RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.61■□□□□ 0.73
VRK1-201ENST00000216639 MTRQ99707 1265 aa19.61■□□□□ 0.73
VRK1-201ENST00000216639 ANO3Q9BYT9 981 aa19.61■□□□□ 0.73
VRK1-201ENST00000216639 GINM1Q9NU53 330 aa19.61■□□□□ 0.73
VRK1-201ENST00000216639 KBTBD4Q9NVX7 518 aa19.61■□□□□ 0.73
VRK1-201ENST00000216639 GJA3Q9Y6H8 435 aa19.61■□□□□ 0.73
VRK1-201ENST00000216639 SHTN1A0MZ66 631 aa19.6■□□□□ 0.73
VRK1-201ENST00000216639 USP17L15C9J2P7 530 aa19.6■□□□□ 0.73
VRK1-201ENST00000216639 USP17L13C9JLJ4 530 aa19.6■□□□□ 0.73
VRK1-201ENST00000216639 USP17L11C9JVI0 530 aa19.6■□□□□ 0.73
VRK1-201ENST00000216639 USP17L18D6R9N7 530 aa19.6■□□□□ 0.73
VRK1-201ENST00000216639 USP17L22D6RA61 530 aa19.6■□□□□ 0.73
VRK1-201ENST00000216639 USP17L17D6RBQ6 530 aa19.6■□□□□ 0.73
VRK1-201ENST00000216639 USP17L19D6RCP7 530 aa19.6■□□□□ 0.73
VRK1-201ENST00000216639 USP17L20D6RJB6 530 aa19.6■□□□□ 0.73
VRK1-201ENST00000216639 ATP1A3P13637 1013 aa19.6■□□□□ 0.73
VRK1-201ENST00000216639 PLCG1P19174 1290 aa19.6■□□□□ 0.73
VRK1-201ENST00000216639 CDK11BP21127 795 aaKnown RBP19.6■□□□□ 0.73
VRK1-201ENST00000216639 PTGER2P43116 358 aa19.6■□□□□ 0.73
VRK1-201ENST00000216639 AMPD3Q01432 767 aa19.6■□□□□ 0.73
VRK1-201ENST00000216639 FMR1Q06787 632 aaKnown RBP eCLIP19.6■□□□□ 0.73
VRK1-201ENST00000216639 USP17L24Q0WX57 530 aa19.6■□□□□ 0.73
VRK1-201ENST00000216639 USH1GQ495M9 461 aa19.6■□□□□ 0.73
VRK1-201ENST00000216639 FAM83BQ5T0W9 1011 aa19.6■□□□□ 0.73
VRK1-201ENST00000216639 ZNF658Q5TYW1 1059 aaPredicted RBP19.6■□□□□ 0.73
VRK1-201ENST00000216639 USP17L6PQ6QN14 398 aa19.6■□□□□ 0.73
VRK1-201ENST00000216639 FAM160B2Q86V87 743 aa19.6■□□□□ 0.73
VRK1-201ENST00000216639 CDAN1Q8IWY9 1227 aa19.6■□□□□ 0.73
VRK1-201ENST00000216639 CCDC47Q96A33 483 aaKnown RBP19.6■□□□□ 0.73
VRK1-201ENST00000216639 SYNRGQ9UMZ2 1314 aa19.59■□□□□ 0.73
VRK1-201ENST00000216639 SPDYE3A6NKU9 549 aa19.59■□□□□ 0.73
VRK1-201ENST00000216639 PLA2G6O60733 806 aa19.59■□□□□ 0.73
VRK1-201ENST00000216639 CCDC144BQ3MJ40 725 aa19.59■□□□□ 0.73
VRK1-201ENST00000216639 SPATA1Q5VX52 437 aa19.59■□□□□ 0.73
VRK1-201ENST00000216639 MOXD1Q6UVY6 613 aa19.59■□□□□ 0.73
VRK1-201ENST00000216639 FILIP1Q7Z7B0 1213 aa19.59■□□□□ 0.73
VRK1-201ENST00000216639 CDK5RAP3Q96JB5 506 aa19.59■□□□□ 0.73
VRK1-201ENST00000216639 CNOT7Q9UIV1 285 aaKnown RBP19.59■□□□□ 0.73
VRK1-201ENST00000216639 MEIS2O14770 477 aa19.59■□□□□ 0.73
VRK1-201ENST00000216639 EDIL3O43854 480 aa19.59■□□□□ 0.73
VRK1-201ENST00000216639 SNAP25P60880 206 aa19.59■□□□□ 0.73
VRK1-201ENST00000216639 KCNB1Q14721 858 aa19.59■□□□□ 0.73
VRK1-201ENST00000216639 KRT79Q5XKE5 535 aa19.59■□□□□ 0.73
VRK1-201ENST00000216639 KIAA1524Q8TCG1 905 aa19.59■□□□□ 0.73
VRK1-201ENST00000216639 GTPBP4Q9BZE4 634 aaKnown RBP19.59■□□□□ 0.73
VRK1-201ENST00000216639 PSDA5PKW4 1024 aaPredicted RBP19.58■□□□□ 0.72
VRK1-201ENST00000216639 OFD1O75665 1012 aa19.58■□□□□ 0.72
VRK1-201ENST00000216639 NOLC1Q14978 699 aaKnown RBP eCLIP19.58■□□□□ 0.72
VRK1-201ENST00000216639 KLHL10Q6JEL2 608 aa19.58■□□□□ 0.72
VRK1-201ENST00000216639 LRRC8AQ8IWT6 810 aa19.58■□□□□ 0.72
VRK1-201ENST00000216639 TRMT44Q8IYL2 757 aaKnown RBP19.58■□□□□ 0.72
VRK1-201ENST00000216639 PLIN2Q99541 437 aa19.58■□□□□ 0.72
VRK1-201ENST00000216639 FEZ1Q99689 392 aa19.58■□□□□ 0.72
VRK1-201ENST00000216639 STK17AQ9UEE5 414 aa19.58■□□□□ 0.72
VRK1-201ENST00000216639 FEM1BQ9UK73 627 aa19.58■□□□□ 0.72
VRK1-201ENST00000216639 CYP3A7-CYP3A51PA0A087WV96 503 aa19.57■□□□□ 0.72
VRK1-201ENST00000216639 PPP1R3GB7ZBB8 358 aa19.57■□□□□ 0.72
VRK1-201ENST00000216639 ZNF18P17022 549 aa19.57■□□□□ 0.72
VRK1-201ENST00000216639 CYP3A7P24462 503 aa19.57■□□□□ 0.72
VRK1-201ENST00000216639 KIF4BQ2VIQ3 1234 aa19.57■□□□□ 0.72
VRK1-201ENST00000216639 TMC6Q7Z403 805 aa19.57■□□□□ 0.72
VRK1-201ENST00000216639 H7C1D1 291 aa19.56■□□□□ 0.72
VRK1-201ENST00000216639 CD44P16070 742 aaKnown RBP19.56■□□□□ 0.72
VRK1-201ENST00000216639 TPD52L1Q16890 204 aaPredicted RBP19.56■□□□□ 0.72
VRK1-201ENST00000216639 KIAA1755Q5JYT7 1200 aa19.56■□□□□ 0.72
VRK1-201ENST00000216639 SAMD7Q7Z3H4 446 aa19.56■□□□□ 0.72
VRK1-201ENST00000216639 SLFN12Q8IYM2 578 aa19.56■□□□□ 0.72
VRK1-201ENST00000216639 CCDC150Q8NCX0 1101 aa19.56■□□□□ 0.72
VRK1-201ENST00000216639 CACTINQ8WUQ7 758 aaKnown RBP19.56■□□□□ 0.72
VRK1-201ENST00000216639 HOOK2Q96ED9 719 aa19.56■□□□□ 0.72
VRK1-201ENST00000216639 TEPSINQ96N21 525 aa19.56■□□□□ 0.72
VRK1-201ENST00000216639 MMTAG2Q9BU76 263 aaKnown RBP19.56■□□□□ 0.72
VRK1-201ENST00000216639 RANBP17Q9H2T7 1088 aaKnown RBP19.56■□□□□ 0.72
VRK1-201ENST00000216639 HACL1Q9UJ83 578 aa19.56■□□□□ 0.72
VRK1-201ENST00000216639 PCDHA12Q9UN75 941 aa19.56■□□□□ 0.72
VRK1-201ENST00000216639 PHF20L1A8MW92 1017 aa19.56■□□□□ 0.72
VRK1-201ENST00000216639 PIK3CDO00329 1044 aa19.56■□□□□ 0.72
VRK1-201ENST00000216639 NRDCO43847 1150 aa19.56■□□□□ 0.72
VRK1-201ENST00000216639 EGFRP00533 1210 aa19.56■□□□□ 0.72
VRK1-201ENST00000216639 ARHGAP4P98171 946 aa19.56■□□□□ 0.72
VRK1-201ENST00000216639 STIM1Q13586 685 aa19.56■□□□□ 0.72
VRK1-201ENST00000216639 ZYXQ15942 572 aaKnown RBP19.56■□□□□ 0.72
VRK1-201ENST00000216639 TBC1D10BQ4KMP7 808 aaPredicted RBP19.56■□□□□ 0.72
VRK1-201ENST00000216639 SMYD4Q8IYR2 804 aaPredicted RBP19.56■□□□□ 0.72
VRK1-201ENST00000216639 UPF1Q92900 1129 aaKnown RBP eCLIP19.56■□□□□ 0.72
VRK1-201ENST00000216639 KIFC2Q96AC6 838 aa19.56■□□□□ 0.72
VRK1-201ENST00000216639 C7orf25Q9BPX7 421 aa19.56■□□□□ 0.72
VRK1-201ENST00000216639 LRRC27Q9C0I9 530 aa19.56■□□□□ 0.72
VRK1-201ENST00000216639 RWDD2AQ9UIY3 292 aa19.56■□□□□ 0.72
VRK1-201ENST00000216639 PYCARDQ9ULZ3 195 aa19.56■□□□□ 0.72
VRK1-201ENST00000216639 MYH7BA7E2Y1 1941 aa19.55■□□□□ 0.72
VRK1-201ENST00000216639 SLC26A4O43511 780 aa19.55■□□□□ 0.72
VRK1-201ENST00000216639 CTNND1O60716 968 aaKnown RBP19.55■□□□□ 0.72
VRK1-201ENST00000216639 PAK1Q13153 545 aa19.55■□□□□ 0.72
VRK1-201ENST00000216639 DCAF15Q66K64 600 aa19.55■□□□□ 0.72
VRK1-201ENST00000216639 SV2BQ7L1I2 683 aa19.55■□□□□ 0.72
VRK1-201ENST00000216639 SNX29Q8TEQ0 813 aa19.55■□□□□ 0.72
VRK1-201ENST00000216639 HAS1Q92839 578 aa19.55■□□□□ 0.72
VRK1-201ENST00000216639 MBOAT7Q96N66 472 aa19.55■□□□□ 0.72
VRK1-201ENST00000216639 ZNF341Q9BYN7 854 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms