RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 IFT88Q13099 833 aa19.39■□□□□ 0.7
NDFIP1-201ENST00000253814 POTEDQ86YR6 584 aa19.39■□□□□ 0.7
NDFIP1-201ENST00000253814 MYOCDQ8IZQ8 938 aa19.39■□□□□ 0.7
NDFIP1-201ENST00000253814 STAG2Q8N3U4 1231 aa19.39■□□□□ 0.7
NDFIP1-201ENST00000253814 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.39■□□□□ 0.69
NDFIP1-201ENST00000253814 FOXR1Q6PIV2 292 aa19.39■□□□□ 0.69
NDFIP1-201ENST00000253814 TBC1D5Q92609 795 aa19.39■□□□□ 0.69
NDFIP1-201ENST00000253814 LRRC1Q9BTT6 524 aa19.39■□□□□ 0.69
NDFIP1-201ENST00000253814 PHF20Q9BVI0 1012 aa19.39■□□□□ 0.69
NDFIP1-201ENST00000253814 ABCB4P21439 1286 aa19.39■□□□□ 0.69
NDFIP1-201ENST00000253814 NNTQ13423 1086 aa19.39■□□□□ 0.69
NDFIP1-201ENST00000253814 TXNRD1Q16881 649 aa19.39■□□□□ 0.69
NDFIP1-201ENST00000253814 NBPF3Q9H094 633 aa19.39■□□□□ 0.69
NDFIP1-201ENST00000253814 LIMA1Q9UHB6 759 aaKnown RBP19.39■□□□□ 0.69
NDFIP1-201ENST00000253814 GOLGA6L10A0A0M3HER8 536 aa19.38■□□□□ 0.69
NDFIP1-201ENST00000253814 ERFEQ4G0M1 354 aa19.38■□□□□ 0.69
NDFIP1-201ENST00000253814 PEX26Q7Z412 305 aa19.38■□□□□ 0.69
NDFIP1-201ENST00000253814 THAP9Q9H5L6 903 aa19.38■□□□□ 0.69
NDFIP1-201ENST00000253814 EHD2Q9NZN4 543 aa19.38■□□□□ 0.69
NDFIP1-201ENST00000253814 ADAMTS1Q9UHI8 967 aa19.38■□□□□ 0.69
NDFIP1-201ENST00000253814 PACSIN2Q9UNF0 486 aaPredicted RBP19.38■□□□□ 0.69
NDFIP1-201ENST00000253814 SLIT1O75093 1534 aa19.38■□□□□ 0.69
NDFIP1-201ENST00000253814 RFC4P35249 363 aa19.38■□□□□ 0.69
NDFIP1-201ENST00000253814 EPHB4P54760 987 aa19.38■□□□□ 0.69
NDFIP1-201ENST00000253814 TBX2Q13207 712 aaPredicted RBP19.38■□□□□ 0.69
NDFIP1-201ENST00000253814 TMC4Q7Z404 712 aa19.38■□□□□ 0.69
NDFIP1-201ENST00000253814 CCDC170Q8IYT3 715 aa19.38■□□□□ 0.69
NDFIP1-201ENST00000253814 COA7Q96BR5 231 aa19.38■□□□□ 0.69
NDFIP1-201ENST00000253814 MEGF6O75095 1541 aa19.38■□□□□ 0.69
NDFIP1-201ENST00000253814 NF2P35240 595 aa19.38■□□□□ 0.69
NDFIP1-201ENST00000253814 ADCY7P51828 1080 aa19.38■□□□□ 0.69
NDFIP1-201ENST00000253814 SH2D3CQ8N5H7 860 aa19.38■□□□□ 0.69
NDFIP1-201ENST00000253814 PCDHB13Q9Y5F0 798 aa19.38■□□□□ 0.69
NDFIP1-201ENST00000253814 FAM169AQ9Y6X4 670 aa19.38■□□□□ 0.69
NDFIP1-201ENST00000253814 MON2Q7Z3U7 1717 aa19.38■□□□□ 0.69
NDFIP1-201ENST00000253814 GBP2P32456 591 aaPredicted RBP19.37■□□□□ 0.69
NDFIP1-201ENST00000253814 GFPT1Q06210 699 aaPredicted RBP19.37■□□□□ 0.69
NDFIP1-201ENST00000253814 SMIM5Q71RC9 77 aa19.37■□□□□ 0.69
NDFIP1-201ENST00000253814 EFCAB13Q8IY85 973 aa19.37■□□□□ 0.69
NDFIP1-201ENST00000253814 ANKRD2Q9GZV1 360 aa19.37■□□□□ 0.69
NDFIP1-201ENST00000253814 XDHP47989 1333 aa19.37■□□□□ 0.69
NDFIP1-201ENST00000253814 PFKFB3Q16875 520 aaPredicted RBP19.37■□□□□ 0.69
NDFIP1-201ENST00000253814 LARP4BQ92615 738 aaKnown RBP19.37■□□□□ 0.69
NDFIP1-201ENST00000253814 A0A087WUV0 522 aaPredicted RBP19.37■□□□□ 0.69
NDFIP1-201ENST00000253814 GNPATO15228 680 aa19.37■□□□□ 0.69
NDFIP1-201ENST00000253814 VIMP08670 466 aaKnown RBP19.37■□□□□ 0.69
NDFIP1-201ENST00000253814 UBE4AQ14139 1066 aa19.37■□□□□ 0.69
NDFIP1-201ENST00000253814 MSL1Q68DK7 614 aa19.37■□□□□ 0.69
NDFIP1-201ENST00000253814 ATP8A2Q9NTI2 1148 aa19.37■□□□□ 0.69
NDFIP1-201ENST00000253814 LOC102724428A0A0B4J2F2 783 aa19.36■□□□□ 0.69
NDFIP1-201ENST00000253814 LRRC53A6NM62 1247 aa19.36■□□□□ 0.69
NDFIP1-201ENST00000253814 SIK1P57059 783 aa19.36■□□□□ 0.69
NDFIP1-201ENST00000253814 ANKRD40Q6AI12 368 aa19.36■□□□□ 0.69
NDFIP1-201ENST00000253814 ZNF804AQ7Z570 1209 aa19.36■□□□□ 0.69
NDFIP1-201ENST00000253814 RICTORQ6R327 1708 aa19.36■□□□□ 0.69
NDFIP1-201ENST00000253814 FAM26FQ5R3K3 315 aa19.36■□□□□ 0.69
NDFIP1-201ENST00000253814 ARL6IP4Q66PJ3 421 aaKnown RBP19.36■□□□□ 0.69
NDFIP1-201ENST00000253814 CCDC91Q7Z6B0 441 aa19.36■□□□□ 0.69
NDFIP1-201ENST00000253814 FAM133AQ8N9E0 248 aa19.36■□□□□ 0.69
NDFIP1-201ENST00000253814 RETREG2Q8NC44 543 aa19.36■□□□□ 0.69
NDFIP1-201ENST00000253814 PIGSQ96S52 555 aa19.36■□□□□ 0.69
NDFIP1-201ENST00000253814 PAIP2Q9BPZ3 127 aaKnown RBP19.36■□□□□ 0.69
NDFIP1-201ENST00000253814 LACRTQ9GZZ8 138 aa19.36■□□□□ 0.69
NDFIP1-201ENST00000253814 STIM2Q9P246 746 aa19.36■□□□□ 0.69
NDFIP1-201ENST00000253814 TADA2BQ86TJ2 420 aa19.36■□□□□ 0.69
NDFIP1-201ENST00000253814 FNBP4Q8N3X1 1017 aaPredicted RBP19.36■□□□□ 0.69
NDFIP1-201ENST00000253814 CHMP2AO43633 222 aa19.35■□□□□ 0.69
NDFIP1-201ENST00000253814 PLEKP08567 350 aaPredicted RBP19.35■□□□□ 0.69
NDFIP1-201ENST00000253814 CYP19A1P11511 503 aaPredicted RBP19.35■□□□□ 0.69
NDFIP1-201ENST00000253814 MRPL12P52815 198 aaKnown RBP19.35■□□□□ 0.69
NDFIP1-201ENST00000253814 LLGL1Q15334 1064 aa19.35■□□□□ 0.69
NDFIP1-201ENST00000253814 MAN2A1Q16706 1144 aa19.35■□□□□ 0.69
NDFIP1-201ENST00000253814 RDH13Q8NBN7 331 aa19.35■□□□□ 0.69
NDFIP1-201ENST00000253814 ERMNQ8TAM6 284 aa19.35■□□□□ 0.69
NDFIP1-201ENST00000253814 SPATA31A3Q5VYP0 1347 aa19.35■□□□□ 0.69
NDFIP1-201ENST00000253814 STK4Q13043 487 aa19.35■□□□□ 0.69
NDFIP1-201ENST00000253814 NKX2-3Q8TAU0 364 aa19.35■□□□□ 0.69
NDFIP1-201ENST00000253814 LMBR1Q8WVP7 490 aa19.35■□□□□ 0.69
NDFIP1-201ENST00000253814 DCP1AQ9NPI6 582 aaPredicted RBP19.35■□□□□ 0.69
NDFIP1-201ENST00000253814 KCND1Q9NSA2 647 aa19.35■□□□□ 0.69
NDFIP1-201ENST00000253814 PCDHA12Q9UN75 941 aa19.35■□□□□ 0.69
NDFIP1-201ENST00000253814 CDHR2Q9BYE9 1310 aa19.35■□□□□ 0.69
NDFIP1-201ENST00000253814 POTEMA6NI47 508 aa19.35■□□□□ 0.69
NDFIP1-201ENST00000253814 KRIT1O00522 736 aa19.35■□□□□ 0.69
NDFIP1-201ENST00000253814 GPBP1Q86WP2 473 aa19.35■□□□□ 0.69
NDFIP1-201ENST00000253814 SLF2Q8IX21 1173 aa19.35■□□□□ 0.69
NDFIP1-201ENST00000253814 MS4A14Q96JA4 679 aa19.35■□□□□ 0.69
NDFIP1-201ENST00000253814 GPR101Q96P66 508 aaPredicted RBP19.35■□□□□ 0.69
NDFIP1-201ENST00000253814 HSD3B7Q9H2F3 369 aa19.35■□□□□ 0.69
NDFIP1-201ENST00000253814 TMEM60Q9H2L4 133 aa19.35■□□□□ 0.69
NDFIP1-201ENST00000253814 PNMA8AQ86V59 439 aaPredicted RBP19.34■□□□□ 0.69
NDFIP1-201ENST00000253814 SPATA4Q8NEY3 305 aa19.34■□□□□ 0.69
NDFIP1-201ENST00000253814 U2AF1L4Q8WU68 220 aaKnown RBP19.34■□□□□ 0.69
NDFIP1-201ENST00000253814 LRRC45Q96CN5 670 aa19.34■□□□□ 0.69
NDFIP1-201ENST00000253814 PANK4Q9NVE7 773 aa19.34■□□□□ 0.69
NDFIP1-201ENST00000253814 CAPN11Q9UMQ6 739 aa19.34■□□□□ 0.69
NDFIP1-201ENST00000253814 MUM1L1Q5H9M0 696 aa19.34■□□□□ 0.69
NDFIP1-201ENST00000253814 ADSSL1Q8N142 457 aa19.34■□□□□ 0.69
NDFIP1-201ENST00000253814 CCDC26Q8TAB7 109 aa19.34■□□□□ 0.69
NDFIP1-201ENST00000253814 OSBPL9Q96SU4 736 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms