RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 EEPD1Q7L9B9 569 aa20.83■□□□□ 0.93
SNRPA1-201ENST00000254193 ARRDC4Q8NCT1 418 aa20.83■□□□□ 0.93
SNRPA1-201ENST00000254193 SYTL5Q8TDW5 730 aaPredicted RBP20.83■□□□□ 0.93
SNRPA1-201ENST00000254193 SPZ1Q9BXG8 430 aa20.83■□□□□ 0.93
SNRPA1-201ENST00000254193 XPNPEP3Q9NQH7 507 aa20.83■□□□□ 0.93
SNRPA1-201ENST00000254193 COL20A1Q9P218 1284 aa20.83■□□□□ 0.93
SNRPA1-201ENST00000254193 KLF18A0A0U1RQI7 1052 aa20.82■□□□□ 0.92
SNRPA1-201ENST00000254193 DNM1LO00429 736 aa20.82■□□□□ 0.92
SNRPA1-201ENST00000254193 CASTP20810 708 aaKnown RBP20.82■□□□□ 0.92
SNRPA1-201ENST00000254193 RPS6KB1P23443 525 aa20.82■□□□□ 0.92
SNRPA1-201ENST00000254193 Q6ZUG5 572 aa20.82■□□□□ 0.92
SNRPA1-201ENST00000254193 CCDC82Q8N4S0 544 aa20.82■□□□□ 0.92
SNRPA1-201ENST00000254193 MORC4Q8TE76 937 aa20.82■□□□□ 0.92
SNRPA1-201ENST00000254193 RRP36Q96EU6 259 aaKnown RBP20.82■□□□□ 0.92
SNRPA1-201ENST00000254193 ZBTB43O43298 467 aa20.81■□□□□ 0.92
SNRPA1-201ENST00000254193 ADCY6O43306 1168 aa20.81■□□□□ 0.92
SNRPA1-201ENST00000254193 CFBP00751 764 aa20.81■□□□□ 0.92
SNRPA1-201ENST00000254193 SMARCA1P28370 1054 aa20.81■□□□□ 0.92
SNRPA1-201ENST00000254193 LRRC41Q15345 812 aa20.81■□□□□ 0.92
SNRPA1-201ENST00000254193 TMTC3Q6ZXV5 915 aa20.81■□□□□ 0.92
SNRPA1-201ENST00000254193 FBXO16Q8IX29 292 aaPredicted RBP20.81■□□□□ 0.92
SNRPA1-201ENST00000254193 TAAR1Q96RJ0 339 aa20.81■□□□□ 0.92
SNRPA1-201ENST00000254193 PDGFCQ9NRA1 345 aa20.81■□□□□ 0.92
SNRPA1-201ENST00000254193 NAP1L2Q9ULW6 460 aaPredicted RBP20.81■□□□□ 0.92
SNRPA1-201ENST00000254193 MKI67P46013 3256 aaKnown RBP20.8■□□□□ 0.92
SNRPA1-201ENST00000254193 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.8■□□□□ 0.92
SNRPA1-201ENST00000254193 ADCYAP1R1P41586 468 aa20.8■□□□□ 0.92
SNRPA1-201ENST00000254193 APOBRQ0VD83 1088 aa20.8■□□□□ 0.92
SNRPA1-201ENST00000254193 DNERQ8NFT8 737 aa20.8■□□□□ 0.92
SNRPA1-201ENST00000254193 BRF1Q92994 677 aa20.8■□□□□ 0.92
SNRPA1-201ENST00000254193 SENP6Q9GZR1 1112 aaPredicted RBP20.8■□□□□ 0.92
SNRPA1-201ENST00000254193 MAF1Q9H063 256 aa20.8■□□□□ 0.92
SNRPA1-201ENST00000254193 hCG_1642624A0A1W2PR95 340 aa20.79■□□□□ 0.92
SNRPA1-201ENST00000254193 KBTBD13C9JR72 458 aa20.79■□□□□ 0.92
SNRPA1-201ENST00000254193 DUSP11O75319 330 aaKnown RBP20.79■□□□□ 0.92
SNRPA1-201ENST00000254193 HSD17B4P51659 736 aa20.79■□□□□ 0.92
SNRPA1-201ENST00000254193 PDE4DQ08499 809 aa20.79■□□□□ 0.92
SNRPA1-201ENST00000254193 TRAF1Q13077 416 aa20.79■□□□□ 0.92
SNRPA1-201ENST00000254193 RTN1Q16799 776 aa20.79■□□□□ 0.92
SNRPA1-201ENST00000254193 TAPT1Q6NXT6 567 aa20.79■□□□□ 0.92
SNRPA1-201ENST00000254193 NOL8Q76FK4 1167 aaKnown RBP20.79■□□□□ 0.92
SNRPA1-201ENST00000254193 ZSWIM6Q9HCJ5 1215 aa20.79■□□□□ 0.92
SNRPA1-201ENST00000254193 VTA1Q9NP79 307 aa20.79■□□□□ 0.92
SNRPA1-201ENST00000254193 SEC63Q9UGP8 760 aaKnown RBP20.79■□□□□ 0.92
SNRPA1-201ENST00000254193 SYNRGQ9UMZ2 1314 aa20.78■□□□□ 0.92
SNRPA1-201ENST00000254193 LOC102724159A0A0B4J2E5 919 aa20.78■□□□□ 0.92
SNRPA1-201ENST00000254193 GOLGA8AA7E2F4 631 aa20.78■□□□□ 0.92
SNRPA1-201ENST00000254193 GOLGA8BA8MQT2 603 aa20.78■□□□□ 0.92
SNRPA1-201ENST00000254193 ADAMTS4O75173 837 aa20.78■□□□□ 0.92
SNRPA1-201ENST00000254193 PTGS1P23219 599 aa20.78■□□□□ 0.92
SNRPA1-201ENST00000254193 EDNRBP24530 442 aa20.78■□□□□ 0.92
SNRPA1-201ENST00000254193 HOXA13P31271 388 aaPredicted RBP20.78■□□□□ 0.92
SNRPA1-201ENST00000254193 IRX5P78411 483 aaPredicted RBP20.78■□□□□ 0.92
SNRPA1-201ENST00000254193 TNFAIP2Q03169 654 aa20.78■□□□□ 0.92
SNRPA1-201ENST00000254193 PWP2Q15269 919 aaKnown RBP20.78■□□□□ 0.92
SNRPA1-201ENST00000254193 TMEM63BQ5T3F8 832 aa20.78■□□□□ 0.92
SNRPA1-201ENST00000254193 RNF180Q86T96 592 aa20.78■□□□□ 0.92
SNRPA1-201ENST00000254193 NSUN6Q8TEA1 469 aaKnown RBP20.78■□□□□ 0.92
SNRPA1-201ENST00000254193 RMDN3Q96TC7 470 aa20.78■□□□□ 0.92
SNRPA1-201ENST00000254193 FAM217BQ9NTX9 383 aaPredicted RBP20.78■□□□□ 0.92
SNRPA1-201ENST00000254193 RBM28Q9NW13 759 aaKnown RBP20.78■□□□□ 0.92
SNRPA1-201ENST00000254193 ZNFX1Q9P2E3 1918 aaKnown RBP20.78■□□□□ 0.92
SNRPA1-201ENST00000254193 MYADML2A6NDP7 307 aa20.77■□□□□ 0.92
SNRPA1-201ENST00000254193 H0YGN5 161 aa20.77■□□□□ 0.92
SNRPA1-201ENST00000254193 EVI5O60447 810 aa20.77■□□□□ 0.92
SNRPA1-201ENST00000254193 SMPD1P17405 629 aa20.77■□□□□ 0.92
SNRPA1-201ENST00000254193 GHRHRQ02643 423 aa20.77■□□□□ 0.92
SNRPA1-201ENST00000254193 PRPF38BQ5VTL8 546 aaKnown RBP20.77■□□□□ 0.92
SNRPA1-201ENST00000254193 RUFY3Q7L099 469 aa20.77■□□□□ 0.92
SNRPA1-201ENST00000254193 FERMT2Q96AC1 680 aa20.77■□□□□ 0.92
SNRPA1-201ENST00000254193 UPF3BQ9BZI7 483 aaKnown RBP20.77■□□□□ 0.92
SNRPA1-201ENST00000254193 CYP46A1Q9Y6A2 500 aa20.77■□□□□ 0.92
SNRPA1-201ENST00000254193 SMCHD1A6NHR9 2005 aa20.77■□□□□ 0.91
SNRPA1-201ENST00000254193 GCOM1H8Y6P7 765 aaPredicted RBP20.76■□□□□ 0.91
SNRPA1-201ENST00000254193 SEC24BO95487 1268 aa20.76■□□□□ 0.91
SNRPA1-201ENST00000254193 POLR2MP0CAP2 368 aa20.76■□□□□ 0.91
SNRPA1-201ENST00000254193 CDC27P30260 824 aa20.76■□□□□ 0.91
SNRPA1-201ENST00000254193 ATN1P54259 1190 aaPredicted RBP20.76■□□□□ 0.91
SNRPA1-201ENST00000254193 FUT2Q10981 343 aa20.76■□□□□ 0.91
SNRPA1-201ENST00000254193 LRRC26Q2I0M4 334 aa20.76■□□□□ 0.91
SNRPA1-201ENST00000254193 ARHGEF16Q5VV41 709 aa20.76■□□□□ 0.91
SNRPA1-201ENST00000254193 IQSEC1Q6DN90 963 aa20.76■□□□□ 0.91
SNRPA1-201ENST00000254193 FBXL16Q8N461 479 aa20.76■□□□□ 0.91
SNRPA1-201ENST00000254193 MPHOSPH6Q99547 160 aaKnown RBP20.76■□□□□ 0.91
SNRPA1-201ENST00000254193 AGXT2Q9BYV1 514 aa20.76■□□□□ 0.91
SNRPA1-201ENST00000254193 TM6SF1Q9BZW5 370 aa20.76■□□□□ 0.91
SNRPA1-201ENST00000254193 PDE4DIPQ5VU43 2346 aa20.75■□□□□ 0.91
SNRPA1-201ENST00000254193 B4DLN1 442 aa20.75■□□□□ 0.91
SNRPA1-201ENST00000254193 C6orf222P0C671 652 aaPredicted RBP20.75■□□□□ 0.91
SNRPA1-201ENST00000254193 EIF2AK2P19525 551 aaKnown RBP20.75■□□□□ 0.91
SNRPA1-201ENST00000254193 METAP2P50579 478 aaKnown RBP eCLIP20.75■□□□□ 0.91
SNRPA1-201ENST00000254193 MRPL12P52815 198 aaKnown RBP20.75■□□□□ 0.91
SNRPA1-201ENST00000254193 RCAN1P53805 252 aa20.75■□□□□ 0.91
SNRPA1-201ENST00000254193 KLHDC9Q8NEP7 349 aa20.75■□□□□ 0.91
SNRPA1-201ENST00000254193 PHF24Q9UPV7 400 aa20.75■□□□□ 0.91
SNRPA1-201ENST00000254193 GNEQ9Y223 722 aaKnown RBP20.75■□□□□ 0.91
SNRPA1-201ENST00000254193 NR2E3Q9Y5X4 410 aa20.75■□□□□ 0.91
SNRPA1-201ENST00000254193 TNRC18O15417 2968 aaPredicted RBP20.75■□□□□ 0.91
SNRPA1-201ENST00000254193 PLXNA1Q9UIW2 1896 aa20.75■□□□□ 0.91
SNRPA1-201ENST00000254193 CNTNAP5Q8WYK1 1306 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms