RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 HYPKQ9NX55 129 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 MRPL42Q9Y6G3 142 aaKnown RBP6.31□□□□□ -1.4
RFX4-201ENST00000229387 GOLGA6L4A6NEF3 574 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 LRRIQ3A6PVS8 624 aaPredicted RBP6.31□□□□□ -1.4
RFX4-201ENST00000229387 NBPF26B4DH59 902 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 BUB1BO60566 1050 aaPredicted RBP6.31□□□□□ -1.4
RFX4-201ENST00000229387 GLRX3O76003 335 aaKnown RBP6.31□□□□□ -1.4
RFX4-201ENST00000229387 ATP6V1G2O95670 118 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 ZFYVE27Q5T4F4 411 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 NBPF14Q5TI25 921 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 THOC7Q6I9Y2 204 aaKnown RBP6.31□□□□□ -1.4
RFX4-201ENST00000229387 RUFY3Q7L099 469 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 METTL3Q86U44 580 aaKnown RBP6.31□□□□□ -1.4
RFX4-201ENST00000229387 SMC1BQ8NDV3 1235 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 TEKT4Q8WW24 435 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 TRAPPC9Q96Q05 1148 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 PUS3Q9BZE2 481 aaKnown RBP6.31□□□□□ -1.4
RFX4-201ENST00000229387 LSG1Q9H089 658 aaKnown RBP6.31□□□□□ -1.4
RFX4-201ENST00000229387 DDX19AQ9NUU7 478 aaKnown RBP6.31□□□□□ -1.4
RFX4-201ENST00000229387 ANO10Q9NW15 660 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 STAP2Q9UGK3 403 aa6.31□□□□□ -1.4
RFX4-201ENST00000229387 C1orf167Q5SNV9 1468 aa6.3□□□□□ -1.4
RFX4-201ENST00000229387 TARSL2A2RTX5 802 aaKnown RBP6.3□□□□□ -1.4
RFX4-201ENST00000229387 LRRD1A4D1F6 860 aa6.3□□□□□ -1.4
RFX4-201ENST00000229387 DNAJC8O75937 253 aaPredicted RBP6.3□□□□□ -1.4
RFX4-201ENST00000229387 SNRPA1P09661 255 aaKnown RBP6.3□□□□□ -1.4
RFX4-201ENST00000229387 TCF7P36402 384 aaPredicted RBP6.3□□□□□ -1.4
RFX4-201ENST00000229387 KCNQ4P56696 695 aa6.3□□□□□ -1.4
RFX4-201ENST00000229387 CHMP4BP1P59074 171 aa6.3□□□□□ -1.4
RFX4-201ENST00000229387 CEBPZQ03701 1054 aaKnown RBP6.3□□□□□ -1.4
RFX4-201ENST00000229387 PTPROQ16827 1216 aa6.3□□□□□ -1.4
RFX4-201ENST00000229387 LRRC24Q50LG9 513 aa6.3□□□□□ -1.4
RFX4-201ENST00000229387 LDLRAD1Q5T700 205 aa6.3□□□□□ -1.4
RFX4-201ENST00000229387 PPP2R2DQ66LE6 453 aa6.3□□□□□ -1.4
RFX4-201ENST00000229387 SMIM5Q71RC9 77 aa6.3□□□□□ -1.4
RFX4-201ENST00000229387 BRINP3Q76B58 766 aa6.3□□□□□ -1.4
RFX4-201ENST00000229387 STK11IPQ8N1F8 1099 aa6.3□□□□□ -1.4
RFX4-201ENST00000229387 CCDC155Q8N6L0 562 aa6.3□□□□□ -1.4
RFX4-201ENST00000229387 FAM89AQ96GI7 184 aa6.3□□□□□ -1.4
RFX4-201ENST00000229387 L3MBTL3Q96JM7 780 aaPredicted RBP6.3□□□□□ -1.4
RFX4-201ENST00000229387 NAP1L3Q99457 506 aaPredicted RBP6.3□□□□□ -1.4
RFX4-201ENST00000229387 BHMT2Q9H2M3 363 aa6.3□□□□□ -1.4
RFX4-201ENST00000229387 GOLPH3LQ9H4A5 285 aa6.3□□□□□ -1.4
RFX4-201ENST00000229387 NOD2Q9HC29 1040 aa6.3□□□□□ -1.4
RFX4-201ENST00000229387 PREBQ9HCU5 417 aa6.3□□□□□ -1.4
RFX4-201ENST00000229387 NOVA2Q9UNW9 492 aaKnown RBP6.3□□□□□ -1.4
RFX4-201ENST00000229387 SNAP23O00161 211 aa6.3□□□□□ -1.4
RFX4-201ENST00000229387 TRIM37O94972 964 aa6.3□□□□□ -1.4
RFX4-201ENST00000229387 ANP32DO95626 131 aa6.3□□□□□ -1.4
RFX4-201ENST00000229387 TROVE2P10155 538 aaKnown RBP eCLIP6.3□□□□□ -1.4
RFX4-201ENST00000229387 MYCLP1P12525 358 aaPredicted RBP6.3□□□□□ -1.4
RFX4-201ENST00000229387 HSPA4P34932 840 aa6.3□□□□□ -1.4
RFX4-201ENST00000229387 RCN1Q15293 331 aa6.3□□□□□ -1.4
RFX4-201ENST00000229387 NSUN7Q8NE18 718 aaKnown RBP6.3□□□□□ -1.4
RFX4-201ENST00000229387 KIFC2Q96AC6 838 aa6.3□□□□□ -1.4
RFX4-201ENST00000229387 OSBPL10Q9BXB5 764 aa6.3□□□□□ -1.4
RFX4-201ENST00000229387 NOP53Q9NZM5 478 aaKnown RBP6.3□□□□□ -1.4
RFX4-201ENST00000229387 DBNLQ9UJU6 430 aaKnown RBP6.3□□□□□ -1.4
RFX4-201ENST00000229387 ASAP1Q9ULH1 1129 aa6.3□□□□□ -1.4
RFX4-201ENST00000229387 C2CD2Q9Y426 696 aa6.3□□□□□ -1.4
RFX4-201ENST00000229387 ATP6V0A2Q9Y487 856 aa6.3□□□□□ -1.4
RFX4-201ENST00000229387 DAAM1Q9Y4D1 1078 aa6.3□□□□□ -1.4
RFX4-201ENST00000229387 RBM8AQ9Y5S9 174 aaKnown RBP6.3□□□□□ -1.4
RFX4-201ENST00000229387 UBN2Q6ZU65 1347 aa6.3□□□□□ -1.4
RFX4-201ENST00000229387 MEGF6O75095 1541 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 TMEM247A6NEH6 219 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 NDUFAB1O14561 156 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 P4HA2O15460 535 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 KDM1AO60341 852 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 PHACTR2O75167 634 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 ADAMTS2O95450 1211 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 MSL3P1P0C860 447 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 CA8P35219 290 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 HOXD12P35452 270 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 NLRP5P59047 1200 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 MRPS35P82673 323 aaKnown RBP6.29□□□□□ -1.4
RFX4-201ENST00000229387 FKBP4Q02790 459 aaKnown RBP eCLIP6.29□□□□□ -1.4
RFX4-201ENST00000229387 CAMK4Q16566 473 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 FXNQ16595 210 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 PARP10Q53GL7 1025 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 PI16Q6UXB8 463 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 USP33Q8TEY7 942 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 LRRN4Q8WUT4 740 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 PNKPQ96T60 521 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 SEZ6LQ9BYH1 1024 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 UBAP1Q9NZ09 502 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 HPCAL4Q9UM19 191 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 KAT6BQ8WYB5 2073 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 BECN2A8MW95 431 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 WDR46O15213 610 aaKnown RBP6.29□□□□□ -1.4
RFX4-201ENST00000229387 CUTAO60888 179 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 MTRF1O75570 445 aaKnown RBP6.29□□□□□ -1.4
RFX4-201ENST00000229387 SH3BGRP55822 239 aaPredicted RBP6.29□□□□□ -1.4
RFX4-201ENST00000229387 ARPC4P59998 168 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 LMNB2Q03252 620 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 CTDSPL2Q05D32 466 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 SULT2A1Q06520 285 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 MYO1EQ12965 1108 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 SDE2Q6IQ49 451 aa6.29□□□□□ -1.4
RFX4-201ENST00000229387 HOOK3Q86VS8 718 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms