RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 TRAF5O00463 557 aa14.05□□□□□ -0.16
RAB3IP-201ENST00000247833 DPP8Q6V1X1 898 aaPredicted RBP14.05□□□□□ -0.16
RAB3IP-201ENST00000247833 DISP2A7MBM2 1401 aa14.05□□□□□ -0.16
RAB3IP-201ENST00000247833 ZNF185O15231 689 aa14.05□□□□□ -0.16
RAB3IP-201ENST00000247833 TDP2O95551 362 aa14.05□□□□□ -0.16
RAB3IP-201ENST00000247833 RNASE9P60153 205 aaKnown RBP14.05□□□□□ -0.16
RAB3IP-201ENST00000247833 EHBP1Q8NDI1 1231 aa14.05□□□□□ -0.16
RAB3IP-201ENST00000247833 SECISBP2LQ93073 1101 aaKnown RBP14.05□□□□□ -0.16
RAB3IP-201ENST00000247833 TSG101Q99816 390 aa14.05□□□□□ -0.16
RAB3IP-201ENST00000247833 KANSL2Q9H9L4 492 aa14.05□□□□□ -0.16
RAB3IP-201ENST00000247833 SH3GLB2Q9NR46 395 aa14.05□□□□□ -0.16
RAB3IP-201ENST00000247833 SPATA31A5Q5VU36 1347 aa14.05□□□□□ -0.16
RAB3IP-201ENST00000247833 SPATA31A7Q8IWB4 1347 aa14.05□□□□□ -0.16
RAB3IP-201ENST00000247833 H3BQF6 201 aa14.05□□□□□ -0.16
RAB3IP-201ENST00000247833 SCNN1DP51172 638 aa14.05□□□□□ -0.16
RAB3IP-201ENST00000247833 CASP8Q14790 479 aa14.05□□□□□ -0.16
RAB3IP-201ENST00000247833 IRF2BP1Q8IU81 584 aa14.05□□□□□ -0.16
RAB3IP-201ENST00000247833 IFIH1Q9BYX4 1025 aaKnown RBP14.05□□□□□ -0.16
RAB3IP-201ENST00000247833 THAP9Q9H5L6 903 aa14.05□□□□□ -0.16
RAB3IP-201ENST00000247833 ADCY7P51828 1080 aa14.04□□□□□ -0.16
RAB3IP-201ENST00000247833 GRAPQ13588 217 aa14.04□□□□□ -0.16
RAB3IP-201ENST00000247833 GRAPLQ8TC17 118 aaPredicted RBP14.04□□□□□ -0.16
RAB3IP-201ENST00000247833 DHTKD1Q96HY7 919 aaPredicted RBP14.04□□□□□ -0.16
RAB3IP-201ENST00000247833 RABEP2Q9H5N1 569 aa14.04□□□□□ -0.16
RAB3IP-201ENST00000247833 TAF1P21675 1872 aa14.04□□□□□ -0.16
RAB3IP-201ENST00000247833 ATP8B1O43520 1251 aa14.04□□□□□ -0.16
RAB3IP-201ENST00000247833 TACC1O75410 805 aa14.04□□□□□ -0.16
RAB3IP-201ENST00000247833 PLEKP08567 350 aaPredicted RBP14.04□□□□□ -0.16
RAB3IP-201ENST00000247833 CYP2C19P33261 490 aa14.04□□□□□ -0.16
RAB3IP-201ENST00000247833 ZSCAN26Q16670 478 aa14.04□□□□□ -0.16
RAB3IP-201ENST00000247833 MMS19Q96T76 1030 aa14.04□□□□□ -0.16
RAB3IP-201ENST00000247833 LACRTQ9GZZ8 138 aa14.04□□□□□ -0.16
RAB3IP-201ENST00000247833 MYH6P13533 1939 aa14.04□□□□□ -0.16
RAB3IP-201ENST00000247833 FGRP09769 529 aa14.04□□□□□ -0.16
RAB3IP-201ENST00000247833 ARHGAP25P42331 645 aa14.04□□□□□ -0.16
RAB3IP-201ENST00000247833 MAP9Q49MG5 647 aa14.04□□□□□ -0.16
RAB3IP-201ENST00000247833 GIMAP8Q8ND71 665 aaPredicted RBP14.04□□□□□ -0.16
RAB3IP-201ENST00000247833 CD209Q9NNX6 404 aa14.04□□□□□ -0.16
RAB3IP-201ENST00000247833 CWC15Q9P013 229 aaKnown RBP14.04□□□□□ -0.16
RAB3IP-201ENST00000247833 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.04□□□□□ -0.16
RAB3IP-201ENST00000247833 LEMD3Q9Y2U8 911 aa14.04□□□□□ -0.16
RAB3IP-201ENST00000247833 ITGB4P16144 1822 aa14.04□□□□□ -0.16
RAB3IP-201ENST00000247833 BUB1O43683 1085 aa14.03□□□□□ -0.16
RAB3IP-201ENST00000247833 RHOBTB3O94955 611 aa14.03□□□□□ -0.16
RAB3IP-201ENST00000247833 GPSM2P81274 684 aa14.03□□□□□ -0.16
RAB3IP-201ENST00000247833 C2orf54Q08AI8 447 aa14.03□□□□□ -0.16
RAB3IP-201ENST00000247833 TUBB2AQ13885 445 aa14.03□□□□□ -0.16
RAB3IP-201ENST00000247833 DNAJC21Q5F1R6 531 aaKnown RBP14.03□□□□□ -0.16
RAB3IP-201ENST00000247833 MEX3CQ5U5Q3 659 aaKnown RBP14.03□□□□□ -0.16
RAB3IP-201ENST00000247833 C4orf32Q8N8J7 132 aa14.03□□□□□ -0.16
RAB3IP-201ENST00000247833 LARP4BQ92615 738 aaKnown RBP14.03□□□□□ -0.16
RAB3IP-201ENST00000247833 RUFY1Q96T51 708 aa14.03□□□□□ -0.16
RAB3IP-201ENST00000247833 LZTS2Q9BRK4 669 aa14.03□□□□□ -0.16
RAB3IP-201ENST00000247833 TUBB2BQ9BVA1 445 aa14.03□□□□□ -0.16
RAB3IP-201ENST00000247833 CCSER1Q9C0I3 900 aa14.03□□□□□ -0.16
RAB3IP-201ENST00000247833 CKAP4Q07065 602 aaKnown RBP14.03□□□□□ -0.16
RAB3IP-201ENST00000247833 PTPROQ16827 1216 aa14.03□□□□□ -0.16
RAB3IP-201ENST00000247833 GALNT17Q6IS24 598 aa14.03□□□□□ -0.16
RAB3IP-201ENST00000247833 NUP58Q9BVL2 599 aa14.03□□□□□ -0.16
RAB3IP-201ENST00000247833 TMX4Q9H1E5 349 aaPredicted RBP14.03□□□□□ -0.16
RAB3IP-201ENST00000247833 SLC10A5Q5PT55 438 aa14.03□□□□□ -0.16
RAB3IP-201ENST00000247833 TTI2Q6NXR4 508 aa14.03□□□□□ -0.16
RAB3IP-201ENST00000247833 KCTD1Q719H9 257 aa14.03□□□□□ -0.16
RAB3IP-201ENST00000247833 NOC3LQ8WTT2 800 aaKnown RBP14.03□□□□□ -0.16
RAB3IP-201ENST00000247833 MLXIPQ9HAP2 919 aa14.03□□□□□ -0.16
RAB3IP-201ENST00000247833 MYO1AQ9UBC5 1043 aa14.03□□□□□ -0.16
RAB3IP-201ENST00000247833 CAPN11Q9UMQ6 739 aa14.03□□□□□ -0.16
RAB3IP-201ENST00000247833 PLCG2P16885 1265 aa14.02□□□□□ -0.16
RAB3IP-201ENST00000247833 MAGEA1P43355 309 aa14.02□□□□□ -0.16
RAB3IP-201ENST00000247833 ZBED6P86452 979 aa14.02□□□□□ -0.16
RAB3IP-201ENST00000247833 PPARDQ03181 441 aa14.02□□□□□ -0.16
RAB3IP-201ENST00000247833 TCP10Q12799 353 aa14.02□□□□□ -0.16
RAB3IP-201ENST00000247833 SLC35G1Q2M3R5 365 aa14.02□□□□□ -0.16
RAB3IP-201ENST00000247833 KBTBD4Q9NVX7 518 aa14.02□□□□□ -0.16
RAB3IP-201ENST00000247833 LRRC10BA6NIK2 292 aa14.02□□□□□ -0.17
RAB3IP-201ENST00000247833 MOCS3O95396 460 aa14.02□□□□□ -0.17
RAB3IP-201ENST00000247833 BEND6Q5SZJ8 279 aaPredicted RBP14.02□□□□□ -0.17
RAB3IP-201ENST00000247833 TCERG1LQ5VWI1 586 aa14.02□□□□□ -0.17
RAB3IP-201ENST00000247833 AMIGO3Q86WK7 504 aa14.02□□□□□ -0.17
RAB3IP-201ENST00000247833 SLF2Q8IX21 1173 aa14.02□□□□□ -0.17
RAB3IP-201ENST00000247833 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.02□□□□□ -0.17
RAB3IP-201ENST00000247833 PALM3A6NDB9 673 aaPredicted RBP14.02□□□□□ -0.17
RAB3IP-201ENST00000247833 LAD1O00515 517 aa14.02□□□□□ -0.17
RAB3IP-201ENST00000247833 FGFR1OPO95684 399 aaKnown RBP14.02□□□□□ -0.17
RAB3IP-201ENST00000247833 HERVK_113P62684 666 aa14.02□□□□□ -0.17
RAB3IP-201ENST00000247833 KCNB1Q14721 858 aa14.02□□□□□ -0.17
RAB3IP-201ENST00000247833 CCDC155Q8N6L0 562 aa14.02□□□□□ -0.17
RAB3IP-201ENST00000247833 AK8Q96MA6 479 aa14.02□□□□□ -0.17
RAB3IP-201ENST00000247833 ALS2CR12Q96Q35 445 aa14.02□□□□□ -0.17
RAB3IP-201ENST00000247833 POLD4Q9HCU8 107 aa14.02□□□□□ -0.17
RAB3IP-201ENST00000247833 REXO2Q9Y3B8 237 aaKnown RBP14.02□□□□□ -0.17
RAB3IP-201ENST00000247833 KDM4FA0A1W2PPD8 638 aa14.01□□□□□ -0.17
RAB3IP-201ENST00000247833 FAM196BA6NMK8 535 aa14.01□□□□□ -0.17
RAB3IP-201ENST00000247833 KLRC4O43908 158 aa14.01□□□□□ -0.17
RAB3IP-201ENST00000247833 EIF4A3P38919 411 aaKnown RBP14.01□□□□□ -0.17
RAB3IP-201ENST00000247833 DOK7Q18PE1 504 aa14.01□□□□□ -0.17
RAB3IP-201ENST00000247833 IQCEQ6IPM2 695 aa14.01□□□□□ -0.17
RAB3IP-201ENST00000247833 NDST4Q9H3R1 872 aa14.01□□□□□ -0.17
RAB3IP-201ENST00000247833 SMARCAL1Q9NZC9 954 aa14.01□□□□□ -0.17
RAB3IP-201ENST00000247833 RSPH14Q9UHP6 348 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms