RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 PDE4DQ08499 809 aa24.34■■□□□ 1.49
CLN6-201ENST00000249806 STK4Q13043 487 aa24.34■■□□□ 1.49
CLN6-201ENST00000249806 GJA10Q969M2 543 aa24.34■■□□□ 1.49
CLN6-201ENST00000249806 MKL1Q969V6 931 aa24.34■■□□□ 1.49
CLN6-201ENST00000249806 C7orf25Q9BPX7 421 aa24.34■■□□□ 1.49
CLN6-201ENST00000249806 KANSL2Q9H9L4 492 aa24.34■■□□□ 1.49
CLN6-201ENST00000249806 GDF11O95390 407 aa24.33■■□□□ 1.49
CLN6-201ENST00000249806 MRPL12P52815 198 aaKnown RBP24.33■■□□□ 1.49
CLN6-201ENST00000249806 SYCP1Q15431 976 aa24.33■■□□□ 1.49
CLN6-201ENST00000249806 SLC15A2Q16348 729 aa24.33■■□□□ 1.49
CLN6-201ENST00000249806 TATDN1Q6P1N9 297 aa24.33■■□□□ 1.49
CLN6-201ENST00000249806 EEF2KMTQ96G04 330 aa24.33■■□□□ 1.49
CLN6-201ENST00000249806 SRRTQ9BXP5 876 aaKnown RBP24.33■■□□□ 1.49
CLN6-201ENST00000249806 TRIM34Q9BYJ4 488 aa24.33■■□□□ 1.49
CLN6-201ENST00000249806 MYH7BA7E2Y1 1941 aa24.33■■□□□ 1.49
CLN6-201ENST00000249806 PSMA7O14818 248 aa24.33■■□□□ 1.48
CLN6-201ENST00000249806 MFAP3LO75121 409 aa24.33■■□□□ 1.48
CLN6-201ENST00000249806 TUBB4AP04350 444 aa24.33■■□□□ 1.48
CLN6-201ENST00000249806 FCER1AP12319 257 aa24.33■■□□□ 1.48
CLN6-201ENST00000249806 STIM1Q13586 685 aa24.33■■□□□ 1.48
CLN6-201ENST00000249806 EZH2Q15910 746 aaKnown RBP24.33■■□□□ 1.48
CLN6-201ENST00000249806 SLFN13Q68D06 897 aa24.33■■□□□ 1.48
CLN6-201ENST00000249806 ANKRD20A12PQ8NF67 263 aa24.33■■□□□ 1.48
CLN6-201ENST00000249806 HPS3Q969F9 1004 aa24.33■■□□□ 1.48
CLN6-201ENST00000249806 PNMA5Q96PV4 448 aa24.33■■□□□ 1.48
CLN6-201ENST00000249806 NUDT12Q9BQG2 462 aa24.33■■□□□ 1.48
CLN6-201ENST00000249806 NYAP2Q9P242 653 aa24.33■■□□□ 1.48
CLN6-201ENST00000249806 RNF225M0QZC1 329 aaPredicted RBP24.32■■□□□ 1.48
CLN6-201ENST00000249806 QRICH1Q2TAL8 776 aa24.32■■□□□ 1.48
CLN6-201ENST00000249806 PRMT6Q96LA8 375 aaPredicted RBP24.32■■□□□ 1.48
CLN6-201ENST00000249806 L2HGDHQ9H9P8 463 aa24.32■■□□□ 1.48
CLN6-201ENST00000249806 BLOC1S4Q9NUP1 217 aa24.32■■□□□ 1.48
CLN6-201ENST00000249806 ITIH6Q6UXX5 1313 aa24.32■■□□□ 1.48
CLN6-201ENST00000249806 YDJCA8MPS7 323 aa24.31■■□□□ 1.48
CLN6-201ENST00000249806 USP17L15C9J2P7 530 aa24.31■■□□□ 1.48
CLN6-201ENST00000249806 USP17L13C9JLJ4 530 aa24.31■■□□□ 1.48
CLN6-201ENST00000249806 USP17L11C9JVI0 530 aa24.31■■□□□ 1.48
CLN6-201ENST00000249806 USP17L18D6R9N7 530 aa24.31■■□□□ 1.48
CLN6-201ENST00000249806 USP17L22D6RA61 530 aa24.31■■□□□ 1.48
CLN6-201ENST00000249806 USP17L17D6RBQ6 530 aa24.31■■□□□ 1.48
CLN6-201ENST00000249806 USP17L19D6RCP7 530 aa24.31■■□□□ 1.48
CLN6-201ENST00000249806 USP17L20D6RJB6 530 aa24.31■■□□□ 1.48
CLN6-201ENST00000249806 USP17L24Q0WX57 530 aa24.31■■□□□ 1.48
CLN6-201ENST00000249806 TMEM266Q2M3C6 531 aa24.31■■□□□ 1.48
CLN6-201ENST00000249806 TTI2Q6NXR4 508 aa24.31■■□□□ 1.48
CLN6-201ENST00000249806 USP17L6PQ6QN14 398 aa24.31■■□□□ 1.48
CLN6-201ENST00000249806 RAD9BQ6WBX8 426 aa24.31■■□□□ 1.48
CLN6-201ENST00000249806 PDCL2Q8N4E4 241 aa24.31■■□□□ 1.48
CLN6-201ENST00000249806 TRIM47Q96LD4 638 aa24.31■■□□□ 1.48
CLN6-201ENST00000249806 EXOC1Q9NV70 894 aa24.31■■□□□ 1.48
CLN6-201ENST00000249806 SLU7O95391 586 aaKnown RBP24.31■■□□□ 1.48
CLN6-201ENST00000249806 EN1Q05925 392 aaPredicted RBP24.31■■□□□ 1.48
CLN6-201ENST00000249806 MCM6Q14566 821 aa24.31■■□□□ 1.48
CLN6-201ENST00000249806 PPP4R3BQ5MIZ7 849 aa24.31■■□□□ 1.48
CLN6-201ENST00000249806 PPP4R3AQ6IN85 833 aa24.31■■□□□ 1.48
CLN6-201ENST00000249806 UIMC1Q96RL1 719 aa24.31■■□□□ 1.48
CLN6-201ENST00000249806 DDX25Q9UHL0 483 aaKnown RBP24.31■■□□□ 1.48
CLN6-201ENST00000249806 TNS1Q9HBL0 1735 aaKnown RBP24.31■■□□□ 1.48
CLN6-201ENST00000249806 C21orf2O43822 256 aa24.3■■□□□ 1.48
CLN6-201ENST00000249806 JAG1P78504 1218 aa24.3■■□□□ 1.48
CLN6-201ENST00000249806 AMPD3Q01432 767 aa24.3■■□□□ 1.48
CLN6-201ENST00000249806 UBXN1Q04323 297 aa24.3■■□□□ 1.48
CLN6-201ENST00000249806 ICA1Q05084 483 aa24.3■■□□□ 1.48
CLN6-201ENST00000249806 CCDC93Q567U6 631 aa24.3■■□□□ 1.48
CLN6-201ENST00000249806 PCDHA1Q9Y5I3 950 aa24.3■■□□□ 1.48
CLN6-201ENST00000249806 PHLPP2Q6ZVD8 1323 aa24.3■■□□□ 1.48
CLN6-201ENST00000249806 SNAP25P60880 206 aa24.3■■□□□ 1.48
CLN6-201ENST00000249806 SEMA3FQ13275 785 aa24.3■■□□□ 1.48
CLN6-201ENST00000249806 PDIA5Q14554 519 aa24.3■■□□□ 1.48
CLN6-201ENST00000249806 SV2BQ7L1I2 683 aa24.3■■□□□ 1.48
CLN6-201ENST00000249806 HAS1Q92839 578 aa24.3■■□□□ 1.48
CLN6-201ENST00000249806 NUP88Q99567 741 aaPredicted RBP24.3■■□□□ 1.48
CLN6-201ENST00000249806 DUSP9Q99956 384 aaKnown RBP24.3■■□□□ 1.48
CLN6-201ENST00000249806 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.3■■□□□ 1.482e-8■■■□□ 18
CLN6-201ENST00000249806 MYMKA6NI61 221 aa24.29■■□□□ 1.48
CLN6-201ENST00000249806 PPIP5K2O43314 1243 aa24.29■■□□□ 1.48
CLN6-201ENST00000249806 CNGA4Q8IV77 575 aa24.29■■□□□ 1.48
CLN6-201ENST00000249806 LRRN4CLQ8ND94 238 aa24.29■■□□□ 1.48
CLN6-201ENST00000249806 DCAF4Q8WV16 495 aa24.29■■□□□ 1.48
CLN6-201ENST00000249806 CCDC47Q96A33 483 aaKnown RBP24.29■■□□□ 1.48
CLN6-201ENST00000249806 DHTKD1Q96HY7 919 aaPredicted RBP24.29■■□□□ 1.48
CLN6-201ENST00000249806 F5H6K3 240 aa24.29■■□□□ 1.48
CLN6-201ENST00000249806 NPM3O75607 178 aaKnown RBP24.29■■□□□ 1.48
CLN6-201ENST00000249806 KLRC3Q07444 240 aa24.29■■□□□ 1.48
CLN6-201ENST00000249806 CDC37Q16543 378 aaPredicted RBP24.29■■□□□ 1.48
CLN6-201ENST00000249806 ABCB5Q2M3G0 1257 aa24.29■■□□□ 1.48
CLN6-201ENST00000249806 ANKRD40Q6AI12 368 aa24.29■■□□□ 1.48
CLN6-201ENST00000249806 TMEM179Q6ZVK1 233 aa24.29■■□□□ 1.48
CLN6-201ENST00000249806 SNX29Q8TEQ0 813 aa24.29■■□□□ 1.48
CLN6-201ENST00000249806 ERO1AQ96HE7 468 aa24.29■■□□□ 1.48
CLN6-201ENST00000249806 CDK5RAP3Q96JB5 506 aa24.29■■□□□ 1.48
CLN6-201ENST00000249806 PDGFDQ9GZP0 370 aaPredicted RBP24.29■■□□□ 1.48
CLN6-201ENST00000249806 THAP9Q9H5L6 903 aa24.29■■□□□ 1.48
CLN6-201ENST00000249806 ATF5Q9Y2D1 282 aaPredicted RBP24.29■■□□□ 1.48
CLN6-201ENST00000249806 DYMQ7RTS9 669 aa24.28■■□□□ 1.48
CLN6-201ENST00000249806 KCNK18Q7Z418 384 aa24.28■■□□□ 1.48
CLN6-201ENST00000249806 CSGALNACT2Q8N6G5 542 aa24.28■■□□□ 1.48
CLN6-201ENST00000249806 LARP4BQ92615 738 aaKnown RBP24.28■■□□□ 1.48
CLN6-201ENST00000249806 NAA15Q9BXJ9 866 aaKnown RBP24.28■■□□□ 1.48
CLN6-201ENST00000249806 RAB34Q9BZG1 259 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms