RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 PRPF3O43395 683 aaKnown RBP15.15■□□□□ 0.02
NFKB1-201ENST00000226574 RPSAP08865 295 aaKnown RBP15.15■□□□□ 0.02
NFKB1-201ENST00000226574 XRCC5P13010 732 aaKnown RBP15.15■□□□□ 0.02
NFKB1-201ENST00000226574 PLCG2P16885 1265 aa15.15■□□□□ 0.02
NFKB1-201ENST00000226574 SLCO1A2P46721 670 aa15.15■□□□□ 0.02
NFKB1-201ENST00000226574 UAP1Q16222 522 aaPredicted RBP15.15■□□□□ 0.02
NFKB1-201ENST00000226574 DPP8Q6V1X1 898 aaPredicted RBP15.15■□□□□ 0.02
NFKB1-201ENST00000226574 RUFY4Q6ZNE9 571 aa15.15■□□□□ 0.02
NFKB1-201ENST00000226574 CPXCR1Q8N123 301 aa15.15■□□□□ 0.02
NFKB1-201ENST00000226574 MMS19Q96T76 1030 aa15.15■□□□□ 0.02
NFKB1-201ENST00000226574 AGPAT5Q9NUQ2 364 aa15.15■□□□□ 0.02
NFKB1-201ENST00000226574 NRKQ7Z2Y5 1582 aa15.15■□□□□ 0.02
NFKB1-201ENST00000226574 SETBP1Q9Y6X0 1596 aa15.15■□□□□ 0.02
NFKB1-201ENST00000226574 PPP1R2P41236 205 aa15.14■□□□□ 0.01
NFKB1-201ENST00000226574 UBXN2AP68543 259 aa15.14■□□□□ 0.01
NFKB1-201ENST00000226574 TMC4Q7Z404 712 aa15.14■□□□□ 0.01
NFKB1-201ENST00000226574 TAB3Q8N5C8 712 aaPredicted RBP15.14■□□□□ 0.01
NFKB1-201ENST00000226574 LARP4BQ92615 738 aaKnown RBP15.14■□□□□ 0.01
NFKB1-201ENST00000226574 NDST4Q9H3R1 872 aa15.14■□□□□ 0.01
NFKB1-201ENST00000226574 PCDHA4Q9UN74 947 aa15.14■□□□□ 0.01
NFKB1-201ENST00000226574 POTEMA6NI47 508 aa15.14■□□□□ 0.01
NFKB1-201ENST00000226574 CCDC169A6NNP5 214 aa15.14■□□□□ 0.01
NFKB1-201ENST00000226574 MAP2K2P36507 400 aa15.14■□□□□ 0.01
NFKB1-201ENST00000226574 UBE2SQ16763 222 aa15.14■□□□□ 0.01
NFKB1-201ENST00000226574 FOXP4Q8IVH2 680 aaPredicted RBP15.14■□□□□ 0.01
NFKB1-201ENST00000226574 PLVAPQ9BX97 442 aa15.14■□□□□ 0.01
NFKB1-201ENST00000226574 NSRP1Q9H0G5 558 aaKnown RBP15.14■□□□□ 0.01
NFKB1-201ENST00000226574 USTQ9Y2C2 406 aa15.14■□□□□ 0.01
NFKB1-201ENST00000226574 ATP8A1Q9Y2Q0 1164 aa15.14■□□□□ 0.01
NFKB1-201ENST00000226574 FCER1AP12319 257 aa15.14■□□□□ 0.01
NFKB1-201ENST00000226574 CCNE1P24864 410 aa15.14■□□□□ 0.01
NFKB1-201ENST00000226574 MECOMQ03112 1051 aa15.14■□□□□ 0.01
NFKB1-201ENST00000226574 RBM26Q5T8P6 1007 aaKnown RBP15.14■□□□□ 0.01
NFKB1-201ENST00000226574 PSTPIP2Q9H939 334 aa15.14■□□□□ 0.01
NFKB1-201ENST00000226574 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.14■□□□□ 0.01
NFKB1-201ENST00000226574 TUBE1Q9UJT0 475 aa15.14■□□□□ 0.01
NFKB1-201ENST00000226574 USP31Q70CQ4 1352 aa15.14■□□□□ 0.01
NFKB1-201ENST00000226574 PCDHA13Q9Y5I0 950 aa15.13■□□□□ 0.01
NFKB1-201ENST00000226574 TMEM94Q12767 1356 aa15.13■□□□□ 0.01
NFKB1-201ENST00000226574 LRRN2O75325 713 aa15.13■□□□□ 0.01
NFKB1-201ENST00000226574 DDAH1O94760 285 aa15.13■□□□□ 0.01
NFKB1-201ENST00000226574 STAT1P42224 750 aa15.13■□□□□ 0.01
NFKB1-201ENST00000226574 KCTD1Q719H9 257 aa15.13■□□□□ 0.01
NFKB1-201ENST00000226574 SH2D3CQ8N5H7 860 aa15.13■□□□□ 0.01
NFKB1-201ENST00000226574 FHOD1Q9Y613 1164 aa15.13■□□□□ 0.01
NFKB1-201ENST00000226574 COL3A1P02461 1466 aaPredicted RBP15.13■□□□□ 0.01
NFKB1-201ENST00000226574 NR2F2P24468 414 aa15.13■□□□□ 0.01
NFKB1-201ENST00000226574 CCNL1Q9UK58 526 aaPredicted RBP15.13■□□□□ 0.01
NFKB1-201ENST00000226574 TSPOAP1O95153 1857 aa15.13■□□□□ 0.01
NFKB1-201ENST00000226574 ACTN4O43707 911 aaKnown RBP15.12■□□□□ 0.01
NFKB1-201ENST00000226574 H2AFZP0C0S5 128 aa15.12■□□□□ 0.01
NFKB1-201ENST00000226574 BTDP43251 543 aa15.12■□□□□ 0.01
NFKB1-201ENST00000226574 CLNS1AP54105 237 aaKnown RBP15.12■□□□□ 0.01
NFKB1-201ENST00000226574 GFPT1Q06210 699 aaPredicted RBP15.12■□□□□ 0.01
NFKB1-201ENST00000226574 TMTC3Q6ZXV5 915 aa15.12■□□□□ 0.01
NFKB1-201ENST00000226574 H2AFVQ71UI9 128 aa15.12■□□□□ 0.01
NFKB1-201ENST00000226574 STAG2Q8N3U4 1231 aa15.12■□□□□ 0.01
NFKB1-201ENST00000226574 JPH2Q9BR39 696 aaPredicted RBP15.12■□□□□ 0.01
NFKB1-201ENST00000226574 HOMER2Q9NSB8 354 aa15.12■□□□□ 0.01
NFKB1-201ENST00000226574 PTPN22Q9Y2R2 807 aa15.12■□□□□ 0.01
NFKB1-201ENST00000226574 RIPOR2Q9Y4F9 1068 aa15.12■□□□□ 0.01
NFKB1-201ENST00000226574 CD163L1Q9NR16 1453 aa15.12■□□□□ 0.01
NFKB1-201ENST00000226574 SFI1A8K8P3 1242 aa15.12■□□□□ 0.01
NFKB1-201ENST00000226574 TBC1D8O95759 1140 aa15.12■□□□□ 0.01
NFKB1-201ENST00000226574 NCAPHQ15003 741 aa15.12■□□□□ 0.01
NFKB1-201ENST00000226574 VWA3BQ502W6 1294 aa15.12■□□□□ 0.01
NFKB1-201ENST00000226574 SEL1L2Q5TEA6 688 aa15.12■□□□□ 0.01
NFKB1-201ENST00000226574 SPICE1Q8N0Z3 855 aa15.12■□□□□ 0.01
NFKB1-201ENST00000226574 MTUS1Q9ULD2 1270 aa15.12■□□□□ 0.01
NFKB1-201ENST00000226574 ARHGAP25P42331 645 aa15.12■□□□□ 0.01
NFKB1-201ENST00000226574 TXNRD1Q16881 649 aa15.12■□□□□ 0.01
NFKB1-201ENST00000226574 CCDC77Q9BR77 488 aa15.12■□□□□ 0.01
NFKB1-201ENST00000226574 ECM2O94769 699 aaPredicted RBP15.12■□□□□ 0.01
NFKB1-201ENST00000226574 CCDC127Q96BQ5 260 aa15.12■□□□□ 0.01
NFKB1-201ENST00000226574 DDX25Q9UHL0 483 aaKnown RBP15.12■□□□□ 0.01
NFKB1-201ENST00000226574 AMFRQ9UKV5 643 aa15.12■□□□□ 0.01
NFKB1-201ENST00000226574 CD2APQ9Y5K6 639 aa15.12■□□□□ 0.01
NFKB1-201ENST00000226574 OVOS2A0A0J9YW53 1432 aa15.11■□□□□ 0.01
NFKB1-201ENST00000226574 OVOS2Q6IE36 1432 aa15.11■□□□□ 0.01
NFKB1-201ENST00000226574 RGS16O15492 202 aaPredicted RBP15.11■□□□□ 0.01
NFKB1-201ENST00000226574 PLTPP55058 493 aa15.11■□□□□ 0.01
NFKB1-201ENST00000226574 BIRC3Q13489 604 aa15.11■□□□□ 0.01
NFKB1-201ENST00000226574 DOK7Q18PE1 504 aa15.11■□□□□ 0.01
NFKB1-201ENST00000226574 HAUS3Q68CZ6 603 aa15.11■□□□□ 0.01
NFKB1-201ENST00000226574 RBM43Q6ZSC3 357 aaKnown RBP15.11■□□□□ 0.01
NFKB1-201ENST00000226574 CCDC170Q8IYT3 715 aa15.11■□□□□ 0.01
NFKB1-201ENST00000226574 DHTKD1Q96HY7 919 aaPredicted RBP15.11■□□□□ 0.01
NFKB1-201ENST00000226574 PNKPQ96T60 521 aa15.11■□□□□ 0.01
NFKB1-201ENST00000226574 DNAJC17Q9NVM6 304 aaKnown RBP15.11■□□□□ 0.01
NFKB1-201ENST00000226574 ADD3Q9UEY8 706 aaKnown RBP15.11■□□□□ 0.01
NFKB1-201ENST00000226574 GGA1Q9UJY5 639 aa15.11■□□□□ 0.01
NFKB1-201ENST00000226574 IKBKGQ9Y6K9 419 aa15.11■□□□□ 0.01
NFKB1-201ENST00000226574 PPFIA4O75335 1185 aa15.11■□□□□ 0.01
NFKB1-201ENST00000226574 GYPCP04921 128 aa15.11■□□□□ 0.01
NFKB1-201ENST00000226574 TRAPPC3LQ5T215 181 aa15.11■□□□□ 0.01
NFKB1-201ENST00000226574 ILDR1Q86SU0 546 aaPredicted RBP15.11■□□□□ 0.01
NFKB1-201ENST00000226574 CACNA2D3Q8IZS8 1091 aa15.11■□□□□ 0.01
NFKB1-201ENST00000226574 TCP11Q8WWU5 503 aa15.11■□□□□ 0.01
NFKB1-201ENST00000226574 KCNB2Q92953 911 aa15.11■□□□□ 0.01
NFKB1-201ENST00000226574 L2HGDHQ9H9P8 463 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms