RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 MRPL11Q9Y3B7 192 aaKnown RBP26.69■■□□□ 1.86
LSM4-201ENST00000252816 BAZ2BQ9UIF8 2168 aaKnown RBP26.68■■□□□ 1.86
LSM4-201ENST00000252816 LOC102724159A0A0B4J2E5 919 aa26.68■■□□□ 1.86
LSM4-201ENST00000252816 PWP2Q15269 919 aaKnown RBP26.68■■□□□ 1.86
LSM4-201ENST00000252816 CHRDL2Q6WN34 429 aa26.68■■□□□ 1.86
LSM4-201ENST00000252816 NFXL1Q6ZNB6 911 aa26.68■■□□□ 1.86
LSM4-201ENST00000252816 HOMER1Q86YM7 354 aa26.68■■□□□ 1.86
LSM4-201ENST00000252816 TMTC2Q8N394 836 aa26.68■■□□□ 1.86
LSM4-201ENST00000252816 MAP3K14Q99558 947 aa26.68■■□□□ 1.86
LSM4-201ENST00000252816 UPF3AQ9H1J1 476 aaKnown RBP26.68■■□□□ 1.86
LSM4-201ENST00000252816 COL20A1Q9P218 1284 aa26.68■■□□□ 1.86
LSM4-201ENST00000252816 PCDH10Q9P2E7 1040 aa26.68■■□□□ 1.86
LSM4-201ENST00000252816 MYH6P13533 1939 aa26.68■■□□□ 1.86
LSM4-201ENST00000252816 OPLAHO14841 1288 aa26.67■■□□□ 1.86
LSM4-201ENST00000252816 PTGS1P23219 599 aa26.67■■□□□ 1.86
LSM4-201ENST00000252816 TNFAIP2Q03169 654 aa26.67■■□□□ 1.86
LSM4-201ENST00000252816 TMEM63BQ5T3F8 832 aa26.67■■□□□ 1.86
LSM4-201ENST00000252816 CCSAPQ6IQ19 270 aaPredicted RBP26.67■■□□□ 1.86
LSM4-201ENST00000252816 SLC39A5Q6ZMH5 540 aa26.67■■□□□ 1.86
LSM4-201ENST00000252816 SYTL5Q8TDW5 730 aaPredicted RBP26.67■■□□□ 1.86
LSM4-201ENST00000252816 VTA1Q9NP79 307 aa26.67■■□□□ 1.86
LSM4-201ENST00000252816 GNEQ9Y223 722 aaKnown RBP26.67■■□□□ 1.86
LSM4-201ENST00000252816 CCDC69A6NI79 296 aa26.66■■□□□ 1.86
LSM4-201ENST00000252816 SMPD1P17405 629 aa26.66■■□□□ 1.86
LSM4-201ENST00000252816 SYN1P17600 705 aa26.66■■□□□ 1.86
LSM4-201ENST00000252816 EDNRBP24530 442 aa26.66■■□□□ 1.86
LSM4-201ENST00000252816 GJA9P57773 515 aa26.66■■□□□ 1.86
LSM4-201ENST00000252816 RTP1P59025 263 aa26.66■■□□□ 1.86
LSM4-201ENST00000252816 EXOSC10Q01780 885 aaKnown RBP26.66■■□□□ 1.86
LSM4-201ENST00000252816 MCF2L2Q86YR7 1114 aa26.66■■□□□ 1.86
LSM4-201ENST00000252816 DNERQ8NFT8 737 aa26.66■■□□□ 1.86
LSM4-201ENST00000252816 KCNB2Q92953 911 aa26.66■■□□□ 1.86
LSM4-201ENST00000252816 TCEANC2Q96MN5 208 aa26.66■■□□□ 1.86
LSM4-201ENST00000252816 TSEN34Q9BSV6 310 aaKnown RBP26.66■■□□□ 1.86
LSM4-201ENST00000252816 MAF1Q9H063 256 aa26.66■■□□□ 1.86
LSM4-201ENST00000252816 PCDHA1Q9Y5I3 950 aa26.66■■□□□ 1.86
LSM4-201ENST00000252816 A0A1W2PQ45 241 aaPredicted RBP26.65■■□□□ 1.86
LSM4-201ENST00000252816 A0A1W2PQY0 241 aa26.65■■□□□ 1.86
LSM4-201ENST00000252816 CTAGE5O15320 804 aa26.65■■□□□ 1.86
LSM4-201ENST00000252816 C6orf222P0C671 652 aaPredicted RBP26.65■■□□□ 1.86
LSM4-201ENST00000252816 RXRAP19793 462 aa26.65■■□□□ 1.86
LSM4-201ENST00000252816 CST5P28325 142 aaPredicted RBP26.65■■□□□ 1.86
LSM4-201ENST00000252816 SNX17Q15036 470 aa26.65■■□□□ 1.86
LSM4-201ENST00000252816 KCNA10Q16322 511 aa26.65■■□□□ 1.86
LSM4-201ENST00000252816 NOL8Q76FK4 1167 aaKnown RBP26.65■■□□□ 1.86
LSM4-201ENST00000252816 SGMS1Q86VZ5 419 aa26.65■■□□□ 1.86
LSM4-201ENST00000252816 RAB11FIP4Q86YS3 637 aa26.65■■□□□ 1.86
LSM4-201ENST00000252816 CTCFLQ8NI51 663 aaPredicted RBP26.65■■□□□ 1.86
LSM4-201ENST00000252816 TAAR1Q96RJ0 339 aa26.65■■□□□ 1.86
LSM4-201ENST00000252816 PRO3102Q9H379 93 aa26.65■■□□□ 1.86
LSM4-201ENST00000252816 KIF5BP33176 963 aa26.64■■□□□ 1.86
LSM4-201ENST00000252816 ACLYP53396 1101 aa26.64■■□□□ 1.86
LSM4-201ENST00000252816 HABP4Q5JVS0 413 aaKnown RBP26.64■■□□□ 1.86
LSM4-201ENST00000252816 IQSEC1Q6DN90 963 aa26.64■■□□□ 1.86
LSM4-201ENST00000252816 DHX32Q7L7V1 743 aaKnown RBP26.64■■□□□ 1.86
LSM4-201ENST00000252816 PIBF1Q8WXW3 757 aa26.64■■□□□ 1.86
LSM4-201ENST00000252816 PNMA6FA0A0J9YX94 578 aa26.63■■□□□ 1.85
LSM4-201ENST00000252816 PLEKHA8P1O95397 391 aa26.63■■□□□ 1.85
LSM4-201ENST00000252816 HSPA4P34932 840 aa26.63■■□□□ 1.85
LSM4-201ENST00000252816 NKX3-2P78367 333 aa26.63■■□□□ 1.85
LSM4-201ENST00000252816 PDE4DQ08499 809 aa26.63■■□□□ 1.85
LSM4-201ENST00000252816 KRT32Q14532 448 aa26.63■■□□□ 1.85
LSM4-201ENST00000252816 SPZ1Q9BXG8 430 aa26.63■■□□□ 1.85
LSM4-201ENST00000252816 SPC25Q9HBM1 224 aa26.63■■□□□ 1.85
LSM4-201ENST00000252816 RBM27Q9P2N5 1060 aaKnown RBP26.63■■□□□ 1.85
LSM4-201ENST00000252816 ATP11BQ9Y2G3 1177 aa26.63■■□□□ 1.85
LSM4-201ENST00000252816 SLC12A7Q9Y666 1083 aa26.63■■□□□ 1.85
LSM4-201ENST00000252816 CFBP00751 764 aa26.62■■□□□ 1.85
LSM4-201ENST00000252816 HSD17B4P51659 736 aa26.62■■□□□ 1.85
LSM4-201ENST00000252816 GHRHRQ02643 423 aa26.62■■□□□ 1.85
LSM4-201ENST00000252816 TRIM60Q495X7 471 aa26.62■■□□□ 1.85
LSM4-201ENST00000252816 TLK2Q86UE8 772 aa26.62■■□□□ 1.85
LSM4-201ENST00000252816 SRBD1Q8N5C6 995 aaKnown RBP26.62■■□□□ 1.85
LSM4-201ENST00000252816 TRIOBPQ9H2D6 2365 aa26.62■■□□□ 1.85
LSM4-201ENST00000252816 RBM47A0AV96 593 aaKnown RBP26.61■■□□□ 1.85
LSM4-201ENST00000252816 MOXD2PA6NHM9 499 aa26.61■■□□□ 1.85
LSM4-201ENST00000252816 REC8O95072 547 aa26.61■■□□□ 1.85
LSM4-201ENST00000252816 BEX3Q00994 111 aa26.61■■□□□ 1.85
LSM4-201ENST00000252816 GNASQ5JWF2 1037 aa26.61■■□□□ 1.85
LSM4-201ENST00000252816 C1orf53Q5VUE5 145 aa26.61■■□□□ 1.85
LSM4-201ENST00000252816 CMTR1Q8N1G2 835 aaKnown RBP26.61■■□□□ 1.85
LSM4-201ENST00000252816 RMDN3Q96TC7 470 aa26.61■■□□□ 1.85
LSM4-201ENST00000252816 SNX14Q9Y5W7 946 aa26.61■■□□□ 1.85
LSM4-201ENST00000252816 DYNC1LI2O43237 492 aaPredicted RBP26.6■■□□□ 1.85
LSM4-201ENST00000252816 ASGR1P07306 291 aa26.6■■□□□ 1.85
LSM4-201ENST00000252816 CALM1P0DP23 149 aa26.6■■□□□ 1.85
LSM4-201ENST00000252816 CALM2P0DP24 149 aa26.6■■□□□ 1.85
LSM4-201ENST00000252816 CALM3P0DP25 149 aa26.6■■□□□ 1.85
LSM4-201ENST00000252816 CPA1P15085 419 aa26.6■■□□□ 1.85
LSM4-201ENST00000252816 SMARCA1P28370 1054 aa26.6■■□□□ 1.85
LSM4-201ENST00000252816 GNAQP50148 359 aa26.6■■□□□ 1.85
LSM4-201ENST00000252816 MICU3Q86XE3 530 aa26.6■■□□□ 1.85
LSM4-201ENST00000252816 FANCBQ8NB91 859 aa26.6■■□□□ 1.85
LSM4-201ENST00000252816 PCSK9Q8NBP7 692 aaKnown RBP26.6■■□□□ 1.85
LSM4-201ENST00000252816 NSUN6Q8TEA1 469 aaKnown RBP26.6■■□□□ 1.85
LSM4-201ENST00000252816 MPHOSPH6Q99547 160 aaKnown RBP26.6■■□□□ 1.85
LSM4-201ENST00000252816 LZTS2Q9BRK4 669 aa26.6■■□□□ 1.85
LSM4-201ENST00000252816 WDR11Q9BZH6 1224 aa26.6■■□□□ 1.85
LSM4-201ENST00000252816 DUSP28Q4G0W2 176 aa26.59■■□□□ 1.85
LSM4-201ENST00000252816 GDF15Q99988 308 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms