RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 SEMA6BQ9H3T3 888 aa13.36□□□□□ -0.27
SEC61A1-201ENST00000243253 ARHGAP20Q9P2F6 1191 aa13.36□□□□□ -0.27
SEC61A1-201ENST00000243253 SALL4Q9UJQ4 1053 aa13.36□□□□□ -0.27
SEC61A1-201ENST00000243253 GREB1LQ9C091 1923 aaPredicted RBP13.36□□□□□ -0.27
SEC61A1-201ENST00000243253 PRLRP16471 622 aa13.36□□□□□ -0.27
SEC61A1-201ENST00000243253 STAT6P42226 847 aa13.36□□□□□ -0.27
SEC61A1-201ENST00000243253 EHHADHQ08426 723 aa13.36□□□□□ -0.27
SEC61A1-201ENST00000243253 MAPKAPK5Q8IW41 473 aa13.36□□□□□ -0.27
SEC61A1-201ENST00000243253 MMGT1Q8N4V1 131 aa13.36□□□□□ -0.27
SEC61A1-201ENST00000243253 CTCFLQ8NI51 663 aaPredicted RBP13.36□□□□□ -0.27
SEC61A1-201ENST00000243253 HDAC7Q8WUI4 952 aa13.36□□□□□ -0.27
SEC61A1-201ENST00000243253 TCP11L1Q9NUJ3 509 aa13.36□□□□□ -0.27
SEC61A1-201ENST00000243253 EXOC1Q9NV70 894 aa13.36□□□□□ -0.27
SEC61A1-201ENST00000243253 PLAGL2Q9UPG8 496 aa13.36□□□□□ -0.27
SEC61A1-201ENST00000243253 CAPN6Q9Y6Q1 641 aa13.36□□□□□ -0.27
SEC61A1-201ENST00000243253 PALM3A6NDB9 673 aaPredicted RBP13.36□□□□□ -0.27
SEC61A1-201ENST00000243253 RIMBP2O15034 1052 aa13.36□□□□□ -0.27
SEC61A1-201ENST00000243253 SLURP2P0DP57 97 aa13.36□□□□□ -0.27
SEC61A1-201ENST00000243253 NOVP48745 357 aa13.36□□□□□ -0.27
SEC61A1-201ENST00000243253 ZBED6P86452 979 aa13.36□□□□□ -0.27
SEC61A1-201ENST00000243253 SLC10A5Q5PT55 438 aa13.36□□□□□ -0.27
SEC61A1-201ENST00000243253 TXNRD3Q86VQ6 643 aa13.36□□□□□ -0.27
SEC61A1-201ENST00000243253 DGKHQ86XP1 1220 aa13.36□□□□□ -0.27
SEC61A1-201ENST00000243253 DRC1Q96MC2 740 aa13.36□□□□□ -0.27
SEC61A1-201ENST00000243253 GNL3LQ9NVN8 582 aaKnown RBP13.36□□□□□ -0.27
SEC61A1-201ENST00000243253 BARHL2Q9NY43 387 aa13.36□□□□□ -0.27
SEC61A1-201ENST00000243253 GGCXP38435 758 aa13.35□□□□□ -0.27
SEC61A1-201ENST00000243253 CCDC122Q5T0U0 273 aa13.35□□□□□ -0.27
SEC61A1-201ENST00000243253 ARPP21Q9UBL0 812 aaPredicted RBP13.35□□□□□ -0.27
SEC61A1-201ENST00000243253 AHDC1Q5TGY3 1603 aaPredicted RBP13.35□□□□□ -0.27
SEC61A1-201ENST00000243253 MARCH6O60337 910 aa13.35□□□□□ -0.27
SEC61A1-201ENST00000243253 C12orf60Q5U649 245 aa13.35□□□□□ -0.27
SEC61A1-201ENST00000243253 CLEC10AQ8IUN9 316 aa13.35□□□□□ -0.27
SEC61A1-201ENST00000243253 GSPT2Q8IYD1 628 aaKnown RBP13.35□□□□□ -0.27
SEC61A1-201ENST00000243253 CCDC148Q8NFR7 591 aa13.35□□□□□ -0.27
SEC61A1-201ENST00000243253 SELENOOQ9BVL4 669 aa13.35□□□□□ -0.27
SEC61A1-201ENST00000243253 ZHX3Q9H4I2 956 aa13.35□□□□□ -0.27
SEC61A1-201ENST00000243253 TAF1LQ8IZX4 1826 aa13.35□□□□□ -0.27
SEC61A1-201ENST00000243253 USP17L3A6NCW0 530 aa13.34□□□□□ -0.27
SEC61A1-201ENST00000243253 USP17L4A6NCW7 530 aa13.34□□□□□ -0.27
SEC61A1-201ENST00000243253 LAD1O00515 517 aa13.34□□□□□ -0.27
SEC61A1-201ENST00000243253 PHACTR2O75167 634 aa13.34□□□□□ -0.27
SEC61A1-201ENST00000243253 FCER1AP12319 257 aa13.34□□□□□ -0.27
SEC61A1-201ENST00000243253 CCNE1P24864 410 aa13.34□□□□□ -0.27
SEC61A1-201ENST00000243253 MRPS25P82663 173 aaKnown RBP13.34□□□□□ -0.27
SEC61A1-201ENST00000243253 EZH2Q15910 746 aaKnown RBP13.34□□□□□ -0.27
SEC61A1-201ENST00000243253 CENPPQ6IPU0 288 aa13.34□□□□□ -0.27
SEC61A1-201ENST00000243253 USP17L1Q7RTZ2 530 aa13.34□□□□□ -0.27
SEC61A1-201ENST00000243253 ZMYND12Q9H0C1 365 aa13.34□□□□□ -0.27
SEC61A1-201ENST00000243253 SNX12Q9UMY4 172 aa13.34□□□□□ -0.27
SEC61A1-201ENST00000243253 LTBP1Q14766 1721 aa13.34□□□□□ -0.27
SEC61A1-201ENST00000243253 IVLP07476 585 aa13.34□□□□□ -0.27
SEC61A1-201ENST00000243253 CALML3P27482 149 aa13.34□□□□□ -0.27
SEC61A1-201ENST00000243253 NOC3LQ8WTT2 800 aaKnown RBP13.34□□□□□ -0.27
SEC61A1-201ENST00000243253 BAP1Q92560 729 aa13.34□□□□□ -0.27
SEC61A1-201ENST00000243253 P2RX5Q93086 422 aa13.34□□□□□ -0.27
SEC61A1-201ENST00000243253 SH2D4AQ9H788 454 aa13.34□□□□□ -0.27
SEC61A1-201ENST00000243253 ZPR1O75312 459 aa13.34□□□□□ -0.27
SEC61A1-201ENST00000243253 VAV2P52735 878 aa13.34□□□□□ -0.27
SEC61A1-201ENST00000243253 CORO7P57737 925 aa13.34□□□□□ -0.27
SEC61A1-201ENST00000243253 TXNRD1Q16881 649 aa13.34□□□□□ -0.27
SEC61A1-201ENST00000243253 PSMB7Q99436 277 aa13.34□□□□□ -0.27
SEC61A1-201ENST00000243253 RASSF4Q9H2L5 321 aa13.34□□□□□ -0.27
SEC61A1-201ENST00000243253 PJA2O43164 708 aa13.33□□□□□ -0.27
SEC61A1-201ENST00000243253 PLCG1P19174 1290 aa13.33□□□□□ -0.27
SEC61A1-201ENST00000243253 TNFRSF8P28908 595 aa13.33□□□□□ -0.27
SEC61A1-201ENST00000243253 TM4SF1P30408 202 aa13.33□□□□□ -0.27
SEC61A1-201ENST00000243253 KRT83P78385 493 aa13.33□□□□□ -0.27
SEC61A1-201ENST00000243253 DTHD1Q6ZMT9 781 aa13.33□□□□□ -0.27
SEC61A1-201ENST00000243253 SMCR8Q8TEV9 937 aaPredicted RBP13.33□□□□□ -0.27
SEC61A1-201ENST00000243253 NUP58Q9BVL2 599 aa13.33□□□□□ -0.27
SEC61A1-201ENST00000243253 CUEDC2Q9H467 287 aa13.33□□□□□ -0.27
SEC61A1-201ENST00000243253 ZMYND10O75800 440 aa13.33□□□□□ -0.28
SEC61A1-201ENST00000243253 CPP00450 1065 aa13.33□□□□□ -0.28
SEC61A1-201ENST00000243253 CYP27A1Q02318 531 aa13.33□□□□□ -0.28
SEC61A1-201ENST00000243253 HGSNATQ68CP4 663 aa13.33□□□□□ -0.28
SEC61A1-201ENST00000243253 CLEC4GQ6UXB4 293 aa13.33□□□□□ -0.28
SEC61A1-201ENST00000243253 KRT26Q7Z3Y9 468 aa13.33□□□□□ -0.28
SEC61A1-201ENST00000243253 RUBCNQ92622 972 aa13.33□□□□□ -0.28
SEC61A1-201ENST00000243253 CNOT6LQ96LI5 555 aaKnown RBP13.33□□□□□ -0.28
SEC61A1-201ENST00000243253 MAGEF1Q9HAY2 307 aa13.33□□□□□ -0.28
SEC61A1-201ENST00000243253 POLD4Q9HCU8 107 aa13.33□□□□□ -0.28
SEC61A1-201ENST00000243253 BLOC1S4Q9NUP1 217 aa13.33□□□□□ -0.28
SEC61A1-201ENST00000243253 DMGDHQ9UI17 866 aaKnown RBP13.33□□□□□ -0.28
SEC61A1-201ENST00000243253 INF2Q27J81 1249 aa13.33□□□□□ -0.28
SEC61A1-201ENST00000243253 CNNM4Q6P4Q7 775 aa13.33□□□□□ -0.28
SEC61A1-201ENST00000243253 PACS2Q86VP3 889 aa13.33□□□□□ -0.28
SEC61A1-201ENST00000243253 TGFBRAP1Q8WUH2 860 aa13.33□□□□□ -0.28
SEC61A1-201ENST00000243253 TRIM34Q9BYJ4 488 aa13.33□□□□□ -0.28
SEC61A1-201ENST00000243253 RBAK-RBAKDNI3L0D1 243 aa13.32□□□□□ -0.28
SEC61A1-201ENST00000243253 C2orf54Q08AI8 447 aa13.32□□□□□ -0.28
SEC61A1-201ENST00000243253 PNMA1Q8ND90 353 aa13.32□□□□□ -0.28
SEC61A1-201ENST00000243253 RRP36Q96EU6 259 aaKnown RBP13.32□□□□□ -0.28
SEC61A1-201ENST00000243253 MTMR9Q96QG7 549 aa13.32□□□□□ -0.28
SEC61A1-201ENST00000243253 GALNT17Q6IS24 598 aa13.32□□□□□ -0.28
SEC61A1-201ENST00000243253 HPS3Q969F9 1004 aa13.32□□□□□ -0.28
SEC61A1-201ENST00000243253 AK8Q96MA6 479 aa13.32□□□□□ -0.28
SEC61A1-201ENST00000243253 VGLL3A8MV65 326 aa13.32□□□□□ -0.28
SEC61A1-201ENST00000243253 C6orf229H3BNL8 230 aa13.32□□□□□ -0.28
SEC61A1-201ENST00000243253 KRT86O43790 486 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms