RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 BLIDQ8IZY5 108 aa15.07■□□□□ 0
SLIRP-201ENST00000238688 STAG2Q8N3U4 1231 aa15.07■□□□□ 0
SLIRP-201ENST00000238688 ACER1Q8TDN7 264 aa15.07■□□□□ 0
SLIRP-201ENST00000238688 FERMT2Q96AC1 680 aa15.07■□□□□ 0
SLIRP-201ENST00000238688 MTMR8Q96EF0 704 aa15.07■□□□□ 0
SLIRP-201ENST00000238688 CCDC34Q96HJ3 373 aa15.07■□□□□ 0
SLIRP-201ENST00000238688 PGBD1Q96JS3 809 aa15.07■□□□□ 0
SLIRP-201ENST00000238688 C12orf42Q96LP6 360 aa15.07■□□□□ 0
SLIRP-201ENST00000238688 TIGD1Q96MW7 591 aa15.07■□□□□ 0
SLIRP-201ENST00000238688 PYM1Q9BRP8 204 aaKnown RBP15.07■□□□□ 0
SLIRP-201ENST00000238688 CLSTN2Q9H4D0 955 aa15.07■□□□□ 0
SLIRP-201ENST00000238688 C6orf50Q9HD87 102 aa15.07■□□□□ 0
SLIRP-201ENST00000238688 VPS54Q9P1Q0 977 aa15.07■□□□□ 0
SLIRP-201ENST00000238688 RBPJLQ9UBG7 517 aa15.07■□□□□ 0
SLIRP-201ENST00000238688 PARP14Q460N5 1801 aa15.06■□□□□ 0
SLIRP-201ENST00000238688 PNMA6FA0A0J9YX94 578 aa15.06■□□□□ 0
SLIRP-201ENST00000238688 CYTH3O43739 400 aa15.06■□□□□ 0
SLIRP-201ENST00000238688 PLA2G6O60733 806 aa15.06■□□□□ 0
SLIRP-201ENST00000238688 KINO60870 393 aaKnown RBP15.06■□□□□ 0
SLIRP-201ENST00000238688 CCL5P13501 91 aa15.06■□□□□ 0
SLIRP-201ENST00000238688 NPY5RQ15761 445 aa15.06■□□□□ 0
SLIRP-201ENST00000238688 Q3C1V9 767 aa15.06■□□□□ 0
SLIRP-201ENST00000238688 KRT25Q7Z3Z0 450 aa15.06■□□□□ 0
SLIRP-201ENST00000238688 UBE2Q1Q7Z7E8 422 aa15.06■□□□□ 0
SLIRP-201ENST00000238688 CMTR1Q8N1G2 835 aaKnown RBP15.06■□□□□ 0
SLIRP-201ENST00000238688 KRI1Q8N9T8 703 aaKnown RBP15.06■□□□□ 0
SLIRP-201ENST00000238688 SLAIN1Q8ND83 568 aa15.06■□□□□ 0
SLIRP-201ENST00000238688 PXYLP1Q8TE99 480 aa15.06■□□□□ 0
SLIRP-201ENST00000238688 UNC93B1Q9H1C4 597 aa15.06■□□□□ 0
SLIRP-201ENST00000238688 TMOD4Q9NZQ9 345 aa15.06■□□□□ 0
SLIRP-201ENST00000238688 PCDHA7Q9UN72 937 aa15.06■□□□□ 0
SLIRP-201ENST00000238688 KCNJ14Q9UNX9 436 aa15.06■□□□□ 0
SLIRP-201ENST00000238688 STXBP3O00186 592 aa15.05■□□□□ -0
SLIRP-201ENST00000238688 PPFIA3O75145 1194 aa15.05■□□□□ -0
SLIRP-201ENST00000238688 SLC34A2O95436 690 aa15.05■□□□□ -0
SLIRP-201ENST00000238688 GJB1P08034 283 aa15.05■□□□□ -0
SLIRP-201ENST00000238688 CCDC192P0DO97 292 aa15.05■□□□□ -0
SLIRP-201ENST00000238688 EEF2P13639 858 aaKnown RBP15.05■□□□□ -0
SLIRP-201ENST00000238688 GJA8P48165 433 aa15.05■□□□□ -0
SLIRP-201ENST00000238688 HERVK_113P62684 666 aa15.05■□□□□ -0
SLIRP-201ENST00000238688 ARL6IP4Q66PJ3 421 aaKnown RBP15.05■□□□□ -0
SLIRP-201ENST00000238688 USP17L2Q6R6M4 530 aa15.05■□□□□ -0
SLIRP-201ENST00000238688 BTNL9Q6UXG8 535 aa15.05■□□□□ -0
SLIRP-201ENST00000238688 CCAR1Q8IX12 1150 aaKnown RBP15.05■□□□□ -0
SLIRP-201ENST00000238688 ANP32BQ92688 251 aaKnown RBP15.05■□□□□ -0
SLIRP-201ENST00000238688 TSPY26PQ9H489 355 aa15.05■□□□□ -0
SLIRP-201ENST00000238688 GRPEL1Q9HAV7 217 aa15.05■□□□□ -0
SLIRP-201ENST00000238688 GOPCQ9HD26 462 aa15.05■□□□□ -0
SLIRP-201ENST00000238688 DACT1Q9NYF0 836 aa15.05■□□□□ -0
SLIRP-201ENST00000238688 PNMA2Q9UL42 364 aa15.05■□□□□ -0
SLIRP-201ENST00000238688 CLIC4Q9Y696 253 aa15.05■□□□□ -0
SLIRP-201ENST00000238688 ALPK3Q96L96 1907 aa15.05■□□□□ -0
SLIRP-201ENST00000238688 A0A1W2PRG0 241 aa15.04■□□□□ -0
SLIRP-201ENST00000238688 M0R2N6 131 aa15.04■□□□□ -0
SLIRP-201ENST00000238688 DTNBO60941 627 aa15.04■□□□□ -0
SLIRP-201ENST00000238688 PTPREP23469 700 aa15.04■□□□□ -0
SLIRP-201ENST00000238688 SLC1A4P43007 532 aa15.04■□□□□ -0
SLIRP-201ENST00000238688 IRX3P78415 501 aaPredicted RBP15.04■□□□□ -0
SLIRP-201ENST00000238688 SEPT2Q15019 361 aa15.04■□□□□ -0
SLIRP-201ENST00000238688 AXDND1Q5T1B0 1012 aaPredicted RBP15.04■□□□□ -0
SLIRP-201ENST00000238688 COA7Q96BR5 231 aa15.04■□□□□ -0
SLIRP-201ENST00000238688 NAP1L4Q99733 375 aaKnown RBP15.04■□□□□ -0
SLIRP-201ENST00000238688 KIAA1683Q9H0B3 1180 aa15.04■□□□□ -0
SLIRP-201ENST00000238688 TNMDQ9H2S6 317 aa15.04■□□□□ -0
SLIRP-201ENST00000238688 GJB4Q9NTQ9 266 aa15.04■□□□□ -0
SLIRP-201ENST00000238688 HOOK1Q9UJC3 728 aaKnown RBP15.04■□□□□ -0
SLIRP-201ENST00000238688 CCDC194A0A1B0GVG4 234 aa15.03■□□□□ -0
SLIRP-201ENST00000238688 SYCE3A1L190 88 aa15.03■□□□□ -0
SLIRP-201ENST00000238688 ZBTB5O15062 677 aa15.03■□□□□ -0
SLIRP-201ENST00000238688 CNMDO75829 334 aa15.03■□□□□ -0
SLIRP-201ENST00000238688 INHAP05111 366 aa15.03■□□□□ -0
SLIRP-201ENST00000238688 NAPAP54920 295 aa15.03■□□□□ -0
SLIRP-201ENST00000238688 ZYXQ15942 572 aaKnown RBP15.03■□□□□ -0
SLIRP-201ENST00000238688 UVSSAQ2YD98 709 aa15.03■□□□□ -0
SLIRP-201ENST00000238688 SLFN13Q68D06 897 aa15.03■□□□□ -0
SLIRP-201ENST00000238688 WWC2Q6AWC2 1192 aa15.03■□□□□ -0
SLIRP-201ENST00000238688 HEATR3Q7Z4Q2 680 aa15.03■□□□□ -0
SLIRP-201ENST00000238688 SIAH1Q8IUQ4 282 aa15.03■□□□□ -0
SLIRP-201ENST00000238688 LRRC47Q8N1G4 583 aaKnown RBP15.03■□□□□ -0
SLIRP-201ENST00000238688 FSIP1Q8NA03 581 aa15.03■□□□□ -0
SLIRP-201ENST00000238688 ENGASEQ8NFI3 743 aa15.03■□□□□ -0
SLIRP-201ENST00000238688 RNF208Q9H0X6 261 aa15.03■□□□□ -0
SLIRP-201ENST00000238688 USP25Q9UHP3 1055 aa15.03■□□□□ -0
SLIRP-201ENST00000238688 TMX2Q9Y320 296 aa15.03■□□□□ -0
SLIRP-201ENST00000238688 SRPRBQ9Y5M8 271 aaKnown RBP15.03■□□□□ -0
SLIRP-201ENST00000238688 ZNFX1Q9P2E3 1918 aaKnown RBP15.02■□□□□ -0
SLIRP-201ENST00000238688 LIG1P18858 919 aa15.02■□□□□ -0
SLIRP-201ENST00000238688 VCAM1P19320 739 aa15.02■□□□□ -0
SLIRP-201ENST00000238688 TOB1P50616 345 aaPredicted RBP15.02■□□□□ -0
SLIRP-201ENST00000238688 UBXN2AP68543 259 aa15.02■□□□□ -0
SLIRP-201ENST00000238688 CEBPZQ03701 1054 aaKnown RBP15.02■□□□□ -0
SLIRP-201ENST00000238688 TRIM32Q13049 653 aa15.02■□□□□ -0
SLIRP-201ENST00000238688 NR5A1Q13285 461 aa15.02■□□□□ -0
SLIRP-201ENST00000238688 CCDC96Q2M329 555 aa15.02■□□□□ -0
SLIRP-201ENST00000238688 KIAA1755Q5JYT7 1200 aa15.02■□□□□ -0
SLIRP-201ENST00000238688 TTC38Q5R3I4 469 aa15.02■□□□□ -0
SLIRP-201ENST00000238688 RESP18Q5W5W9 173 aa15.02■□□□□ -0
SLIRP-201ENST00000238688 CATSPERGQ6ZRH7 1159 aa15.02■□□□□ -0
SLIRP-201ENST00000238688 FMR1NBQ8N0W7 255 aaPredicted RBP15.02■□□□□ -0
SLIRP-201ENST00000238688 LPAR1Q92633 364 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms