RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 FBXL16Q8N461 479 aa28.22■■■□□ 2.11
SDF2L1-201ENST00000248958 RRP36Q96EU6 259 aaKnown RBP28.22■■■□□ 2.11
SDF2L1-201ENST00000248958 TCEANC2Q96MN5 208 aa28.22■■■□□ 2.11
SDF2L1-201ENST00000248958 RBM28Q9NW13 759 aaKnown RBP28.22■■■□□ 2.11
SDF2L1-201ENST00000248958 BAZ2BQ9UIF8 2168 aaKnown RBP28.22■■■□□ 2.11
SDF2L1-201ENST00000248958 PCDHA1Q9Y5I3 950 aa28.22■■■□□ 2.11
SDF2L1-201ENST00000248958 PRPF38BQ5VTL8 546 aaKnown RBP28.21■■■□□ 2.11
SDF2L1-201ENST00000248958 MICU3Q86XE3 530 aa28.21■■■□□ 2.11
SDF2L1-201ENST00000248958 DIS3LQ8TF46 1054 aaKnown RBP28.21■■■□□ 2.11
SDF2L1-201ENST00000248958 ASTN1O14525 1302 aa28.2■■■□□ 2.11
SDF2L1-201ENST00000248958 ZBTB43O43298 467 aa28.2■■■□□ 2.1
SDF2L1-201ENST00000248958 RPS6KB1P23443 525 aa28.2■■■□□ 2.1
SDF2L1-201ENST00000248958 GHRHRQ02643 423 aa28.2■■■□□ 2.1
SDF2L1-201ENST00000248958 ANO1Q5XXA6 986 aa28.2■■■□□ 2.1
SDF2L1-201ENST00000248958 KATNBL1Q9H079 304 aa28.2■■■□□ 2.1
SDF2L1-201ENST00000248958 XPNPEP3Q9NQH7 507 aa28.2■■■□□ 2.1
SDF2L1-201ENST00000248958 SEC63Q9UGP8 760 aaKnown RBP28.2■■■□□ 2.1
SDF2L1-201ENST00000248958 LRRC37A2A6NM11 1700 aa28.2■■■□□ 2.1
SDF2L1-201ENST00000248958 PPP1R11O60927 126 aaPredicted RBP28.19■■■□□ 2.1
SDF2L1-201ENST00000248958 COL6A1P12109 1028 aa28.19■■■□□ 2.1
SDF2L1-201ENST00000248958 RXRAP19793 462 aa28.19■■■□□ 2.1
SDF2L1-201ENST00000248958 CASTP20810 708 aaKnown RBP28.19■■■□□ 2.1
SDF2L1-201ENST00000248958 PPP2R5BQ15173 497 aa28.19■■■□□ 2.1
SDF2L1-201ENST00000248958 Q6ZUG5 572 aa28.19■■■□□ 2.1
SDF2L1-201ENST00000248958 PURBQ96QR8 312 aaKnown RBP28.19■■■□□ 2.1
SDF2L1-201ENST00000248958 VTA1Q9NP79 307 aa28.19■■■□□ 2.1
SDF2L1-201ENST00000248958 KBTBD13C9JR72 458 aa28.18■■■□□ 2.1
SDF2L1-201ENST00000248958 DUSP11O75319 330 aaKnown RBP28.18■■■□□ 2.1
SDF2L1-201ENST00000248958 CCDC144BQ3MJ40 725 aa28.18■■■□□ 2.1
SDF2L1-201ENST00000248958 RNF180Q86T96 592 aa28.18■■■□□ 2.1
SDF2L1-201ENST00000248958 SRBD1Q8N5C6 995 aaKnown RBP28.18■■■□□ 2.1
SDF2L1-201ENST00000248958 DPF3Q92784 378 aa28.18■■■□□ 2.1
SDF2L1-201ENST00000248958 TM6SF1Q9BZW5 370 aa28.18■■■□□ 2.1
SDF2L1-201ENST00000248958 KLF18A0A0U1RQI7 1052 aa28.17■■■□□ 2.1
SDF2L1-201ENST00000248958 PLEKHA8P1O95397 391 aa28.17■■■□□ 2.1
SDF2L1-201ENST00000248958 TMTC3Q6ZXV5 915 aa28.17■■■□□ 2.1
SDF2L1-201ENST00000248958 RUFY3Q7L099 469 aa28.17■■■□□ 2.1
SDF2L1-201ENST00000248958 SYTL5Q8TDW5 730 aaPredicted RBP28.17■■■□□ 2.1
SDF2L1-201ENST00000248958 AGXT2Q9BYV1 514 aa28.17■■■□□ 2.1
SDF2L1-201ENST00000248958 ZSWIM6Q9HCJ5 1215 aa28.17■■■□□ 2.1
SDF2L1-201ENST00000248958 BRPF3Q9ULD4 1205 aa28.17■■■□□ 2.1
SDF2L1-201ENST00000248958 CFBP00751 764 aa28.16■■■□□ 2.1
SDF2L1-201ENST00000248958 CPA1P15085 419 aa28.16■■■□□ 2.1
SDF2L1-201ENST00000248958 HSD17B4P51659 736 aa28.16■■■□□ 2.1
SDF2L1-201ENST00000248958 LRRC41Q15345 812 aa28.16■■■□□ 2.1
SDF2L1-201ENST00000248958 RTN1Q16799 776 aa28.16■■■□□ 2.1
SDF2L1-201ENST00000248958 GJC2Q5T442 439 aaPredicted RBP28.16■■■□□ 2.1
SDF2L1-201ENST00000248958 IQSEC1Q6DN90 963 aa28.16■■■□□ 2.1
SDF2L1-201ENST00000248958 RAB11FIP4Q86YS3 637 aa28.16■■■□□ 2.1
SDF2L1-201ENST00000248958 NSUN6Q8TEA1 469 aaKnown RBP28.16■■■□□ 2.1
SDF2L1-201ENST00000248958 TBC1D5Q92609 795 aa28.16■■■□□ 2.1
SDF2L1-201ENST00000248958 SPC25Q9HBM1 224 aa28.16■■■□□ 2.1
SDF2L1-201ENST00000248958 EDNRBP24530 442 aa28.15■■■□□ 2.1
SDF2L1-201ENST00000248958 PDE4DQ08499 809 aa28.15■■■□□ 2.1
SDF2L1-201ENST00000248958 BRF1Q92994 677 aa28.15■■■□□ 2.1
SDF2L1-201ENST00000248958 IWS1Q96ST2 819 aa28.15■■■□□ 2.1
SDF2L1-201ENST00000248958 CYP46A1Q9Y6A2 500 aa28.15■■■□□ 2.1
SDF2L1-201ENST00000248958 CCDC196A0A1B0GTZ2 297 aa28.14■■■□□ 2.1
SDF2L1-201ENST00000248958 GOLGA8AA7E2F4 631 aa28.14■■■□□ 2.1
SDF2L1-201ENST00000248958 GOLGA8BA8MQT2 603 aa28.14■■■□□ 2.1
SDF2L1-201ENST00000248958 OPLAHO14841 1288 aa28.14■■■□□ 2.1
SDF2L1-201ENST00000248958 TNFAIP2Q03169 654 aa28.14■■■□□ 2.1
SDF2L1-201ENST00000248958 PIBF1Q8WXW3 757 aa28.14■■■□□ 2.1
SDF2L1-201ENST00000248958 TAAR1Q96RJ0 339 aa28.14■■■□□ 2.1
SDF2L1-201ENST00000248958 GCOM1H8Y6P7 765 aaPredicted RBP28.13■■■□□ 2.09
SDF2L1-201ENST00000248958 ADAMTS4O75173 837 aa28.13■■■□□ 2.09
SDF2L1-201ENST00000248958 PGK1P00558 417 aa28.13■■■□□ 2.09
SDF2L1-201ENST00000248958 POLR2MP0CAP2 368 aa28.13■■■□□ 2.09
SDF2L1-201ENST00000248958 ANAPC15P60006 121 aa28.13■■■□□ 2.09
SDF2L1-201ENST00000248958 TAPT1Q6NXT6 567 aa28.13■■■□□ 2.09
SDF2L1-201ENST00000248958 FBXO16Q8IX29 292 aaPredicted RBP28.13■■■□□ 2.09
SDF2L1-201ENST00000248958 RMDN3Q96TC7 470 aa28.13■■■□□ 2.09
SDF2L1-201ENST00000248958 TSEN34Q9BSV6 310 aaKnown RBP28.13■■■□□ 2.09
SDF2L1-201ENST00000248958 SENP6Q9GZR1 1112 aaPredicted RBP28.13■■■□□ 2.09
SDF2L1-201ENST00000248958 NR2E3Q9Y5X4 410 aa28.13■■■□□ 2.09
SDF2L1-201ENST00000248958 SYNRGQ9UMZ2 1314 aa28.13■■■□□ 2.09
SDF2L1-201ENST00000248958 ALPK3Q96L96 1907 aa28.12■■■□□ 2.09
SDF2L1-201ENST00000248958 EVI5O60447 810 aa28.12■■■□□ 2.09
SDF2L1-201ENST00000248958 MYCNP04198 464 aaPredicted RBP28.12■■■□□ 2.09
SDF2L1-201ENST00000248958 METAP2P50579 478 aaKnown RBP eCLIP28.12■■■□□ 2.09
SDF2L1-201ENST00000248958 APOBRQ0VD83 1088 aa28.12■■■□□ 2.09
SDF2L1-201ENST00000248958 ARHGEF16Q5VV41 709 aa28.12■■■□□ 2.09
SDF2L1-201ENST00000248958 EEPD1Q7L9B9 569 aa28.12■■■□□ 2.09
SDF2L1-201ENST00000248958 CMTR1Q8N1G2 835 aaKnown RBP28.12■■■□□ 2.09
SDF2L1-201ENST00000248958 UPF3AQ9H1J1 476 aaKnown RBP28.12■■■□□ 2.09
SDF2L1-201ENST00000248958 NAP1L2Q9ULW6 460 aaPredicted RBP28.12■■■□□ 2.09
SDF2L1-201ENST00000248958 Q9Y3F1 56 aa28.12■■■□□ 2.09
SDF2L1-201ENST00000248958 RBM47A0AV96 593 aaKnown RBP28.11■■■□□ 2.09
SDF2L1-201ENST00000248958 CST5P28325 142 aaPredicted RBP28.11■■■□□ 2.09
SDF2L1-201ENST00000248958 ADCYAP1R1P41586 468 aa28.11■■■□□ 2.09
SDF2L1-201ENST00000248958 GJA9P57773 515 aa28.11■■■□□ 2.09
SDF2L1-201ENST00000248958 COL20A1Q9P218 1284 aa28.11■■■□□ 2.09
SDF2L1-201ENST00000248958 NID2Q14112 1375 aa28.11■■■□□ 2.09
SDF2L1-201ENST00000248958 EVCP57679 992 aa28.1■■■□□ 2.09
SDF2L1-201ENST00000248958 NKX3-2P78367 333 aa28.1■■■□□ 2.09
SDF2L1-201ENST00000248958 NOL8Q76FK4 1167 aaKnown RBP28.1■■■□□ 2.09
SDF2L1-201ENST00000248958 CCDC82Q8N4S0 544 aa28.1■■■□□ 2.09
SDF2L1-201ENST00000248958 PCSK9Q8NBP7 692 aaKnown RBP28.1■■■□□ 2.09
SDF2L1-201ENST00000248958 KLHDC9Q8NEP7 349 aa28.1■■■□□ 2.09
SDF2L1-201ENST00000248958 LENG1Q96BZ8 264 aaPredicted RBP28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms