q8N6L0 562 aa13.58□□□□□ -0.24
USP30-201ENST00000257548 TARSL2A2RTX5 802 aaKnown RBP13.58□□□□□ -0.24
USP30-201ENST00000257548 PMS1P54277 932 aaKnown RBP13.58□□□□□ -0.24
USP30-201ENST00000257548 SESN3P58005 492 aa13.58□□□□□ -0.24
USP30-201ENST00000257548 SFMBT2Q5VUG0 894 aa13.58□□□□□ -0.24
USP30-201ENST00000257548 MAEAQ7L5Y9 396 aa13.58□□□□□ -0.24
USP30-201ENST00000257548 NKX2-3Q8TAU0 364 aa13.58□□□□□ -0.24
USP30-201ENST00000257548 MYCBPAPQ8TBZ2 947 aa13.58□□□□□ -0.24
USP30-201ENST00000257548 GLI1P08151 1106 aa13.57□□□□□ -0.24
USP30-201ENST00000257548 MDM2Q00987 491 aaPredicted RBP13.57□□□□□ -0.24
USP30-201ENST00000257548 OTUD6AQ7L8S5 288 aa13.57□□□□□ -0.24
USP30-201ENST00000257548 ZNF444Q8N0Y2 327 aaPredicted RBP13.57□□□□□ -0.24
USP30-201ENST00000257548 P2RX5Q93086 422 aa13.57□□□□□ -0.24
USP30-201ENST00000257548 HVCN1Q96D96 273 aa13.57□□□□□ -0.24
USP30-201ENST00000257548 ATP6V1G3Q96LB4 118 aa13.57□□□□□ -0.24
USP30-201ENST00000257548 LSM14BQ9BX40 385 aaKnown RBP13.57□□□□□ -0.24
USP30-201ENST00000257548 DONSONQ9NYP3 566 aa13.57□□□□□ -0.24
USP30-201ENST00000257548 SEC63Q9UGP8 760 aaKnown RBP13.57□□□□□ -0.24
USP30-201ENST00000257548 SSR1P43307 286 aaKnown RBP13.57□□□□□ -0.24
USP30-201ENST00000257548 CCDC84Q86UT8 332 aaPredicted RBP13.57□□□□□ -0.24
USP30-201ENST00000257548 SPATS2Q86XZ4 545 aaKnown RBP13.57□□□□□ -0.24
USP30-201ENST00000257548 DNAJC10Q8IXB1 793 aa13.57□□□□□ -0.24
USP30-201ENST00000257548 ZNF622Q969S3 477 aaKnown RBP eCLIP13.57□□□□□ -0.24
USP30-201ENST00000257548 NWD1Q149M9 1564 aa13.57□□□□□ -0.24
USP30-201ENST00000257548 RTL9Q8NET4 1388 aa13.57□□□□□ -0.24
USP30-201ENST00000257548 ANKRD62A6NC57 917 aa13.57□□□□□ -0.24
USP30-201ENST00000257548 H7C1W4 665 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms