RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 SLC12A7Q9Y666 1083 aa15.96■□□□□ 0.15
VEGFA-201ENST00000230480 KIAA1217Q5T5P2 1943 aa15.96■□□□□ 0.14
VEGFA-201ENST00000230480 ABCB11O95342 1321 aa15.95■□□□□ 0.14
VEGFA-201ENST00000230480 DNAH12Q6ZR08 3092 aa15.95■□□□□ 0.14
VEGFA-201ENST00000230480 CCDC69A6NI79 296 aa15.95■□□□□ 0.14
VEGFA-201ENST00000230480 ADAMTS3O15072 1205 aa15.95■□□□□ 0.14
VEGFA-201ENST00000230480 CASTP20810 708 aaKnown RBP15.95■□□□□ 0.14
VEGFA-201ENST00000230480 ADD1P35611 737 aaKnown RBP15.95■□□□□ 0.14
VEGFA-201ENST00000230480 ALDH5A1P51649 535 aaPredicted RBP15.95■□□□□ 0.14
VEGFA-201ENST00000230480 HSD17B4P51659 736 aa15.95■□□□□ 0.14
VEGFA-201ENST00000230480 ACVR2BQ13705 512 aa15.95■□□□□ 0.14
VEGFA-201ENST00000230480 NTRK3Q16288 839 aa15.95■□□□□ 0.14
VEGFA-201ENST00000230480 CCSAPQ6IQ19 270 aaPredicted RBP15.95■□□□□ 0.14
VEGFA-201ENST00000230480 BLOC1S2Q6QNY1 142 aa15.95■□□□□ 0.14
VEGFA-201ENST00000230480 RNF207Q6ZRF8 634 aa15.95■□□□□ 0.14
VEGFA-201ENST00000230480 RUFY3Q7L099 469 aa15.95■□□□□ 0.14
VEGFA-201ENST00000230480 MICU3Q86XE3 530 aa15.95■□□□□ 0.14
VEGFA-201ENST00000230480 HOMER1Q86YM7 354 aa15.95■□□□□ 0.14
VEGFA-201ENST00000230480 PIBF1Q8WXW3 757 aa15.95■□□□□ 0.14
VEGFA-201ENST00000230480 BRF1Q92994 677 aa15.95■□□□□ 0.14
VEGFA-201ENST00000230480 KIF2CQ99661 725 aa15.95■□□□□ 0.14
VEGFA-201ENST00000230480 LARP6Q9BRS8 491 aaKnown RBP15.95■□□□□ 0.14
VEGFA-201ENST00000230480 AMNQ9BXJ7 453 aa15.95■□□□□ 0.14
VEGFA-201ENST00000230480 UPF3BQ9BZI7 483 aaKnown RBP15.95■□□□□ 0.14
VEGFA-201ENST00000230480 PCDH10Q9P2E7 1040 aa15.95■□□□□ 0.14
VEGFA-201ENST00000230480 NID2Q14112 1375 aa15.95■□□□□ 0.14
VEGFA-201ENST00000230480 CNTNAP5Q8WYK1 1306 aa15.94■□□□□ 0.14
VEGFA-201ENST00000230480 KLF18A0A0U1RQI7 1052 aa15.94■□□□□ 0.14
VEGFA-201ENST00000230480 MYADML2A6NDP7 307 aa15.94■□□□□ 0.14
VEGFA-201ENST00000230480 ADAMTS4O75173 837 aa15.94■□□□□ 0.14
VEGFA-201ENST00000230480 FARP2O94887 1054 aaPredicted RBP15.94■□□□□ 0.14
VEGFA-201ENST00000230480 HMGB1P09429 215 aaKnown RBP15.94■□□□□ 0.14
VEGFA-201ENST00000230480 CALML3P27482 149 aa15.94■□□□□ 0.14
VEGFA-201ENST00000230480 PRPF38BQ5VTL8 546 aaKnown RBP15.94■□□□□ 0.14
VEGFA-201ENST00000230480 NFXL1Q6ZNB6 911 aa15.94■□□□□ 0.14
VEGFA-201ENST00000230480 PCDHA1Q9Y5I3 950 aa15.94■□□□□ 0.14
VEGFA-201ENST00000230480 RBM47A0AV96 593 aaKnown RBP15.93■□□□□ 0.14
VEGFA-201ENST00000230480 PTPDC1A2A3K4 754 aa15.93■□□□□ 0.14
VEGFA-201ENST00000230480 CNGA1P29973 690 aa15.93■□□□□ 0.14
VEGFA-201ENST00000230480 PDIA3P30101 505 aaKnown RBP15.93■□□□□ 0.14
VEGFA-201ENST00000230480 NKX3-2P78367 333 aa15.93■□□□□ 0.14
VEGFA-201ENST00000230480 CCDC144BQ3MJ40 725 aa15.93■□□□□ 0.14
VEGFA-201ENST00000230480 CCDC82Q8N4S0 544 aa15.93■□□□□ 0.14
VEGFA-201ENST00000230480 ANKLE1Q8NAG6 615 aa15.93■□□□□ 0.14
VEGFA-201ENST00000230480 KLHDC9Q8NEP7 349 aa15.93■□□□□ 0.14
VEGFA-201ENST00000230480 CTCFLQ8NI51 663 aaPredicted RBP15.93■□□□□ 0.14
VEGFA-201ENST00000230480 ABHD16BQ9H3Z7 469 aa15.93■□□□□ 0.14
VEGFA-201ENST00000230480 PNMA2Q9UL42 364 aa15.93■□□□□ 0.14
VEGFA-201ENST00000230480 GNEQ9Y223 722 aaKnown RBP15.93■□□□□ 0.14
VEGFA-201ENST00000230480 MEIS2O14770 477 aa15.92■□□□□ 0.14
VEGFA-201ENST00000230480 ZBTB43O43298 467 aa15.92■□□□□ 0.14
VEGFA-201ENST00000230480 DHX16O60231 1041 aaKnown RBP15.92■□□□□ 0.14
VEGFA-201ENST00000230480 RGS20O76081 388 aa15.92■□□□□ 0.14
VEGFA-201ENST00000230480 CALM1P0DP23 149 aa15.92■□□□□ 0.14
VEGFA-201ENST00000230480 CALM2P0DP24 149 aa15.92■□□□□ 0.14
VEGFA-201ENST00000230480 CALM3P0DP25 149 aa15.92■□□□□ 0.14
VEGFA-201ENST00000230480 SMPD1P17405 629 aa15.92■□□□□ 0.14
VEGFA-201ENST00000230480 HOXA13P31271 388 aaPredicted RBP15.92■□□□□ 0.14
VEGFA-201ENST00000230480 ADCYAP1R1P41586 468 aa15.92■□□□□ 0.14
VEGFA-201ENST00000230480 LRRC41Q15345 812 aa15.92■□□□□ 0.14
VEGFA-201ENST00000230480 PKN1Q16512 942 aa15.92■□□□□ 0.14
VEGFA-201ENST00000230480 GJC2Q5T442 439 aaPredicted RBP15.92■□□□□ 0.14
VEGFA-201ENST00000230480 EEPD1Q7L9B9 569 aa15.92■□□□□ 0.14
VEGFA-201ENST00000230480 FBXO16Q8IX29 292 aaPredicted RBP15.92■□□□□ 0.14
VEGFA-201ENST00000230480 IL31RAQ8NI17 732 aa15.92■□□□□ 0.14
VEGFA-201ENST00000230480 MAF1Q9H063 256 aa15.92■□□□□ 0.14
VEGFA-201ENST00000230480 MRPL11Q9Y3B7 192 aaKnown RBP15.92■□□□□ 0.14
VEGFA-201ENST00000230480 DTNBO60941 627 aa15.91■□□□□ 0.14
VEGFA-201ENST00000230480 PGK1P00558 417 aa15.91■□□□□ 0.14
VEGFA-201ENST00000230480 KIF5BP33176 963 aa15.91■□□□□ 0.14
VEGFA-201ENST00000230480 RCAN1P53805 252 aa15.91■□□□□ 0.14
VEGFA-201ENST00000230480 LZTS2Q9BRK4 669 aa15.91■□□□□ 0.14
VEGFA-201ENST00000230480 UPF3AQ9H1J1 476 aaKnown RBP15.91■□□□□ 0.14
VEGFA-201ENST00000230480 ZHX1Q9UKY1 873 aaPredicted RBP15.91■□□□□ 0.14
VEGFA-201ENST00000230480 MYH7BA7E2Y1 1941 aa15.9■□□□□ 0.14
VEGFA-201ENST00000230480 ASB14A6NK59 587 aa15.9■□□□□ 0.14
VEGFA-201ENST00000230480 ARIH2O95376 493 aa15.9■□□□□ 0.14
VEGFA-201ENST00000230480 CAPN2P17655 700 aa15.9■□□□□ 0.14
VEGFA-201ENST00000230480 PSMA5P28066 241 aa15.9■□□□□ 0.14
VEGFA-201ENST00000230480 GNAQP50148 359 aa15.9■□□□□ 0.14
VEGFA-201ENST00000230480 RTN1Q16799 776 aa15.9■□□□□ 0.14
VEGFA-201ENST00000230480 DNERQ8NFT8 737 aa15.9■□□□□ 0.14
VEGFA-201ENST00000230480 ALDH8A1Q9H2A2 487 aaPredicted RBP15.9■□□□□ 0.14
VEGFA-201ENST00000230480 NCOA5Q9HCD5 579 aaKnown RBP15.9■□□□□ 0.14
VEGFA-201ENST00000230480 CNPY2Q9Y2B0 182 aa15.9■□□□□ 0.14
VEGFA-201ENST00000230480 V9GY48 417 aaPredicted RBP15.9■□□□□ 0.14
VEGFA-201ENST00000230480 SYNRGQ9UMZ2 1314 aa15.9■□□□□ 0.14
VEGFA-201ENST00000230480 LOC102724159A0A0B4J2E5 919 aa15.89■□□□□ 0.13
VEGFA-201ENST00000230480 GOLGA8AA7E2F4 631 aa15.89■□□□□ 0.13
VEGFA-201ENST00000230480 GOLGA8BA8MQT2 603 aa15.89■□□□□ 0.13
VEGFA-201ENST00000230480 MSCO60682 206 aa15.89■□□□□ 0.13
VEGFA-201ENST00000230480 DUSP11O75319 330 aaKnown RBP15.89■□□□□ 0.13
VEGFA-201ENST00000230480 CFBP00751 764 aa15.89■□□□□ 0.13
VEGFA-201ENST00000230480 AKR1A1P14550 325 aa15.89■□□□□ 0.13
VEGFA-201ENST00000230480 GJA9P57773 515 aa15.89■□□□□ 0.13
VEGFA-201ENST00000230480 ANAPC15P60006 121 aa15.89■□□□□ 0.13
VEGFA-201ENST00000230480 PWP2Q15269 919 aaKnown RBP15.89■□□□□ 0.13
VEGFA-201ENST00000230480 WWC2Q6AWC2 1192 aa15.89■□□□□ 0.13
VEGFA-201ENST00000230480 CCDC62Q6P9F0 684 aa15.89■□□□□ 0.13
VEGFA-201ENST00000230480 USP17L6PQ6QN14 398 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms