RNA–Protein interactions for RNA: ENST00000231484.3

PCDH12-201, Transcript of protocadherin 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH12, Length 6,562 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH12-201ENST00000231484 ANKRD2Q9GZV1 360 aa12.72□□□□□ -0.37
PCDH12-201ENST00000231484 SH2D4AQ9H788 454 aa12.72□□□□□ -0.37
PCDH12-201ENST00000231484 CD248Q9HCU0 757 aa12.72□□□□□ -0.37
PCDH12-201ENST00000231484 WASLO00401 505 aaPredicted RBP12.72□□□□□ -0.37
PCDH12-201ENST00000231484 SNRPA1P09661 255 aaKnown RBP12.72□□□□□ -0.37
PCDH12-201ENST00000231484 XRCC5P13010 732 aaKnown RBP12.72□□□□□ -0.37
PCDH12-201ENST00000231484 GSDMAQ96QA5 445 aa12.72□□□□□ -0.37
PCDH12-201ENST00000231484 DSCC1Q9BVC3 393 aa12.72□□□□□ -0.37
PCDH12-201ENST00000231484 SLC40A1Q9NP59 571 aa12.72□□□□□ -0.37
PCDH12-201ENST00000231484 TBC1D23Q9NUY8 699 aa12.72□□□□□ -0.37
PCDH12-201ENST00000231484 TBK1Q9UHD2 729 aa12.72□□□□□ -0.37
PCDH12-201ENST00000231484 PCDHA13Q9Y5I0 950 aa12.72□□□□□ -0.37
PCDH12-201ENST00000231484 PRAG1Q86YV5 1406 aa12.71□□□□□ -0.37
PCDH12-201ENST00000231484 SYF2O95926 243 aaKnown RBP12.71□□□□□ -0.37
PCDH12-201ENST00000231484 S100BP04271 92 aaPredicted RBP12.71□□□□□ -0.37
PCDH12-201ENST00000231484 USP14P54578 494 aa12.71□□□□□ -0.37
PCDH12-201ENST00000231484 CCDC144BQ3MJ40 725 aa12.71□□□□□ -0.37
PCDH12-201ENST00000231484 SEPT8Q92599 483 aa12.71□□□□□ -0.37
PCDH12-201ENST00000231484 CNOT6LQ96LI5 555 aaKnown RBP12.71□□□□□ -0.37
PCDH12-201ENST00000231484 BAG5Q9UL15 447 aa12.71□□□□□ -0.37
PCDH12-201ENST00000231484 TARSL2A2RTX5 802 aaKnown RBP12.71□□□□□ -0.37
PCDH12-201ENST00000231484 FTCDO95954 541 aa12.71□□□□□ -0.37
PCDH12-201ENST00000231484 PARP1P09874 1014 aaKnown RBP12.71□□□□□ -0.37
PCDH12-201ENST00000231484 GARSP41250 739 aaKnown RBP12.71□□□□□ -0.37
PCDH12-201ENST00000231484 SLC39A6Q13433 755 aa12.71□□□□□ -0.37
PCDH12-201ENST00000231484 DZIP3Q86Y13 1208 aaKnown RBP12.71□□□□□ -0.37
PCDH12-201ENST00000231484 PHF8Q9UPP1 1060 aa12.71□□□□□ -0.37
PCDH12-201ENST00000231484 IFT140Q96RY7 1462 aa12.71□□□□□ -0.37
PCDH12-201ENST00000231484 MFAP3LO75121 409 aa12.71□□□□□ -0.37
PCDH12-201ENST00000231484 HSPA6P17066 643 aa12.71□□□□□ -0.37
PCDH12-201ENST00000231484 MRPS15P82914 257 aaKnown RBP12.71□□□□□ -0.37
PCDH12-201ENST00000231484 PTH1RQ03431 593 aa12.71□□□□□ -0.37
PCDH12-201ENST00000231484 TNNI3KQ59H18 835 aa12.71□□□□□ -0.37
PCDH12-201ENST00000231484 RSPH3Q86UC2 560 aa12.71□□□□□ -0.37
PCDH12-201ENST00000231484 ZNF653Q96CK0 615 aa12.71□□□□□ -0.37
PCDH12-201ENST00000231484 LRRC37BQ96QE4 947 aa12.71□□□□□ -0.37
PCDH12-201ENST00000231484 ANAPC5Q9UJX4 755 aa12.71□□□□□ -0.37
PCDH12-201ENST00000231484 MAN1B1Q9UKM7 699 aa12.71□□□□□ -0.37
PCDH12-201ENST00000231484 JAG2Q9Y219 1238 aa12.71□□□□□ -0.37
PCDH12-201ENST00000231484 AFG3L2Q9Y4W6 797 aa12.71□□□□□ -0.37
PCDH12-201ENST00000231484 FPGT-TNNI3KV9GXZ4 949 aa12.71□□□□□ -0.37
PCDH12-201ENST00000231484 A0A087WWV3 80 aa12.71□□□□□ -0.38
PCDH12-201ENST00000231484 PER1O15534 1290 aaPredicted RBP12.71□□□□□ -0.38
PCDH12-201ENST00000231484 CHMP2AO43633 222 aa12.71□□□□□ -0.38
PCDH12-201ENST00000231484 MYOCDQ8IZQ8 938 aa12.71□□□□□ -0.38
PCDH12-201ENST00000231484 ZNF513Q8N8E2 541 aaPredicted RBP12.71□□□□□ -0.38
PCDH12-201ENST00000231484 MAML1Q92585 1016 aa12.71□□□□□ -0.38
PCDH12-201ENST00000231484 ZBTB21Q9ULJ3 1066 aa12.71□□□□□ -0.38
PCDH12-201ENST00000231484 MYO1FO00160 1098 aa12.71□□□□□ -0.38
PCDH12-201ENST00000231484 SPARCL1Q14515 664 aa12.71□□□□□ -0.38
PCDH12-201ENST00000231484 POLR3EQ9NVU0 708 aa12.71□□□□□ -0.38
PCDH12-201ENST00000231484 CEBPAP49715 358 aaPredicted RBP12.7□□□□□ -0.38
PCDH12-201ENST00000231484 DR1Q01658 176 aa12.7□□□□□ -0.38
PCDH12-201ENST00000231484 KRT24Q2M2I5 525 aa12.7□□□□□ -0.38
PCDH12-201ENST00000231484 KRT25Q7Z3Z0 450 aa12.7□□□□□ -0.38
PCDH12-201ENST00000231484 ZNF710Q8N1W2 664 aa12.7□□□□□ -0.38
PCDH12-201ENST00000231484 TESK2Q96S53 571 aa12.7□□□□□ -0.38
PCDH12-201ENST00000231484 CAPN11Q9UMQ6 739 aa12.7□□□□□ -0.38
PCDH12-201ENST00000231484 TOPBP1Q92547 1522 aa12.7□□□□□ -0.38
PCDH12-201ENST00000231484 PPP1R37O75864 691 aa12.7□□□□□ -0.38
PCDH12-201ENST00000231484 RUBCNQ92622 972 aa12.7□□□□□ -0.38
PCDH12-201ENST00000231484 TRIM55Q9BYV6 548 aa12.7□□□□□ -0.38
PCDH12-201ENST00000231484 DDX28Q9NUL7 540 aaKnown RBP12.7□□□□□ -0.38
PCDH12-201ENST00000231484 EXOC7Q9UPT5 735 aa12.7□□□□□ -0.38
PCDH12-201ENST00000231484 STAT2P52630 851 aa12.7□□□□□ -0.38
PCDH12-201ENST00000231484 GUCY1A3Q02108 690 aa12.7□□□□□ -0.38
PCDH12-201ENST00000231484 CCDC124Q96CT7 223 aaKnown RBP12.7□□□□□ -0.38
PCDH12-201ENST00000231484 SCYL1Q96KG9 808 aa12.7□□□□□ -0.38
PCDH12-201ENST00000231484 KCNF1Q9H3M0 494 aa12.7□□□□□ -0.38
PCDH12-201ENST00000231484 NOS1P29475 1434 aa12.7□□□□□ -0.38
PCDH12-201ENST00000231484 WDR46O15213 610 aaKnown RBP12.7□□□□□ -0.38
PCDH12-201ENST00000231484 IL1RL1Q01638 556 aa12.7□□□□□ -0.38
PCDH12-201ENST00000231484 HOOK2Q96ED9 719 aa12.7□□□□□ -0.38
PCDH12-201ENST00000231484 MYL10Q9BUA6 226 aa12.7□□□□□ -0.38
PCDH12-201ENST00000231484 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.7□□□□□ -0.38
PCDH12-201ENST00000231484 CTCFP49711 727 aaPredicted RBP12.7□□□□□ -0.38
PCDH12-201ENST00000231484 ART3Q13508 389 aa12.7□□□□□ -0.38
PCDH12-201ENST00000231484 SLC39A14Q15043 492 aa12.7□□□□□ -0.38
PCDH12-201ENST00000231484 COPS6Q7L5N1 327 aa12.7□□□□□ -0.38
PCDH12-201ENST00000231484 RCOR1Q9UKL0 485 aa12.7□□□□□ -0.38
PCDH12-201ENST00000231484 MAD1L1Q9Y6D9 718 aa12.7□□□□□ -0.38
PCDH12-201ENST00000231484 ANO9A1A5B4 782 aa12.69□□□□□ -0.38
PCDH12-201ENST00000231484 HAUS5O94927 633 aa12.69□□□□□ -0.38
PCDH12-201ENST00000231484 ESRRBO95718 433 aa12.69□□□□□ -0.38
PCDH12-201ENST00000231484 MDH1P40925 334 aaKnown RBP12.69□□□□□ -0.38
PCDH12-201ENST00000231484 MDM2Q00987 491 aaPredicted RBP12.69□□□□□ -0.38
PCDH12-201ENST00000231484 PPP2R5CQ13362 524 aa12.69□□□□□ -0.38
PCDH12-201ENST00000231484 NONOQ15233 471 aaKnown RBP eCLIP12.69□□□□□ -0.38
PCDH12-201ENST00000231484 GJC2Q5T442 439 aaPredicted RBP12.69□□□□□ -0.38
PCDH12-201ENST00000231484 CLEC17AQ6ZS10 378 aa12.69□□□□□ -0.38
PCDH12-201ENST00000231484 MIGA1Q8NAN2 632 aa12.69□□□□□ -0.38
PCDH12-201ENST00000231484 FAM210AQ96ND0 272 aa12.69□□□□□ -0.38
PCDH12-201ENST00000231484 FTOQ9C0B1 505 aaKnown RBP eCLIP12.69□□□□□ -0.38
PCDH12-201ENST00000231484 DMRT2Q9Y5R5 561 aa12.69□□□□□ -0.38
PCDH12-201ENST00000231484 EXOC3O60645 756 aa12.69□□□□□ -0.38
PCDH12-201ENST00000231484 GPC4O75487 556 aa12.69□□□□□ -0.38
PCDH12-201ENST00000231484 MBD4O95243 580 aa12.69□□□□□ -0.38
PCDH12-201ENST00000231484 GCNT3O95395 438 aa12.69□□□□□ -0.38
PCDH12-201ENST00000231484 SERPINB3P29508 390 aa12.69□□□□□ -0.38
PCDH12-201ENST00000231484 YWHAGP61981 247 aaKnown RBP eCLIP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms