RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 ZDHHC9Q9Y397 364 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 TEX14Q8IWB6 1497 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 LRRD1A4D1F6 860 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 DNAJC6O75061 913 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 SLC4A1P02730 911 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 SCNN1DP51172 638 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 MS4A14Q96JA4 679 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 NHEJ1Q9H9Q4 299 aaPredicted RBP8.22□□□□□ -1.09
RIF1-201ENST00000243326 MYO1FO00160 1098 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 GNPTABQ3T906 1256 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 MYOCDQ8IZQ8 938 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 TSPYL2Q9H2G4 693 aaPredicted RBP8.22□□□□□ -1.09
RIF1-201ENST00000243326 GOLGA8IPA6NC78 632 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 GOLGA8JA6NMD2 632 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 IL17REQ8NFR9 667 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 ZNF711Q9Y462 761 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 MAD1L1Q9Y6D9 718 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 STX10O60499 249 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 TOM1L1O75674 476 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 NCF2P19878 526 aaPredicted RBP8.22□□□□□ -1.09
RIF1-201ENST00000243326 NR1D1P20393 614 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 UBE2SQ16763 222 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 BLIDQ8IZY5 108 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 FLT4P35916 1363 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 ACSL3O95573 720 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 PPP1R36Q96LQ0 422 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 PCDHA13Q9Y5I0 950 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 PLS3P13797 630 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 TMEM87BQ96K49 555 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 ALG13Q9NP73 1137 aaKnown RBP8.22□□□□□ -1.09
RIF1-201ENST00000243326 SGK1O00141 431 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 CHL1O00533 1208 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 KRT81Q14533 505 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 SULF1Q8IWU6 871 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 OR2W6PQ8NHA6 318 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 MAGOHBQ96A72 148 aaKnown RBP8.22□□□□□ -1.09
RIF1-201ENST00000243326 ITKQ08881 620 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 DNM3Q9UQ16 869 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 E2F8A0AVK6 867 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 TMOD1P28289 359 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 DOK7Q18PE1 504 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 TADA2BQ86TJ2 420 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 RAB17Q9H0T7 212 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 ZC3H18Q86VM9 953 aaKnown RBP8.21□□□□□ -1.09
RIF1-201ENST00000243326 PDCD7Q8N8D1 485 aaKnown RBP8.21□□□□□ -1.09
RIF1-201ENST00000243326 ZSCAN10Q96SZ4 725 aaPredicted RBP8.21□□□□□ -1.09
RIF1-201ENST00000243326 CD248Q9HCU0 757 aa8.21□□□□□ -1.09
RIF1-201ENST00000243326 IRAK4Q9NWZ3 460 aa8.21□□□□□ -1.09
RIF1-201ENST00000243326 GTPBP6O43824 516 aaPredicted RBP8.21□□□□□ -1.09
RIF1-201ENST00000243326 PABPC4Q13310 644 aaKnown RBP eCLIP8.21□□□□□ -1.09
RIF1-201ENST00000243326 ZBTB41Q5SVQ8 909 aa8.21□□□□□ -1.09
RIF1-201ENST00000243326 MICAL3Q7RTP6 2002 aa8.21□□□□□ -1.09
RIF1-201ENST00000243326 TRPC3Q13507 836 aa8.21□□□□□ -1.09
RIF1-201ENST00000243326 C8orf37Q96NL8 207 aa8.21□□□□□ -1.09
RIF1-201ENST00000243326 ZWILCHQ9H900 591 aa8.21□□□□□ -1.09
RIF1-201ENST00000243326 IBTKQ9P2D0 1353 aaPredicted RBP8.21□□□□□ -1.09
RIF1-201ENST00000243326 ATP5JP18859 108 aa8.21□□□□□ -1.09
RIF1-201ENST00000243326 POLA2Q14181 598 aa8.21□□□□□ -1.09
RIF1-201ENST00000243326 ECT2Q9H8V3 914 aa8.21□□□□□ -1.09
RIF1-201ENST00000243326 CYP21A2P08686 494 aa8.21□□□□□ -1.1
RIF1-201ENST00000243326 GNAT2P19087 354 aa8.21□□□□□ -1.1
RIF1-201ENST00000243326 PUM3Q15397 648 aaKnown RBP8.21□□□□□ -1.1
RIF1-201ENST00000243326 CC2D1AQ6P1N0 951 aaPredicted RBP8.21□□□□□ -1.1
RIF1-201ENST00000243326 PAGR1Q9BTK6 254 aa8.21□□□□□ -1.1
RIF1-201ENST00000243326 SUFUQ9UMX1 484 aa8.21□□□□□ -1.1
RIF1-201ENST00000243326 TNKSO95271 1327 aa8.21□□□□□ -1.1
RIF1-201ENST00000243326 SOS2Q07890 1332 aaPredicted RBP8.21□□□□□ -1.1
RIF1-201ENST00000243326 PP2D1A8MPX8 630 aa8.21□□□□□ -1.1
RIF1-201ENST00000243326 IFNL3Q8IZI9 196 aa8.21□□□□□ -1.1
RIF1-201ENST00000243326 PPM1KQ8N3J5 372 aa8.21□□□□□ -1.1
RIF1-201ENST00000243326 TUBGCP2Q9BSJ2 902 aa8.21□□□□□ -1.1
RIF1-201ENST00000243326 ZCWPW1Q9H0M4 648 aa8.21□□□□□ -1.1
RIF1-201ENST00000243326 NEURL1BA8MQ27 555 aa8.21□□□□□ -1.1
RIF1-201ENST00000243326 SLC16A2P36021 539 aa8.21□□□□□ -1.1
RIF1-201ENST00000243326 KCTD1Q719H9 257 aa8.21□□□□□ -1.1
RIF1-201ENST00000243326 RETREG2Q8NC44 543 aa8.21□□□□□ -1.1
RIF1-201ENST00000243326 DDX12PQ92771 950 aa8.21□□□□□ -1.1
RIF1-201ENST00000243326 NLRP3Q96P20 1036 aa8.21□□□□□ -1.1
RIF1-201ENST00000243326 GNPATO15228 680 aa8.21□□□□□ -1.1
RIF1-201ENST00000243326 MAGEA9P43362 315 aa8.21□□□□□ -1.1
RIF1-201ENST00000243326 KRT31Q15323 416 aa8.21□□□□□ -1.1
RIF1-201ENST00000243326 OXER1Q8TDS5 423 aa8.21□□□□□ -1.1
RIF1-201ENST00000243326 ANKFY1Q9P2R3 1169 aa8.21□□□□□ -1.1
RIF1-201ENST00000243326 SNX24Q9Y343 169 aa8.21□□□□□ -1.1
RIF1-201ENST00000243326 CROCCQ5TZA2 2017 aa8.21□□□□□ -1.1
RIF1-201ENST00000243326 URB2Q14146 1524 aaKnown RBP8.21□□□□□ -1.1
RIF1-201ENST00000243326 K7ENM7 598 aa8.21□□□□□ -1.1
RIF1-201ENST00000243326 ADAM9Q13443 819 aa8.21□□□□□ -1.1
RIF1-201ENST00000243326 TRMT10CQ7L0Y3 403 aaKnown RBP8.21□□□□□ -1.1
RIF1-201ENST00000243326 MCUQ8NE86 351 aa8.21□□□□□ -1.1
RIF1-201ENST00000243326 COA7Q96BR5 231 aa8.21□□□□□ -1.1
RIF1-201ENST00000243326 RTEL1Q9NZ71 1219 aa8.21□□□□□ -1.1
RIF1-201ENST00000243326 PPP1R9AQ9ULJ8 1098 aa8.21□□□□□ -1.1
RIF1-201ENST00000243326 PDE4DIPQ5VU43 2346 aa8.21□□□□□ -1.1
RIF1-201ENST00000243326 SNAP23O00161 211 aa8.21□□□□□ -1.1
RIF1-201ENST00000243326 PHKA1P46020 1223 aa8.21□□□□□ -1.1
RIF1-201ENST00000243326 GFPT1Q06210 699 aaPredicted RBP8.21□□□□□ -1.1
RIF1-201ENST00000243326 PASD1Q8IV76 773 aa8.21□□□□□ -1.1
RIF1-201ENST00000243326 ORAI2Q96SN7 254 aa8.21□□□□□ -1.1
RIF1-201ENST00000243326 EIF4A1P60842 406 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms