RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 CLRN2A0PK11 232 aa8.96□□□□□ -0.97
HMGXB4-201ENST00000216106 KCNJ18B7U540 433 aa8.96□□□□□ -0.97
HMGXB4-201ENST00000216106 N4BP3O15049 544 aa8.96□□□□□ -0.97
HMGXB4-201ENST00000216106 RAD17O75943 681 aa8.96□□□□□ -0.97
HMGXB4-201ENST00000216106 GH2P01242 217 aa8.96□□□□□ -0.97
HMGXB4-201ENST00000216106 PBX1P40424 430 aa8.96□□□□□ -0.97
HMGXB4-201ENST00000216106 MRPL12P52815 198 aaKnown RBP8.96□□□□□ -0.97
HMGXB4-201ENST00000216106 RBL2Q08999 1139 aa8.96□□□□□ -0.97
HMGXB4-201ENST00000216106 KCNJ12Q14500 433 aa8.96□□□□□ -0.97
HMGXB4-201ENST00000216106 TCP11X2Q5H9J9 407 aa8.96□□□□□ -0.97
HMGXB4-201ENST00000216106 SUPT20HQ8NEM7 779 aa8.96□□□□□ -0.97
HMGXB4-201ENST00000216106 DCAF4Q8WV16 495 aa8.96□□□□□ -0.97
HMGXB4-201ENST00000216106 MAGEF1Q9HAY2 307 aa8.96□□□□□ -0.97
HMGXB4-201ENST00000216106 DDX25Q9UHL0 483 aaKnown RBP8.96□□□□□ -0.97
HMGXB4-201ENST00000216106 PCDHA1Q9Y5I3 950 aa8.96□□□□□ -0.97
HMGXB4-201ENST00000216106 ATRNL1Q5VV63 1379 aa8.96□□□□□ -0.97
HMGXB4-201ENST00000216106 TCP10L2B9ZVM9 353 aa8.96□□□□□ -0.97
HMGXB4-201ENST00000216106 AKR1B15C9JRZ8 316 aaPredicted RBP8.96□□□□□ -0.97
HMGXB4-201ENST00000216106 F5H6K3 240 aa8.96□□□□□ -0.97
HMGXB4-201ENST00000216106 CTIFO43310 598 aaKnown RBP8.96□□□□□ -0.97
HMGXB4-201ENST00000216106 RRP9O43818 475 aaKnown RBP8.96□□□□□ -0.97
HMGXB4-201ENST00000216106 NPM3O75607 178 aaKnown RBP8.96□□□□□ -0.97
HMGXB4-201ENST00000216106 FXR2P51116 673 aaKnown RBP eCLIP8.96□□□□□ -0.97
HMGXB4-201ENST00000216106 KLRC3Q07444 240 aa8.96□□□□□ -0.97
HMGXB4-201ENST00000216106 PDE4DQ08499 809 aa8.96□□□□□ -0.97
HMGXB4-201ENST00000216106 IKQ13123 557 aaPredicted RBP8.96□□□□□ -0.97
HMGXB4-201ENST00000216106 GRB10Q13322 594 aa8.96□□□□□ -0.97
HMGXB4-201ENST00000216106 CC2D2BQ6DHV5 1058 aa8.96□□□□□ -0.97
HMGXB4-201ENST00000216106 GIMAP8Q8ND71 665 aaPredicted RBP8.96□□□□□ -0.97
HMGXB4-201ENST00000216106 EEF2KMTQ96G04 330 aa8.96□□□□□ -0.97
HMGXB4-201ENST00000216106 KIF2AO00139 706 aaPredicted RBP8.96□□□□□ -0.98
HMGXB4-201ENST00000216106 STX10O60499 249 aa8.96□□□□□ -0.98
HMGXB4-201ENST00000216106 STIM1Q13586 685 aa8.96□□□□□ -0.98
HMGXB4-201ENST00000216106 RRP1BQ14684 758 aaKnown RBP8.96□□□□□ -0.98
HMGXB4-201ENST00000216106 TOGARAM2Q6ZUX3 1019 aa8.96□□□□□ -0.98
HMGXB4-201ENST00000216106 PPFIBP1Q86W92 1011 aa8.96□□□□□ -0.98
HMGXB4-201ENST00000216106 CDK5RAP3Q96JB5 506 aa8.96□□□□□ -0.98
HMGXB4-201ENST00000216106 EXOC1Q9NV70 894 aa8.96□□□□□ -0.98
HMGXB4-201ENST00000216106 LIMA1Q9UHB6 759 aaKnown RBP8.96□□□□□ -0.98
HMGXB4-201ENST00000216106 COL4A5P29400 1685 aa8.96□□□□□ -0.98
HMGXB4-201ENST00000216106 NDUFB10O96000 172 aa8.96□□□□□ -0.98
HMGXB4-201ENST00000216106 FCER1AP12319 257 aa8.96□□□□□ -0.98
HMGXB4-201ENST00000216106 TAL1P17542 331 aaPredicted RBP8.96□□□□□ -0.98
HMGXB4-201ENST00000216106 COPB1P53618 953 aaKnown RBP8.96□□□□□ -0.98
HMGXB4-201ENST00000216106 PPP4R3AQ6IN85 833 aa8.96□□□□□ -0.98
HMGXB4-201ENST00000216106 TTLL6Q8N841 843 aa8.96□□□□□ -0.98
HMGXB4-201ENST00000216106 SNX29Q8TEQ0 813 aa8.96□□□□□ -0.98
HMGXB4-201ENST00000216106 HPS3Q969F9 1004 aa8.96□□□□□ -0.98
HMGXB4-201ENST00000216106 TRIM47Q96LD4 638 aa8.96□□□□□ -0.98
HMGXB4-201ENST00000216106 NUDT12Q9BQG2 462 aa8.96□□□□□ -0.98
HMGXB4-201ENST00000216106 ZNF277Q9NRM2 450 aaPredicted RBP8.96□□□□□ -0.98
HMGXB4-201ENST00000216106 PPP2R2CQ9Y2T4 447 aa8.96□□□□□ -0.98
HMGXB4-201ENST00000216106 ZBTB12Q9Y330 459 aaPredicted RBP8.96□□□□□ -0.98
HMGXB4-201ENST00000216106 PSMA7O14818 248 aa8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 CCP110O43303 1012 aa8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 ENTPD3O75355 529 aa8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 GYPCP04921 128 aa8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 CASP14P31944 242 aa8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 SPAG1Q07617 926 aa8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 STK4Q13043 487 aa8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 MCM6Q14566 821 aa8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 USH1GQ495M9 461 aa8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 RBM26Q5T8P6 1007 aaKnown RBP8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 IRF2BP1Q8IU81 584 aa8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 REXO1L1PQ8IX06 675 aa8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 SPICE1Q8N0Z3 855 aa8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 ANKRD20A12PQ8NF67 263 aa8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 PNMA5Q96PV4 448 aa8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 C7orf25Q9BPX7 421 aa8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 DESI2Q9BSY9 194 aa8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 RAB34Q9BZG1 259 aa8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 BLOC1S4Q9NUP1 217 aa8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 SOWAHDA6NJG2 315 aa8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 PSMD14O00487 310 aa8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 MARCH6O60337 910 aa8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 NAA30Q147X3 362 aaPredicted RBP8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 MTF1Q14872 753 aa8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 CCDC93Q567U6 631 aa8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 LARGE2Q8N3Y3 721 aa8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 LARP4BQ92615 738 aaKnown RBP8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 HAS1Q92839 578 aa8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 ARID3AQ99856 593 aa8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 SPDYE2BA6NHP3 402 aa8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 LRRC10BA6NIK2 292 aa8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 H7C1D1 291 aa8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 MFAP3LO75121 409 aa8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 SPDYE6P0CI01 402 aa8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 FXR1P51114 621 aaKnown RBP eCLIP8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 AMPD3Q01432 767 aa8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 RSBN1LQ6PCB5 846 aaPredicted RBP8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 SV2BQ7L1I2 683 aa8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 FCHSD1Q86WN1 690 aa8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 CCDC47Q96A33 483 aaKnown RBP8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 SRRTQ9BXP5 876 aaKnown RBP8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 TMOD2Q9NZR1 351 aa8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 ATF5Q9Y2D1 282 aaPredicted RBP8.95□□□□□ -0.98
HMGXB4-201ENST00000216106 SMCHD1A6NHR9 2005 aa8.94□□□□□ -0.98
HMGXB4-201ENST00000216106 A0A1W2PRG0 241 aa8.94□□□□□ -0.98
HMGXB4-201ENST00000216106 PES1O00541 588 aaKnown RBP8.94□□□□□ -0.98
HMGXB4-201ENST00000216106 ZSCAN12O43309 604 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms