RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 ICAM1P05362 532 aa17.24■□□□□ 0.35
HDHD3-201ENST00000238379 GCFC2P16383 781 aaKnown RBP17.24■□□□□ 0.35
HDHD3-201ENST00000238379 USP11P51784 963 aa17.24■□□□□ 0.35
HDHD3-201ENST00000238379 PNOCQ13519 176 aa17.24■□□□□ 0.35
HDHD3-201ENST00000238379 VGLL4Q14135 290 aa17.24■□□□□ 0.35
HDHD3-201ENST00000238379 UVSSAQ2YD98 709 aa17.24■□□□□ 0.35
HDHD3-201ENST00000238379 DHX58Q96C10 678 aa17.24■□□□□ 0.35
HDHD3-201ENST00000238379 DNAJC25Q9H1X3 360 aa17.24■□□□□ 0.35
HDHD3-201ENST00000238379 PPP1R9AQ9ULJ8 1098 aa17.24■□□□□ 0.35
HDHD3-201ENST00000238379 MRPL11Q9Y3B7 192 aaKnown RBP17.24■□□□□ 0.35
HDHD3-201ENST00000238379 MYH7BA7E2Y1 1941 aa17.24■□□□□ 0.35
HDHD3-201ENST00000238379 ABCB11O95342 1321 aa17.24■□□□□ 0.35
HDHD3-201ENST00000238379 A0A087WWV3 80 aa17.24■□□□□ 0.35
HDHD3-201ENST00000238379 IQCA1LA6NCM1 817 aa17.24■□□□□ 0.35
HDHD3-201ENST00000238379 FOXN1O15353 648 aa17.24■□□□□ 0.35
HDHD3-201ENST00000238379 FLOT1O75955 427 aa17.24■□□□□ 0.35
HDHD3-201ENST00000238379 CAVIN2O95810 425 aa17.24■□□□□ 0.35
HDHD3-201ENST00000238379 SLFN14P0C7P3 912 aa17.24■□□□□ 0.35
HDHD3-201ENST00000238379 CDC25AP30304 524 aa17.24■□□□□ 0.35
HDHD3-201ENST00000238379 HOXA13P31271 388 aaPredicted RBP17.24■□□□□ 0.35
HDHD3-201ENST00000238379 HMGCS2P54868 508 aa17.24■□□□□ 0.35
HDHD3-201ENST00000238379 E2F4Q16254 413 aa17.24■□□□□ 0.35
HDHD3-201ENST00000238379 CALCRLQ16602 461 aa17.24■□□□□ 0.35
HDHD3-201ENST00000238379 KANK3Q6NY19 840 aa17.24■□□□□ 0.35
HDHD3-201ENST00000238379 TBC1D5Q92609 795 aa17.24■□□□□ 0.35
HDHD3-201ENST00000238379 CDCA5Q96FF9 252 aa17.24■□□□□ 0.35
HDHD3-201ENST00000238379 NAP1L4Q99733 375 aaKnown RBP17.24■□□□□ 0.35
HDHD3-201ENST00000238379 SLC38A10Q9HBR0 1119 aa17.24■□□□□ 0.35
HDHD3-201ENST00000238379 ANO10Q9NW15 660 aa17.24■□□□□ 0.35
HDHD3-201ENST00000238379 SCN4AP35499 1836 aa17.23■□□□□ 0.35
HDHD3-201ENST00000238379 CYP3A7-CYP3A51PA0A087WV96 503 aa17.23■□□□□ 0.35
HDHD3-201ENST00000238379 SPDYE3A6NKU9 549 aa17.23■□□□□ 0.35
HDHD3-201ENST00000238379 CYP3A7P24462 503 aa17.23■□□□□ 0.35
HDHD3-201ENST00000238379 SREBF1P36956 1147 aa17.23■□□□□ 0.35
HDHD3-201ENST00000238379 POSTNQ15063 836 aa17.23■□□□□ 0.35
HDHD3-201ENST00000238379 AK8Q96MA6 479 aa17.23■□□□□ 0.35
HDHD3-201ENST00000238379 AGBL1Q96MI9 1066 aa17.23■□□□□ 0.35
HDHD3-201ENST00000238379 DDX25Q9UHL0 483 aaKnown RBP17.23■□□□□ 0.35
HDHD3-201ENST00000238379 USP25Q9UHP3 1055 aa17.23■□□□□ 0.35
HDHD3-201ENST00000238379 HOOK1Q9UJC3 728 aaKnown RBP17.23■□□□□ 0.35
HDHD3-201ENST00000238379 PAPPA2Q9BXP8 1791 aa17.23■□□□□ 0.35
HDHD3-201ENST00000238379 PP2D1A8MPX8 630 aa17.22■□□□□ 0.35
HDHD3-201ENST00000238379 ZNF165P49910 485 aa17.22■□□□□ 0.35
HDHD3-201ENST00000238379 ARHGAP4P98171 946 aa17.22■□□□□ 0.35
HDHD3-201ENST00000238379 MOXD1Q6UVY6 613 aa17.22■□□□□ 0.35
HDHD3-201ENST00000238379 C11orf57Q6ZUT1 292 aaPredicted RBP17.22■□□□□ 0.35
HDHD3-201ENST00000238379 SH3RF1Q7Z6J0 888 aa17.22■□□□□ 0.35
HDHD3-201ENST00000238379 MBOAT7Q96N66 472 aa17.22■□□□□ 0.35
HDHD3-201ENST00000238379 PYM1Q9BRP8 204 aaKnown RBP17.22■□□□□ 0.35
HDHD3-201ENST00000238379 CCSER1Q9C0I3 900 aa17.22■□□□□ 0.35
HDHD3-201ENST00000238379 CBX8Q9HC52 389 aa17.22■□□□□ 0.35
HDHD3-201ENST00000238379 CCPG1Q9ULG6 757 aa17.22■□□□□ 0.35
HDHD3-201ENST00000238379 PCDHA5Q9Y5H7 936 aa17.22■□□□□ 0.35
HDHD3-201ENST00000238379 GCOM1H8Y6P7 765 aaPredicted RBP17.21■□□□□ 0.35
HDHD3-201ENST00000238379 CFBP00751 764 aa17.21■□□□□ 0.35
HDHD3-201ENST00000238379 POLR2MP0CAP2 368 aa17.21■□□□□ 0.35
HDHD3-201ENST00000238379 TXLNAP40222 546 aa17.21■□□□□ 0.35
HDHD3-201ENST00000238379 TXKP42681 527 aa17.21■□□□□ 0.35
HDHD3-201ENST00000238379 EAPPQ56P03 285 aaPredicted RBP17.21■□□□□ 0.35
HDHD3-201ENST00000238379 SH3D19Q5HYK7 790 aa17.21■□□□□ 0.35
HDHD3-201ENST00000238379 IGSF22Q8N9C0 903 aa17.21■□□□□ 0.35
HDHD3-201ENST00000238379 IQUBQ8NA54 791 aa17.21■□□□□ 0.35
HDHD3-201ENST00000238379 BIN1O00499 593 aa17.21■□□□□ 0.35
HDHD3-201ENST00000238379 PRR29P0C7W0 189 aa17.21■□□□□ 0.35
HDHD3-201ENST00000238379 FDX1P10109 184 aa17.21■□□□□ 0.35
HDHD3-201ENST00000238379 UBA7P41226 1012 aa17.21■□□□□ 0.35
HDHD3-201ENST00000238379 TECP42680 631 aa17.21■□□□□ 0.35
HDHD3-201ENST00000238379 IREB2P48200 963 aaKnown RBP17.21■□□□□ 0.35
HDHD3-201ENST00000238379 FXR2P51116 673 aaKnown RBP eCLIP17.21■□□□□ 0.35
HDHD3-201ENST00000238379 NT5DC1Q5TFE4 455 aa17.21■□□□□ 0.35
HDHD3-201ENST00000238379 PNMA8AQ86V59 439 aaPredicted RBP17.21■□□□□ 0.35
HDHD3-201ENST00000238379 GRAMD1CQ8IYS0 662 aa17.21■□□□□ 0.35
HDHD3-201ENST00000238379 RBM46Q8TBY0 533 aaKnown RBP17.21■□□□□ 0.35
HDHD3-201ENST00000238379 HAS1Q92839 578 aa17.21■□□□□ 0.35
HDHD3-201ENST00000238379 CSADQ9Y600 493 aa17.21■□□□□ 0.35
HDHD3-201ENST00000238379 VWA5AO00534 786 aa17.2■□□□□ 0.34
HDHD3-201ENST00000238379 NF2P35240 595 aa17.2■□□□□ 0.34
HDHD3-201ENST00000238379 SARSP49591 514 aaKnown RBP17.2■□□□□ 0.34
HDHD3-201ENST00000238379 NLRP12P59046 1061 aa17.2■□□□□ 0.34
HDHD3-201ENST00000238379 KARSQ15046 597 aaKnown RBP17.2■□□□□ 0.34
HDHD3-201ENST00000238379 DPCR1Q3MIW9 517 aa17.2■□□□□ 0.34
HDHD3-201ENST00000238379 PDXDC2PQ6P474 469 aa17.2■□□□□ 0.34
HDHD3-201ENST00000238379 LUZP1Q86V48 1076 aa17.2■□□□□ 0.34
HDHD3-201ENST00000238379 FCHSD1Q86WN1 690 aa17.2■□□□□ 0.34
HDHD3-201ENST00000238379 CEP57L1Q8IYX8 460 aa17.2■□□□□ 0.34
HDHD3-201ENST00000238379 CPXCR1Q8N123 301 aa17.2■□□□□ 0.34
HDHD3-201ENST00000238379 SPATA20Q8TB22 786 aa17.2■□□□□ 0.34
HDHD3-201ENST00000238379 CLEC4DQ8WXI8 215 aa17.2■□□□□ 0.34
HDHD3-201ENST00000238379 ANP32BQ92688 251 aaKnown RBP17.2■□□□□ 0.34
HDHD3-201ENST00000238379 ATG4CQ96DT6 458 aa17.2■□□□□ 0.34
HDHD3-201ENST00000238379 PAGE5Q96GU1 130 aa17.2■□□□□ 0.34
HDHD3-201ENST00000238379 RAVER2Q9HCJ3 691 aaKnown RBP17.2■□□□□ 0.34
HDHD3-201ENST00000238379 TMOD4Q9NZQ9 345 aa17.2■□□□□ 0.34
HDHD3-201ENST00000238379 PARP14Q460N5 1801 aa17.2■□□□□ 0.34
HDHD3-201ENST00000238379 WDR90Q96KV7 1748 aa17.2■□□□□ 0.34
HDHD3-201ENST00000238379 ZBED4O75132 1171 aa17.19■□□□□ 0.34
HDHD3-201ENST00000238379 CYP3A4P08684 503 aa17.19■□□□□ 0.34
HDHD3-201ENST00000238379 CIITAP33076 1130 aa17.19■□□□□ 0.34
HDHD3-201ENST00000238379 PDIA5Q14554 519 aa17.19■□□□□ 0.34
HDHD3-201ENST00000238379 IQCB1Q15051 598 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms