RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 LAD1O00515 517 aa17.68■□□□□ 0.42
LRFN1-201ENST00000248668 PRPHP41219 470 aa17.68■□□□□ 0.42
LRFN1-201ENST00000248668 USP17L24Q0WX57 530 aa17.68■□□□□ 0.42
LRFN1-201ENST00000248668 USP17L6PQ6QN14 398 aa17.68■□□□□ 0.42
LRFN1-201ENST00000248668 GPIHBP1Q8IV16 184 aa17.68■□□□□ 0.42
LRFN1-201ENST00000248668 NKRFO15226 690 aaKnown RBP eCLIP17.68■□□□□ 0.42
LRFN1-201ENST00000248668 EDIL3O43854 480 aa17.68■□□□□ 0.42
LRFN1-201ENST00000248668 ECE2O60344 883 aa17.68■□□□□ 0.42
LRFN1-201ENST00000248668 CT47A1Q5JQC4 288 aaPredicted RBP17.68■□□□□ 0.42
LRFN1-201ENST00000248668 CDK5RAP3Q96JB5 506 aa17.68■□□□□ 0.42
LRFN1-201ENST00000248668 CARD6Q9BX69 1037 aa17.68■□□□□ 0.42
LRFN1-201ENST00000248668 TRIM34Q9BYJ4 488 aa17.68■□□□□ 0.42
LRFN1-201ENST00000248668 PSMA7O14818 248 aa17.67■□□□□ 0.42
LRFN1-201ENST00000248668 IDEP14735 1019 aa17.67■□□□□ 0.42
LRFN1-201ENST00000248668 EPC1Q9H2F5 836 aa17.67■□□□□ 0.42
LRFN1-201ENST00000248668 LIMA1Q9UHB6 759 aaKnown RBP17.67■□□□□ 0.42
LRFN1-201ENST00000248668 EEF2P13639 858 aaKnown RBP17.67■□□□□ 0.42
LRFN1-201ENST00000248668 IKQ13123 557 aaPredicted RBP17.67■□□□□ 0.42
LRFN1-201ENST00000248668 STIM1Q13586 685 aa17.67■□□□□ 0.42
LRFN1-201ENST00000248668 SEPT2Q15019 361 aa17.67■□□□□ 0.42
LRFN1-201ENST00000248668 CALML4Q96GE6 196 aa17.67■□□□□ 0.42
LRFN1-201ENST00000248668 ABL1P00519 1130 aa17.66■□□□□ 0.42
LRFN1-201ENST00000248668 CASQ1P31415 396 aa17.66■□□□□ 0.42
LRFN1-201ENST00000248668 NOVP48745 357 aa17.66■□□□□ 0.42
LRFN1-201ENST00000248668 CSGALNACT2Q8N6G5 542 aa17.66■□□□□ 0.42
LRFN1-201ENST00000248668 TDRD3Q9H7E2 651 aaKnown RBP17.66■□□□□ 0.42
LRFN1-201ENST00000248668 ZSWIM4Q9H7M6 989 aa17.66■□□□□ 0.42
LRFN1-201ENST00000248668 L2HGDHQ9H9P8 463 aa17.66■□□□□ 0.42
LRFN1-201ENST00000248668 PNMA6FA0A0J9YX94 578 aa17.66■□□□□ 0.42
LRFN1-201ENST00000248668 SSBP05455 408 aaKnown RBP eCLIP17.66■□□□□ 0.42
LRFN1-201ENST00000248668 TPM1P09493 284 aa17.66■□□□□ 0.42
LRFN1-201ENST00000248668 KRT9P35527 623 aa17.66■□□□□ 0.42
LRFN1-201ENST00000248668 SLC1A4P43007 532 aa17.66■□□□□ 0.42
LRFN1-201ENST00000248668 FBXO38Q6PIJ6 1188 aa17.66■□□□□ 0.42
LRFN1-201ENST00000248668 HHIPL2Q6UWX4 724 aa17.66■□□□□ 0.42
LRFN1-201ENST00000248668 MNS1Q8NEH6 495 aa17.66■□□□□ 0.42
LRFN1-201ENST00000248668 PANX2Q96RD6 677 aa17.66■□□□□ 0.42
LRFN1-201ENST00000248668 SWAP70Q9UH65 585 aa17.66■□□□□ 0.42
LRFN1-201ENST00000248668 SUGT1Q9Y2Z0 365 aa17.66■□□□□ 0.42
LRFN1-201ENST00000248668 B4DLN1 442 aa17.66■□□□□ 0.42
LRFN1-201ENST00000248668 H0YIN7 160 aa17.66■□□□□ 0.42
LRFN1-201ENST00000248668 RHOBTB3O94955 611 aa17.66■□□□□ 0.42
LRFN1-201ENST00000248668 CCDC175P0C221 793 aa17.66■□□□□ 0.42
LRFN1-201ENST00000248668 SNHG28P0DPA3 235 aa17.66■□□□□ 0.42
LRFN1-201ENST00000248668 CERKLQ49MI3 558 aaPredicted RBP17.66■□□□□ 0.42
LRFN1-201ENST00000248668 SAMD1Q6SPF0 538 aaPredicted RBP17.66■□□□□ 0.42
LRFN1-201ENST00000248668 GIMAP8Q8ND71 665 aaPredicted RBP17.66■□□□□ 0.42
LRFN1-201ENST00000248668 SNX29Q8TEQ0 813 aa17.66■□□□□ 0.42
LRFN1-201ENST00000248668 SECISBP2LQ93073 1101 aaKnown RBP17.66■□□□□ 0.42
LRFN1-201ENST00000248668 FAM198AQ9UFP1 575 aa17.66■□□□□ 0.42
LRFN1-201ENST00000248668 KLK7P49862 253 aa17.65■□□□□ 0.42
LRFN1-201ENST00000248668 GRB10Q13322 594 aa17.65■□□□□ 0.42
LRFN1-201ENST00000248668 SH3BP5LQ7L8J4 393 aa17.65■□□□□ 0.42
LRFN1-201ENST00000248668 FCHSD1Q86WN1 690 aa17.65■□□□□ 0.42
LRFN1-201ENST00000248668 AK8Q96MA6 479 aa17.65■□□□□ 0.42
LRFN1-201ENST00000248668 ERVK-24P63145 666 aa17.65■□□□□ 0.42
LRFN1-201ENST00000248668 SPAG1Q07617 926 aa17.65■□□□□ 0.42
LRFN1-201ENST00000248668 CCDC93Q567U6 631 aa17.65■□□□□ 0.42
LRFN1-201ENST00000248668 ANKRD40Q6AI12 368 aa17.65■□□□□ 0.42
LRFN1-201ENST00000248668 KCNK18Q7Z418 384 aa17.65■□□□□ 0.42
LRFN1-201ENST00000248668 PSTPIP2Q9H939 334 aa17.65■□□□□ 0.42
LRFN1-201ENST00000248668 ADGRG1Q9Y653 693 aa17.65■□□□□ 0.42
LRFN1-201ENST00000248668 PHLPP2Q6ZVD8 1323 aa17.65■□□□□ 0.42
LRFN1-201ENST00000248668 H7C1D1 291 aa17.65■□□□□ 0.42
LRFN1-201ENST00000248668 PODNQ7Z5L7 613 aa17.65■□□□□ 0.42
LRFN1-201ENST00000248668 MAGEC2Q9UBF1 373 aaPredicted RBP17.65■□□□□ 0.42
LRFN1-201ENST00000248668 MYMKA6NI61 221 aa17.64■□□□□ 0.41
LRFN1-201ENST00000248668 USH1GQ495M9 461 aa17.64■□□□□ 0.41
LRFN1-201ENST00000248668 CNGA4Q8IV77 575 aa17.64■□□□□ 0.41
LRFN1-201ENST00000248668 SPICE1Q8N0Z3 855 aa17.64■□□□□ 0.41
LRFN1-201ENST00000248668 PCMTD1Q96MG8 357 aaPredicted RBP17.64■□□□□ 0.41
LRFN1-201ENST00000248668 MTMR9Q96QG7 549 aa17.64■□□□□ 0.41
LRFN1-201ENST00000248668 LTBP1Q14766 1721 aa17.64■□□□□ 0.41
LRFN1-201ENST00000248668 PLIN4Q96Q06 1357 aa17.64■□□□□ 0.41
LRFN1-201ENST00000248668 ESYT2A0FGR8 921 aa17.64■□□□□ 0.41
LRFN1-201ENST00000248668 ZBTB5O15062 677 aa17.64■□□□□ 0.41
LRFN1-201ENST00000248668 SMARCA1P28370 1054 aa17.64■□□□□ 0.41
LRFN1-201ENST00000248668 RAD51AP2Q09MP3 1159 aa17.64■□□□□ 0.41
LRFN1-201ENST00000248668 KCNB1Q14721 858 aa17.64■□□□□ 0.41
LRFN1-201ENST00000248668 LRRC41Q15345 812 aa17.64■□□□□ 0.41
LRFN1-201ENST00000248668 TMEM266Q2M3C6 531 aa17.64■□□□□ 0.41
LRFN1-201ENST00000248668 QRICH1Q2TAL8 776 aa17.64■□□□□ 0.41
LRFN1-201ENST00000248668 ARHGAP29Q52LW3 1261 aa17.64■□□□□ 0.41
LRFN1-201ENST00000248668 TTI2Q6NXR4 508 aa17.64■□□□□ 0.41
LRFN1-201ENST00000248668 PNMA5Q96PV4 448 aa17.64■□□□□ 0.41
LRFN1-201ENST00000248668 CHP1Q99653 195 aa17.64■□□□□ 0.41
LRFN1-201ENST00000248668 DUSP9Q99956 384 aaKnown RBP17.64■□□□□ 0.41
LRFN1-201ENST00000248668 SLF1Q9BQI6 1058 aa17.64■□□□□ 0.41
LRFN1-201ENST00000248668 ABHD10Q9NUJ1 306 aa17.64■□□□□ 0.41
LRFN1-201ENST00000248668 DDX25Q9UHL0 483 aaKnown RBP17.64■□□□□ 0.41
LRFN1-201ENST00000248668 DACT2Q5SW24 774 aa17.63■□□□□ 0.41
LRFN1-201ENST00000248668 SLFN13Q68D06 897 aa17.63■□□□□ 0.41
LRFN1-201ENST00000248668 SV2BQ7L1I2 683 aa17.63■□□□□ 0.41
LRFN1-201ENST00000248668 GLIS3Q8NEA6 775 aa17.63■□□□□ 0.41
LRFN1-201ENST00000248668 CUL5Q93034 780 aa17.63■□□□□ 0.41
LRFN1-201ENST00000248668 BLOC1S4Q9NUP1 217 aa17.63■□□□□ 0.41
LRFN1-201ENST00000248668 TFR2Q9UP52 801 aa17.63■□□□□ 0.41
LRFN1-201ENST00000248668 MYH8P13535 1937 aa17.63■□□□□ 0.41
LRFN1-201ENST00000248668 TTC26A0AVF1 554 aa17.63■□□□□ 0.41
LRFN1-201ENST00000248668 ECM1Q16610 540 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms