RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 TARSL2A2RTX5 802 aaKnown RBP16.04■□□□□ 0.16
PRDM4-201ENST00000228437 LRRC53A6NM62 1247 aa16.04■□□□□ 0.16
PRDM4-201ENST00000228437 ENO4A6NNW6 628 aa16.04■□□□□ 0.16
PRDM4-201ENST00000228437 KRIT1O00522 736 aa16.04■□□□□ 0.16
PRDM4-201ENST00000228437 MYBL1P10243 752 aa16.04■□□□□ 0.16
PRDM4-201ENST00000228437 MAGOHP61326 146 aaKnown RBP16.04■□□□□ 0.16
PRDM4-201ENST00000228437 NTRK3Q16288 839 aa16.04■□□□□ 0.16
PRDM4-201ENST00000228437 DNAAF5Q86Y56 855 aa16.04■□□□□ 0.16
PRDM4-201ENST00000228437 FMNL3Q8IVF7 1028 aa16.04■□□□□ 0.16
PRDM4-201ENST00000228437 MAGOHBQ96A72 148 aaKnown RBP16.04■□□□□ 0.16
PRDM4-201ENST00000228437 NBPF26B4DH59 902 aa16.04■□□□□ 0.16
PRDM4-201ENST00000228437 NEFHP12036 1026 aa16.04■□□□□ 0.16
PRDM4-201ENST00000228437 EEF1GP26641 437 aaKnown RBP16.04■□□□□ 0.16
PRDM4-201ENST00000228437 PMS1P54277 932 aaKnown RBP16.04■□□□□ 0.16
PRDM4-201ENST00000228437 UBE3CQ15386 1083 aa16.04■□□□□ 0.16
PRDM4-201ENST00000228437 ZKSCAN8Q15776 578 aaPredicted RBP16.04■□□□□ 0.16
PRDM4-201ENST00000228437 NBPF10Q6P3W6 841 aaKnown RBP16.04■□□□□ 0.16
PRDM4-201ENST00000228437 NBPF15Q8N660 670 aa16.04■□□□□ 0.16
PRDM4-201ENST00000228437 ZNF579Q8NAF0 562 aaKnown RBP16.04■□□□□ 0.16
PRDM4-201ENST00000228437 P2RX5Q93086 422 aa16.04■□□□□ 0.16
PRDM4-201ENST00000228437 ZSCAN10Q96SZ4 725 aaPredicted RBP16.04■□□□□ 0.16
PRDM4-201ENST00000228437 EPN3Q9H201 632 aa16.04■□□□□ 0.16
PRDM4-201ENST00000228437 MLXIPLQ9NP71 852 aa16.04■□□□□ 0.16
PRDM4-201ENST00000228437 DYNLL1P63167 89 aaKnown RBP16.04■□□□□ 0.16
PRDM4-201ENST00000228437 NAIF1Q69YI7 327 aaPredicted RBP16.04■□□□□ 0.16
PRDM4-201ENST00000228437 KCNV2Q8TDN2 545 aa16.04■□□□□ 0.16
PRDM4-201ENST00000228437 PPP1R12CQ9BZL4 782 aa16.04■□□□□ 0.16
PRDM4-201ENST00000228437 DDX47Q9H0S4 455 aaKnown RBP16.04■□□□□ 0.16
PRDM4-201ENST00000228437 CPDO75976 1380 aa16.03■□□□□ 0.16
PRDM4-201ENST00000228437 CEMIPQ8WUJ3 1361 aa16.03■□□□□ 0.16
PRDM4-201ENST00000228437 SLC1A4P43007 532 aa16.03■□□□□ 0.16
PRDM4-201ENST00000228437 SARSP49591 514 aaKnown RBP16.03■□□□□ 0.16
PRDM4-201ENST00000228437 CACNB1Q02641 598 aaPredicted RBP16.03■□□□□ 0.16
PRDM4-201ENST00000228437 DHX9Q08211 1270 aaKnown RBP16.03■□□□□ 0.16
PRDM4-201ENST00000228437 SFMBT2Q5VUG0 894 aa16.03■□□□□ 0.16
PRDM4-201ENST00000228437 CTNNBL1Q8WYA6 563 aaPredicted RBP16.03■□□□□ 0.16
PRDM4-201ENST00000228437 MCM9Q9NXL9 1143 aa16.03■□□□□ 0.16
PRDM4-201ENST00000228437 REXO2Q9Y3B8 237 aaKnown RBP16.03■□□□□ 0.16
PRDM4-201ENST00000228437 XDHP47989 1333 aa16.03■□□□□ 0.16
PRDM4-201ENST00000228437 HECW2Q9P2P5 1572 aa16.03■□□□□ 0.16
PRDM4-201ENST00000228437 GSTTP1A0A1W2PQM5 241 aa16.03■□□□□ 0.16
PRDM4-201ENST00000228437 ABCB4P21439 1286 aa16.03■□□□□ 0.16
PRDM4-201ENST00000228437 MDH1P40925 334 aaKnown RBP16.03■□□□□ 0.16
PRDM4-201ENST00000228437 TTMPQ5BVD1 217 aa16.03■□□□□ 0.16
PRDM4-201ENST00000228437 CDKAL1Q5VV42 579 aa16.03■□□□□ 0.16
PRDM4-201ENST00000228437 CCDC155Q8N6L0 562 aa16.03■□□□□ 0.16
PRDM4-201ENST00000228437 MRRFQ96E11 262 aaKnown RBP16.03■□□□□ 0.16
PRDM4-201ENST00000228437 ELAC2Q9BQ52 826 aaKnown RBP16.03■□□□□ 0.16
PRDM4-201ENST00000228437 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.03■□□□□ 0.162e-6■■■■■ 96.1
PRDM4-201ENST00000228437 PRPF6O94906 941 aaKnown RBP16.03■□□□□ 0.16
PRDM4-201ENST00000228437 ZNF444Q8N0Y2 327 aaPredicted RBP16.03■□□□□ 0.16
PRDM4-201ENST00000228437 MDM1Q8TC05 714 aa16.03■□□□□ 0.16
PRDM4-201ENST00000228437 SPDL1Q96EA4 605 aa16.03■□□□□ 0.16
PRDM4-201ENST00000228437 LBHD1Q9BQE6 289 aaPredicted RBP16.03■□□□□ 0.16
PRDM4-201ENST00000228437 RNF26Q9BY78 433 aaPredicted RBP16.03■□□□□ 0.16
PRDM4-201ENST00000228437 CAPN11Q9UMQ6 739 aa16.03■□□□□ 0.16
PRDM4-201ENST00000228437 DLC1Q96QB1 1528 aa16.03■□□□□ 0.16
PRDM4-201ENST00000228437 TSPOAP1O95153 1857 aa16.02■□□□□ 0.16
PRDM4-201ENST00000228437 SMIM22K7EJ46 135 aa16.02■□□□□ 0.16
PRDM4-201ENST00000228437 SEMA3EO15041 775 aa16.02■□□□□ 0.16
PRDM4-201ENST00000228437 RPS6KA5O75582 802 aa16.02■□□□□ 0.16
PRDM4-201ENST00000228437 SV2BQ7L1I2 683 aa16.02■□□□□ 0.16
PRDM4-201ENST00000228437 ATP6V1G3Q96LB4 118 aa16.02■□□□□ 0.16
PRDM4-201ENST00000228437 YIPF3Q9GZM5 350 aa16.02■□□□□ 0.16
PRDM4-201ENST00000228437 SEC63Q9UGP8 760 aaKnown RBP16.02■□□□□ 0.16
PRDM4-201ENST00000228437 GMNCA6NCL1 334 aa16.02■□□□□ 0.16
PRDM4-201ENST00000228437 SCG2P13521 617 aa16.02■□□□□ 0.16
PRDM4-201ENST00000228437 CALML3P27482 149 aa16.02■□□□□ 0.16
PRDM4-201ENST00000228437 PCK1P35558 622 aa16.02■□□□□ 0.16
PRDM4-201ENST00000228437 PEX26Q7Z412 305 aa16.02■□□□□ 0.16
PRDM4-201ENST00000228437 SPATS2Q86XZ4 545 aaKnown RBP16.02■□□□□ 0.16
PRDM4-201ENST00000228437 BLIDQ8IZY5 108 aa16.02■□□□□ 0.16
PRDM4-201ENST00000228437 MYCBPAPQ8TBZ2 947 aa16.02■□□□□ 0.16
PRDM4-201ENST00000228437 HVCN1Q96D96 273 aa16.02■□□□□ 0.16
PRDM4-201ENST00000228437 FAM217BQ9NTX9 383 aaPredicted RBP16.02■□□□□ 0.16
PRDM4-201ENST00000228437 TBX22Q9Y458 520 aa16.02■□□□□ 0.16
PRDM4-201ENST00000228437 GLI1P08151 1106 aa16.02■□□□□ 0.15
PRDM4-201ENST00000228437 ZCRB1Q8TBF4 217 aaKnown RBP16.02■□□□□ 0.15
PRDM4-201ENST00000228437 UTYO14607 1347 aa16.02■□□□□ 0.15
PRDM4-201ENST00000228437 ANKARQ7Z5J8 1434 aa16.02■□□□□ 0.15
PRDM4-201ENST00000228437 AGPSO00116 658 aa16.02■□□□□ 0.15
PRDM4-201ENST00000228437 PDE8BO95263 885 aa16.02■□□□□ 0.15
PRDM4-201ENST00000228437 PUM3Q15397 648 aaKnown RBP16.02■□□□□ 0.15
PRDM4-201ENST00000228437 VPS36Q86VN1 386 aa16.02■□□□□ 0.15
PRDM4-201ENST00000228437 FAM133AQ8N9E0 248 aa16.02■□□□□ 0.15
PRDM4-201ENST00000228437 WNT7AO00755 349 aa16.01■□□□□ 0.15
PRDM4-201ENST00000228437 AMPD2Q01433 879 aa16.01■□□□□ 0.15
PRDM4-201ENST00000228437 ANO9A1A5B4 782 aa16.01■□□□□ 0.15
PRDM4-201ENST00000228437 PLCG1P19174 1290 aa16.01■□□□□ 0.15
PRDM4-201ENST00000228437 ARID4AP29374 1257 aaPredicted RBP16.01■□□□□ 0.15
PRDM4-201ENST00000228437 TNNI2P48788 182 aa16.01■□□□□ 0.15
PRDM4-201ENST00000228437 RASGRF1Q13972 1273 aa16.01■□□□□ 0.15
PRDM4-201ENST00000228437 PTGISQ16647 500 aa16.01■□□□□ 0.15
PRDM4-201ENST00000228437 ANKRD40Q6AI12 368 aa16.01■□□□□ 0.15
PRDM4-201ENST00000228437 TTLL11Q8NHH1 800 aa16.01■□□□□ 0.15
PRDM4-201ENST00000228437 CYFIP2Q96F07 1278 aa16.01■□□□□ 0.15
PRDM4-201ENST00000228437 NDST4Q9H3R1 872 aa16.01■□□□□ 0.15
PRDM4-201ENST00000228437 EPB41L4AQ9HCS5 686 aaPredicted RBP16.01■□□□□ 0.15
PRDM4-201ENST00000228437 GYG1P46976 350 aa16.01■□□□□ 0.15
PRDM4-201ENST00000228437 AARSP49588 968 aaKnown RBP eCLIP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms