RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 SLFN14P0C7P3 912 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 SRGAP2BP0DMP2 458 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 PDIA3P30101 505 aaKnown RBP4.82□□□□□ -1.64
CHD9-201ENST00000219084 ALDH1B1P30837 517 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 SLC1A4P43007 532 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 MUM1L1Q5H9M0 696 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 PCGF5Q86SE9 256 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 BCAS4Q8TDM0 211 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 SDCCAG3Q96C92 435 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 NRBF2Q96F24 287 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 AATFQ9NY61 560 aaKnown RBP eCLIP4.82□□□□□ -1.64
CHD9-201ENST00000219084 PCDHA4Q9UN74 947 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 MYH7P12883 1935 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 TNFAIP1Q13829 316 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 NBPF20Q3BBV1 942 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 NLRX1Q86UT6 975 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 LRRC8CQ8TDW0 803 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 SUCLG2Q96I99 432 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 EPSTI1Q96J88 318 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 PDE11AQ9HCR9 933 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 PICK1Q9NRD5 415 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 DDX25Q9UHL0 483 aaKnown RBP4.82□□□□□ -1.64
CHD9-201ENST00000219084 SRPRBQ9Y5M8 271 aaKnown RBP4.82□□□□□ -1.64
CHD9-201ENST00000219084 MYH3P11055 1940 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 SLIT1O75093 1534 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 SKIP12755 728 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 POLA2Q14181 598 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 DBN1Q16643 649 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 JPH2Q9BR39 696 aaPredicted RBP4.82□□□□□ -1.64
CHD9-201ENST00000219084 CCDC68Q9H2F9 335 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 TMEM206Q9H813 350 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 TACC3Q9Y6A5 838 aa4.82□□□□□ -1.64
CHD9-201ENST00000219084 CFAP73A6NFT4 308 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 MMP1P03956 469 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 SCRN1Q12765 414 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 NNTQ13423 1086 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 CHST3Q7LGC8 479 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 MAP7D3Q8IWC1 876 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 SERPINI1Q99574 410 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 TRIM15Q9C019 465 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 MRPL11Q9Y3B7 192 aaKnown RBP4.81□□□□□ -1.64
CHD9-201ENST00000219084 KCNK3O14649 394 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 SURF1Q15526 300 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 GNPTABQ3T906 1256 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 PLA2G4DQ86XP0 818 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 RHOT2Q8IXI1 618 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 KIRREL3Q8IZU9 778 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 DBNDD2Q9BQY9 259 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 TUBGCP2Q9BSJ2 902 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 CACYBPQ9HB71 228 aaKnown RBP4.81□□□□□ -1.64
CHD9-201ENST00000219084 MRPL47Q9HD33 250 aaKnown RBP4.81□□□□□ -1.64
CHD9-201ENST00000219084 NDE1Q9NXR1 346 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 KIF1AQ12756 1690 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 MYOM1P52179 1685 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 GAS7O60861 476 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 CHRM1P11229 460 aaPredicted RBP4.81□□□□□ -1.64
CHD9-201ENST00000219084 SLC12A2P55011 1212 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 MFAP3P55082 362 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 FKBP3Q00688 224 aaKnown RBP4.81□□□□□ -1.64
CHD9-201ENST00000219084 SLC4A8Q2Y0W8 1093 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 GPBP1Q86WP2 473 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 PALM2Q8IXS6 379 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 KCTD17Q8N5Z5 321 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 MIGA1Q8NAN2 632 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 PARP3Q9Y6F1 533 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 IQSEC2Q5JU85 1478 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 SMIM23A6NLE4 172 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 RASGRF2O14827 1237 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 ADKP55263 362 aaKnown RBP4.81□□□□□ -1.64
CHD9-201ENST00000219084 EXOC3L4Q17RC7 722 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 PNMA8AQ86V59 439 aaPredicted RBP4.81□□□□□ -1.64
CHD9-201ENST00000219084 IFNL3Q8IZI9 196 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 ARMT1Q9H993 441 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 NCOA5Q9HCD5 579 aaKnown RBP4.81□□□□□ -1.64
CHD9-201ENST00000219084 RIPOR2Q9Y4F9 1068 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 WDR17Q8IZU2 1322 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.81□□□□□ -1.64
CHD9-201ENST00000219084 MIF4GDA9UHW6 222 aaKnown RBP4.81□□□□□ -1.64
CHD9-201ENST00000219084 H2AFZP0C0S5 128 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 TCIRG1Q13488 830 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 H2AFVQ71UI9 128 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 C3orf20Q8ND61 904 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 STAG1Q8WVM7 1258 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 SYMPKQ92797 1274 aaKnown RBP4.81□□□□□ -1.64
CHD9-201ENST00000219084 PPANQ9NQ55 473 aaKnown RBP4.81□□□□□ -1.64
CHD9-201ENST00000219084 ORC6Q9Y5N6 252 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 FER1L4A9Z1Z3 1794 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 KIDINS220Q9ULH0 1771 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 SMCO2A6NFE2 343 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 PRPF3O43395 683 aaKnown RBP4.81□□□□□ -1.64
CHD9-201ENST00000219084 TAF5LO75529 589 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 SCP2P22307 547 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 ADCY8P40145 1251 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 TSGA10IPQ3SY00 556 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 MMS22LQ6ZRQ5 1243 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 CCDC124Q96CT7 223 aaKnown RBP4.81□□□□□ -1.64
CHD9-201ENST00000219084 DTNBP1Q96EV8 351 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 CNOT6LQ96LI5 555 aaKnown RBP4.81□□□□□ -1.64
CHD9-201ENST00000219084 CCDC17Q96LX7 622 aa4.81□□□□□ -1.64
CHD9-201ENST00000219084 USP28Q96RU2 1077 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms