RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 FBXO16Q8IX29 292 aaPredicted RBP21.03■□□□□ 0.96
PFN1-201ENST00000225655 PNMA1Q8ND90 353 aa21.03■□□□□ 0.96
PFN1-201ENST00000225655 ZSCAN10Q96SZ4 725 aaPredicted RBP21.03■□□□□ 0.96
PFN1-201ENST00000225655 PDGFCQ9NRA1 345 aa21.03■□□□□ 0.96
PFN1-201ENST00000225655 ZSWIM5Q9P217 1185 aa21.03■□□□□ 0.96
PFN1-201ENST00000225655 Q9Y3F1 56 aa21.03■□□□□ 0.96
PFN1-201ENST00000225655 RBM8AQ9Y5S9 174 aaKnown RBP21.03■□□□□ 0.96
PFN1-201ENST00000225655 PTPDC1A2A3K4 754 aa21.02■□□□□ 0.96
PFN1-201ENST00000225655 ARVCFO00192 962 aa21.02■□□□□ 0.96
PFN1-201ENST00000225655 ALDH5A1P51649 535 aaPredicted RBP21.02■□□□□ 0.96
PFN1-201ENST00000225655 BEX3Q00994 111 aa21.02■□□□□ 0.96
PFN1-201ENST00000225655 EEPD1Q7L9B9 569 aa21.02■□□□□ 0.96
PFN1-201ENST00000225655 VTI1AQ96AJ9 217 aa21.02■□□□□ 0.96
PFN1-201ENST00000225655 KRT23Q9C075 422 aa21.02■□□□□ 0.96
PFN1-201ENST00000225655 AP5M1Q9H0R1 490 aa21.02■□□□□ 0.96
PFN1-201ENST00000225655 KAT14Q9H8E8 782 aa21.02■□□□□ 0.96
PFN1-201ENST00000225655 CNNM2Q9H8M5 875 aa21.02■□□□□ 0.96
PFN1-201ENST00000225655 TBX21Q9UL17 535 aa21.02■□□□□ 0.96
PFN1-201ENST00000225655 CABYRO75952 493 aa21.01■□□□□ 0.95
PFN1-201ENST00000225655 GOLGA8HP0CJ92 632 aa21.01■□□□□ 0.95
PFN1-201ENST00000225655 FPGSQ05932 587 aa21.01■□□□□ 0.95
PFN1-201ENST00000225655 FSCN1Q16658 493 aaKnown RBP21.01■□□□□ 0.95
PFN1-201ENST00000225655 SLC30A10Q6XR72 485 aa21.01■□□□□ 0.95
PFN1-201ENST00000225655 RNF207Q6ZRF8 634 aa21.01■□□□□ 0.95
PFN1-201ENST00000225655 ENAHQ8N8S7 591 aaPredicted RBP21.01■□□□□ 0.95
PFN1-201ENST00000225655 DYNC1LI2O43237 492 aaPredicted RBP21■□□□□ 0.95
PFN1-201ENST00000225655 TIMP1P01033 207 aa21■□□□□ 0.95
PFN1-201ENST00000225655 TRDNQ13061 729 aa21■□□□□ 0.95
PFN1-201ENST00000225655 FAM126BQ8IXS8 530 aa21■□□□□ 0.95
PFN1-201ENST00000225655 STXBP5LQ9Y2K9 1186 aa21■□□□□ 0.95
PFN1-201ENST00000225655 TNKSO95271 1327 aa21■□□□□ 0.95
PFN1-201ENST00000225655 ZEB2O60315 1214 aa20.99■□□□□ 0.95
PFN1-201ENST00000225655 CALML3P27482 149 aa20.99■□□□□ 0.95
PFN1-201ENST00000225655 EPHB4P54760 987 aa20.99■□□□□ 0.95
PFN1-201ENST00000225655 RPS6P62753 249 aaKnown RBP20.99■□□□□ 0.95
PFN1-201ENST00000225655 DUSP28Q4G0W2 176 aa20.99■□□□□ 0.95
PFN1-201ENST00000225655 ASPRV1Q53RT3 343 aa20.99■□□□□ 0.95
PFN1-201ENST00000225655 CXCL17Q6UXB2 119 aa20.99■□□□□ 0.95
PFN1-201ENST00000225655 RGS22Q8NE09 1264 aa20.99■□□□□ 0.95
PFN1-201ENST00000225655 UBAC1Q9BSL1 405 aa20.99■□□□□ 0.95
PFN1-201ENST00000225655 UBA5Q9GZZ9 404 aa20.99■□□□□ 0.95
PFN1-201ENST00000225655 PTGS1P23219 599 aa20.98■□□□□ 0.95
PFN1-201ENST00000225655 SMAD3P84022 425 aaKnown RBP20.98■□□□□ 0.95
PFN1-201ENST00000225655 CDC37Q16543 378 aaPredicted RBP20.98■□□□□ 0.95
PFN1-201ENST00000225655 TMEM63BQ5T3F8 832 aa20.98■□□□□ 0.95
PFN1-201ENST00000225655 SLC43A3Q8NBI5 491 aa20.98■□□□□ 0.95
PFN1-201ENST00000225655 DNERQ8NFT8 737 aa20.98■□□□□ 0.95
PFN1-201ENST00000225655 MPHOSPH6Q99547 160 aaKnown RBP20.98■□□□□ 0.95
PFN1-201ENST00000225655 SEZ6LQ9BYH1 1024 aa20.98■□□□□ 0.95
PFN1-201ENST00000225655 MAF1Q9H063 256 aa20.98■□□□□ 0.95
PFN1-201ENST00000225655 CPVLQ9H3G5 476 aa20.98■□□□□ 0.95
PFN1-201ENST00000225655 RBM47A0AV96 593 aaKnown RBP20.97■□□□□ 0.95
PFN1-201ENST00000225655 TLR3O15455 904 aaKnown RBP20.97■□□□□ 0.95
PFN1-201ENST00000225655 CD4P01730 458 aa20.97■□□□□ 0.95
PFN1-201ENST00000225655 EDNRBP24530 442 aa20.97■□□□□ 0.95
PFN1-201ENST00000225655 USH1GQ495M9 461 aa20.97■□□□□ 0.95
PFN1-201ENST00000225655 MFSD5Q6N075 450 aa20.97■□□□□ 0.95
PFN1-201ENST00000225655 RALYLQ86SE5 291 aaKnown RBP20.97■□□□□ 0.95
PFN1-201ENST00000225655 ADGRF4Q8IZF3 695 aa20.97■□□□□ 0.95
PFN1-201ENST00000225655 RNPC3Q96LT9 517 aaKnown RBP20.97■□□□□ 0.95
PFN1-201ENST00000225655 WDR11Q9BZH6 1224 aa20.97■□□□□ 0.95
PFN1-201ENST00000225655 MYH6P13533 1939 aa20.97■□□□□ 0.95
PFN1-201ENST00000225655 CYP21A2P08686 494 aa20.96■□□□□ 0.95
PFN1-201ENST00000225655 PARP1P09874 1014 aaKnown RBP20.96■□□□□ 0.95
PFN1-201ENST00000225655 PDE4DQ08499 809 aa20.96■□□□□ 0.95
PFN1-201ENST00000225655 ITGA7Q13683 1181 aa20.96■□□□□ 0.95
PFN1-201ENST00000225655 KRT32Q14532 448 aa20.96■□□□□ 0.95
PFN1-201ENST00000225655 ZNF697Q5TEC3 545 aa20.96■□□□□ 0.95
PFN1-201ENST00000225655 CREB3L3Q68CJ9 461 aa20.96■□□□□ 0.95
PFN1-201ENST00000225655 UPF2Q9HAU5 1272 aaKnown RBP20.96■□□□□ 0.95
PFN1-201ENST00000225655 ABCB11O95342 1321 aa20.96■□□□□ 0.95
PFN1-201ENST00000225655 B4DLN1 442 aa20.95■□□□□ 0.94
PFN1-201ENST00000225655 SLC27A2O14975 620 aa20.95■□□□□ 0.94
PFN1-201ENST00000225655 MRPL12P52815 198 aaKnown RBP20.95■□□□□ 0.94
PFN1-201ENST00000225655 IFIT1BQ5T764 474 aaKnown RBP20.95■□□□□ 0.94
PFN1-201ENST00000225655 GRIN2DO15399 1336 aa20.95■□□□□ 0.94
PFN1-201ENST00000225655 PPIGQ13427 754 aaKnown RBP eCLIP20.94■□□□□ 0.943e-8■□□□□ 8.9
PFN1-201ENST00000225655 NECTIN1Q15223 517 aa20.94■□□□□ 0.94
PFN1-201ENST00000225655 SEC23AQ15436 765 aa20.94■□□□□ 0.94
PFN1-201ENST00000225655 C8orf34Q49A92 452 aa20.94■□□□□ 0.94
PFN1-201ENST00000225655 SLC17A8Q8NDX2 589 aa20.94■□□□□ 0.94
PFN1-201ENST00000225655 NCOA7Q8NI08 942 aa20.94■□□□□ 0.94
PFN1-201ENST00000225655 GUCD1Q96NT3 240 aa20.94■□□□□ 0.94
PFN1-201ENST00000225655 COL6A3P12111 3177 aa20.94■□□□□ 0.94
PFN1-201ENST00000225655 NKRFO15226 690 aaKnown RBP eCLIP20.93■□□□□ 0.942e-13■■□□□ 13.2
PFN1-201ENST00000225655 CPT1AP50416 773 aa20.93■□□□□ 0.94
PFN1-201ENST00000225655 QRICH1Q2TAL8 776 aa20.93■□□□□ 0.94
PFN1-201ENST00000225655 CYB5R4Q7L1T6 521 aa20.93■□□□□ 0.94
PFN1-201ENST00000225655 TMEM199Q8N511 208 aa20.93■□□□□ 0.94
PFN1-201ENST00000225655 SCFD2Q8WU76 684 aa20.93■□□□□ 0.94
PFN1-201ENST00000225655 JMJD4Q9H9V9 463 aa20.93■□□□□ 0.94
PFN1-201ENST00000225655 LAMA2P24043 3122 aaKnown RBP20.93■□□□□ 0.94
PFN1-201ENST00000225655 E7EWF7 191 aa20.92■□□□□ 0.94
PFN1-201ENST00000225655 DHX16O60231 1041 aaKnown RBP20.92■□□□□ 0.94
PFN1-201ENST00000225655 HSPA4P34932 840 aa20.92■□□□□ 0.94
PFN1-201ENST00000225655 PPP2R5BQ15173 497 aa20.92■□□□□ 0.94
PFN1-201ENST00000225655 FBXO11Q86XK2 927 aa20.92■□□□□ 0.94
PFN1-201ENST00000225655 MCF2L2Q86YR7 1114 aa20.92■□□□□ 0.94
PFN1-201ENST00000225655 FAM161BQ96MY7 647 aa20.92■□□□□ 0.94
PFN1-201ENST00000225655 USP26Q9BXU7 913 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms