RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 TM6SF1Q9BZW5 370 aa16.52■□□□□ 0.23
CNN1-201ENST00000252456 FAM217BQ9NTX9 383 aaPredicted RBP16.52■□□□□ 0.23
CNN1-201ENST00000252456 COL20A1Q9P218 1284 aa16.52■□□□□ 0.23
CNN1-201ENST00000252456 CNPY2Q9Y2B0 182 aa16.52■□□□□ 0.23
CNN1-201ENST00000252456 PCDHA1Q9Y5I3 950 aa16.52■□□□□ 0.23
CNN1-201ENST00000252456 ADCY6O43306 1168 aa16.51■□□□□ 0.23
CNN1-201ENST00000252456 CALML3P27482 149 aa16.51■□□□□ 0.23
CNN1-201ENST00000252456 ALDH5A1P51649 535 aaPredicted RBP16.51■□□□□ 0.23
CNN1-201ENST00000252456 APOBRQ0VD83 1088 aa16.51■□□□□ 0.23
CNN1-201ENST00000252456 FUT2Q10981 343 aa16.51■□□□□ 0.23
CNN1-201ENST00000252456 RUFY3Q7L099 469 aa16.51■□□□□ 0.23
CNN1-201ENST00000252456 BRF1Q92994 677 aa16.51■□□□□ 0.23
CNN1-201ENST00000252456 LENG1Q96BZ8 264 aaPredicted RBP16.51■□□□□ 0.23
CNN1-201ENST00000252456 ABHD16BQ9H3Z7 469 aa16.51■□□□□ 0.23
CNN1-201ENST00000252456 MRPL11Q9Y3B7 192 aaKnown RBP16.51■□□□□ 0.23
CNN1-201ENST00000252456 NID2Q14112 1375 aa16.5■□□□□ 0.23
CNN1-201ENST00000252456 ZBTB43O43298 467 aa16.5■□□□□ 0.23
CNN1-201ENST00000252456 GNAQP50148 359 aa16.5■□□□□ 0.23
CNN1-201ENST00000252456 RCAN1P53805 252 aa16.5■□□□□ 0.23
CNN1-201ENST00000252456 ACVR2BQ13705 512 aa16.5■□□□□ 0.23
CNN1-201ENST00000252456 SYTL5Q8TDW5 730 aaPredicted RBP16.5■□□□□ 0.23
CNN1-201ENST00000252456 PIBF1Q8WXW3 757 aa16.5■□□□□ 0.23
CNN1-201ENST00000252456 IL17RAQ96F46 866 aa16.5■□□□□ 0.23
CNN1-201ENST00000252456 PAWRQ96IZ0 340 aaKnown RBP16.5■□□□□ 0.23
CNN1-201ENST00000252456 UPF3BQ9BZI7 483 aaKnown RBP16.5■□□□□ 0.23
CNN1-201ENST00000252456 MAF1Q9H063 256 aa16.5■□□□□ 0.23
CNN1-201ENST00000252456 CNTNAP5Q8WYK1 1306 aa16.5■□□□□ 0.23
CNN1-201ENST00000252456 ASB14A6NK59 587 aa16.49■□□□□ 0.23
CNN1-201ENST00000252456 CDC27P30260 824 aa16.49■□□□□ 0.23
CNN1-201ENST00000252456 HSD17B4P51659 736 aa16.49■□□□□ 0.23
CNN1-201ENST00000252456 TOB2Q14106 344 aaPredicted RBP16.49■□□□□ 0.23
CNN1-201ENST00000252456 TSHZ2Q9NRE2 1034 aa16.49■□□□□ 0.23
CNN1-201ENST00000252456 ADD3Q9UEY8 706 aaKnown RBP16.49■□□□□ 0.23
CNN1-201ENST00000252456 ZHX1Q9UKY1 873 aaPredicted RBP16.49■□□□□ 0.23
CNN1-201ENST00000252456 COL6A1P12109 1028 aa16.48■□□□□ 0.23
CNN1-201ENST00000252456 AKR1A1P14550 325 aa16.48■□□□□ 0.23
CNN1-201ENST00000252456 EDNRBP24530 442 aa16.48■□□□□ 0.23
CNN1-201ENST00000252456 EVCP57679 992 aa16.48■□□□□ 0.23
CNN1-201ENST00000252456 FGD1P98174 961 aa16.48■□□□□ 0.23
CNN1-201ENST00000252456 RTN1Q16799 776 aa16.48■□□□□ 0.23
CNN1-201ENST00000252456 SYNE3Q6ZMZ3 975 aa16.48■□□□□ 0.23
CNN1-201ENST00000252456 CCDC82Q8N4S0 544 aa16.48■□□□□ 0.23
CNN1-201ENST00000252456 RRP36Q96EU6 259 aaKnown RBP16.48■□□□□ 0.23
CNN1-201ENST00000252456 LOC102724159A0A0B4J2E5 919 aa16.48■□□□□ 0.23
CNN1-201ENST00000252456 hCG_1642624A0A1W2PR95 340 aa16.48■□□□□ 0.23
CNN1-201ENST00000252456 GOLGA8AA7E2F4 631 aa16.48■□□□□ 0.23
CNN1-201ENST00000252456 GOLGA8BA8MQT2 603 aa16.48■□□□□ 0.23
CNN1-201ENST00000252456 ANAPC15P60006 121 aa16.48■□□□□ 0.23
CNN1-201ENST00000252456 PWP2Q15269 919 aaKnown RBP16.48■□□□□ 0.23
CNN1-201ENST00000252456 CCDC144BQ3MJ40 725 aa16.48■□□□□ 0.23
CNN1-201ENST00000252456 MCF2L2Q86YR7 1114 aa16.48■□□□□ 0.23
CNN1-201ENST00000252456 DNERQ8NFT8 737 aa16.48■□□□□ 0.23
CNN1-201ENST00000252456 TAAR1Q96RJ0 339 aa16.48■□□□□ 0.23
CNN1-201ENST00000252456 RBM28Q9NW13 759 aaKnown RBP16.48■□□□□ 0.23
CNN1-201ENST00000252456 CYP46A1Q9Y6A2 500 aa16.48■□□□□ 0.23
CNN1-201ENST00000252456 CEP290O15078 2479 aa16.48■□□□□ 0.23
CNN1-201ENST00000252456 KIAA1217Q5T5P2 1943 aa16.47■□□□□ 0.23
CNN1-201ENST00000252456 CFBP00751 764 aa16.47■□□□□ 0.23
CNN1-201ENST00000252456 TAPT1Q6NXT6 567 aa16.47■□□□□ 0.23
CNN1-201ENST00000252456 FBXO16Q8IX29 292 aaPredicted RBP16.47■□□□□ 0.23
CNN1-201ENST00000252456 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.46■□□□□ 0.23
CNN1-201ENST00000252456 ADAMTS4O75173 837 aa16.46■□□□□ 0.23
CNN1-201ENST00000252456 RARBP10826 455 aa16.46■□□□□ 0.23
CNN1-201ENST00000252456 HOXA13P31271 388 aaPredicted RBP16.46■□□□□ 0.23
CNN1-201ENST00000252456 ADD1P35611 737 aaKnown RBP16.46■□□□□ 0.23
CNN1-201ENST00000252456 TRAF1Q13077 416 aa16.46■□□□□ 0.23
CNN1-201ENST00000252456 TMEM63BQ5T3F8 832 aa16.46■□□□□ 0.23
CNN1-201ENST00000252456 EEPD1Q7L9B9 569 aa16.46■□□□□ 0.23
CNN1-201ENST00000252456 NECAB2Q7Z6G3 386 aa16.46■□□□□ 0.23
CNN1-201ENST00000252456 PDGFCQ9NRA1 345 aa16.46■□□□□ 0.23
CNN1-201ENST00000252456 FAM184BQ9ULE4 1060 aa16.46■□□□□ 0.23
CNN1-201ENST00000252456 DNM1LO00429 736 aa16.45■□□□□ 0.22
CNN1-201ENST00000252456 ADCYAP1R1P41586 468 aa16.45■□□□□ 0.22
CNN1-201ENST00000252456 METAP2P50579 478 aaKnown RBP eCLIP16.45■□□□□ 0.22
CNN1-201ENST00000252456 LRRC41Q15345 812 aa16.45■□□□□ 0.22
CNN1-201ENST00000252456 GJC2Q5T442 439 aaPredicted RBP16.45■□□□□ 0.22
CNN1-201ENST00000252456 VTA1Q9NP79 307 aa16.45■□□□□ 0.22
CNN1-201ENST00000252456 XPNPEP3Q9NQH7 507 aa16.45■□□□□ 0.22
CNN1-201ENST00000252456 MAP3K20Q9NYL2 800 aaKnown RBP16.45■□□□□ 0.22
CNN1-201ENST00000252456 SEC63Q9UGP8 760 aaKnown RBP16.45■□□□□ 0.22
CNN1-201ENST00000252456 SYNRGQ9UMZ2 1314 aa16.45■□□□□ 0.22
CNN1-201ENST00000252456 DUSP11O75319 330 aaKnown RBP16.45■□□□□ 0.22
CNN1-201ENST00000252456 PGK1P00558 417 aa16.45■□□□□ 0.22
CNN1-201ENST00000252456 PTGS1P23219 599 aa16.45■□□□□ 0.22
CNN1-201ENST00000252456 PDIA3P30101 505 aaKnown RBP16.45■□□□□ 0.22
CNN1-201ENST00000252456 IRX5P78411 483 aaPredicted RBP16.45■□□□□ 0.22
CNN1-201ENST00000252456 RMDN3Q96TC7 470 aa16.45■□□□□ 0.22
CNN1-201ENST00000252456 C11orf49Q9H6J7 331 aa16.45■□□□□ 0.22
CNN1-201ENST00000252456 NAP1L2Q9ULW6 460 aaPredicted RBP16.45■□□□□ 0.22
CNN1-201ENST00000252456 CTAGE5O15320 804 aa16.44■□□□□ 0.22
CNN1-201ENST00000252456 PPP2R5BQ15173 497 aa16.44■□□□□ 0.22
CNN1-201ENST00000252456 NTRK3Q16288 839 aa16.44■□□□□ 0.22
CNN1-201ENST00000252456 TYW1BQ6NUM6 668 aa16.44■□□□□ 0.22
CNN1-201ENST00000252456 SAMD3Q8N6K7 520 aa16.44■□□□□ 0.22
CNN1-201ENST00000252456 ARRDC4Q8NCT1 418 aa16.44■□□□□ 0.22
CNN1-201ENST00000252456 NSUN6Q8TEA1 469 aaKnown RBP16.44■□□□□ 0.22
CNN1-201ENST00000252456 GPKOWQ92917 476 aaPredicted RBP eCLIP16.44■□□□□ 0.22
CNN1-201ENST00000252456 LARP6Q9BRS8 491 aaKnown RBP16.44■□□□□ 0.22
CNN1-201ENST00000252456 PXMP2Q9NR77 195 aa16.44■□□□□ 0.22
CNN1-201ENST00000252456 GNEQ9Y223 722 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms