RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 SEC31AO94979 1220 aaKnown RBP13.44□□□□□ -0.26
CHPF2-201ENST00000035307 MRPS25P82663 173 aaKnown RBP13.44□□□□□ -0.26
CHPF2-201ENST00000035307 SHC4Q6S5L8 630 aa13.44□□□□□ -0.26
CHPF2-201ENST00000035307 AFDNP55196 1824 aaKnown RBP13.44□□□□□ -0.26
CHPF2-201ENST00000035307 FAM208AQ9UK61 1670 aaKnown RBP13.44□□□□□ -0.26
CHPF2-201ENST00000035307 POTEMA6NI47 508 aa13.43□□□□□ -0.26
CHPF2-201ENST00000035307 TMEM110-MUSTN1A8MSY1 372 aa13.43□□□□□ -0.26
CHPF2-201ENST00000035307 NF2P35240 595 aa13.43□□□□□ -0.26
CHPF2-201ENST00000035307 DGKZQ13574 1117 aa13.43□□□□□ -0.26
CHPF2-201ENST00000035307 TYW1BQ6NUM6 668 aa13.43□□□□□ -0.26
CHPF2-201ENST00000035307 DPY19L2Q6NUT2 758 aa13.43□□□□□ -0.26
CHPF2-201ENST00000035307 CTNNBL1Q8WYA6 563 aaPredicted RBP13.43□□□□□ -0.26
CHPF2-201ENST00000035307 FERMT2Q96AC1 680 aa13.43□□□□□ -0.26
CHPF2-201ENST00000035307 ALS2CR12Q96Q35 445 aa13.43□□□□□ -0.26
CHPF2-201ENST00000035307 SOWAHDA6NJG2 315 aa13.43□□□□□ -0.26
CHPF2-201ENST00000035307 KCNJ18B7U540 433 aa13.43□□□□□ -0.26
CHPF2-201ENST00000035307 PRPF3O43395 683 aaKnown RBP13.43□□□□□ -0.26
CHPF2-201ENST00000035307 KCNJ12Q14500 433 aa13.43□□□□□ -0.26
CHPF2-201ENST00000035307 NEK11Q8NG66 645 aa13.43□□□□□ -0.26
CHPF2-201ENST00000035307 ZKSCAN4Q969J2 545 aaPredicted RBP13.43□□□□□ -0.26
CHPF2-201ENST00000035307 PYM1Q9BRP8 204 aaKnown RBP13.43□□□□□ -0.26
CHPF2-201ENST00000035307 IL17RBQ9NRM6 502 aa13.43□□□□□ -0.26
CHPF2-201ENST00000035307 MTMR4Q9NYA4 1195 aa13.43□□□□□ -0.26
CHPF2-201ENST00000035307 KRT86O43790 486 aa13.43□□□□□ -0.26
CHPF2-201ENST00000035307 DDNO94850 711 aaPredicted RBP13.43□□□□□ -0.26
CHPF2-201ENST00000035307 MORC3Q14149 939 aa13.43□□□□□ -0.26
CHPF2-201ENST00000035307 NEK8Q86SG6 692 aa13.43□□□□□ -0.26
CHPF2-201ENST00000035307 ADGRF4Q8IZF3 695 aa13.43□□□□□ -0.26
CHPF2-201ENST00000035307 ACRBPQ8NEB7 543 aa13.43□□□□□ -0.26
CHPF2-201ENST00000035307 NLGN2Q8NFZ4 835 aa13.43□□□□□ -0.26
CHPF2-201ENST00000035307 NEDD1Q8NHV4 660 aa13.43□□□□□ -0.26
CHPF2-201ENST00000035307 DCPSQ96C86 337 aaKnown RBP13.43□□□□□ -0.26
CHPF2-201ENST00000035307 IMPACTQ9P2X3 320 aa13.43□□□□□ -0.26
CHPF2-201ENST00000035307 ZNF70Q9UC06 446 aaPredicted RBP13.43□□□□□ -0.26
CHPF2-201ENST00000035307 ZMYND10O75800 440 aa13.42□□□□□ -0.26
CHPF2-201ENST00000035307 EARS2Q5JPH6 523 aaKnown RBP13.42□□□□□ -0.26
CHPF2-201ENST00000035307 RSBN1LQ6PCB5 846 aaPredicted RBP13.42□□□□□ -0.26
CHPF2-201ENST00000035307 MAATS1Q7Z4T9 603 aa13.42□□□□□ -0.26
CHPF2-201ENST00000035307 CWC15Q9P013 229 aaKnown RBP13.42□□□□□ -0.26
CHPF2-201ENST00000035307 TDP2O95551 362 aa13.42□□□□□ -0.26
CHPF2-201ENST00000035307 TNFAIP1Q13829 316 aa13.42□□□□□ -0.26
CHPF2-201ENST00000035307 SCLT1Q96NL6 688 aa13.42□□□□□ -0.26
CHPF2-201ENST00000035307 RAVER2Q9HCJ3 691 aaKnown RBP13.42□□□□□ -0.26
CHPF2-201ENST00000035307 MYCP01106 439 aaPredicted RBP13.42□□□□□ -0.26
CHPF2-201ENST00000035307 HARSP12081 509 aaKnown RBP13.42□□□□□ -0.26
CHPF2-201ENST00000035307 EIF2AK2P19525 551 aaKnown RBP13.42□□□□□ -0.26
CHPF2-201ENST00000035307 QRICH1Q2TAL8 776 aa13.42□□□□□ -0.26
CHPF2-201ENST00000035307 IQCEQ6IPM2 695 aa13.42□□□□□ -0.26
CHPF2-201ENST00000035307 GBP3Q9H0R5 595 aa13.42□□□□□ -0.26
CHPF2-201ENST00000035307 GGA3Q9NZ52 723 aa13.42□□□□□ -0.26
CHPF2-201ENST00000035307 TMOD4Q9NZQ9 345 aa13.42□□□□□ -0.26
CHPF2-201ENST00000035307 PCDHA12Q9UN75 941 aa13.42□□□□□ -0.26
CHPF2-201ENST00000035307 KRT25Q7Z3Z0 450 aa13.41□□□□□ -0.26
CHPF2-201ENST00000035307 CCDC17Q96LX7 622 aa13.41□□□□□ -0.26
CHPF2-201ENST00000035307 PCDHA4Q9UN74 947 aa13.41□□□□□ -0.26
CHPF2-201ENST00000035307 TRIM49BA6NDI0 452 aa13.41□□□□□ -0.26
CHPF2-201ENST00000035307 GJC1P36383 396 aa13.41□□□□□ -0.26
CHPF2-201ENST00000035307 RRAGAQ7L523 313 aa13.41□□□□□ -0.26
CHPF2-201ENST00000035307 DHX36Q9H2U1 1008 aaKnown RBP13.41□□□□□ -0.26
CHPF2-201ENST00000035307 RFX7Q2KHR2 1363 aa13.41□□□□□ -0.26
CHPF2-201ENST00000035307 ATP2C2O75185 946 aa13.41□□□□□ -0.26
CHPF2-201ENST00000035307 RPN1P04843 607 aaKnown RBP13.41□□□□□ -0.26
CHPF2-201ENST00000035307 HOXA10P31260 410 aaPredicted RBP13.41□□□□□ -0.26
CHPF2-201ENST00000035307 RBL2Q08999 1139 aa13.41□□□□□ -0.26
CHPF2-201ENST00000035307 APOBEC3HQ6NTF7 200 aaKnown RBP13.41□□□□□ -0.26
CHPF2-201ENST00000035307 IRX2Q9BZI1 471 aaPredicted RBP13.41□□□□□ -0.26
CHPF2-201ENST00000035307 CSADQ9Y600 493 aa13.41□□□□□ -0.26
CHPF2-201ENST00000035307 B4DLN1 442 aa13.4□□□□□ -0.26
CHPF2-201ENST00000035307 NDUFB10O96000 172 aa13.4□□□□□ -0.26
CHPF2-201ENST00000035307 HMGCS2P54868 508 aa13.4□□□□□ -0.26
CHPF2-201ENST00000035307 VPS36Q86VN1 386 aa13.4□□□□□ -0.26
CHPF2-201ENST00000035307 CERS3Q8IU89 383 aa13.4□□□□□ -0.26
CHPF2-201ENST00000035307 HPS3Q969F9 1004 aa13.4□□□□□ -0.26
CHPF2-201ENST00000035307 FOXP1Q9H334 677 aaPredicted RBP13.4□□□□□ -0.26
CHPF2-201ENST00000035307 FAM217BQ9NTX9 383 aaPredicted RBP13.4□□□□□ -0.26
CHPF2-201ENST00000035307 DDX25Q9UHL0 483 aaKnown RBP13.4□□□□□ -0.26
CHPF2-201ENST00000035307 C5P01031 1676 aa13.4□□□□□ -0.26
CHPF2-201ENST00000035307 CACNA1FO60840 1977 aa13.4□□□□□ -0.26
CHPF2-201ENST00000035307 SMIM23A6NLE4 172 aa13.4□□□□□ -0.26
CHPF2-201ENST00000035307 ORC4O43929 436 aa13.4□□□□□ -0.26
CHPF2-201ENST00000035307 TACC1O75410 805 aa13.4□□□□□ -0.26
CHPF2-201ENST00000035307 INPP5BP32019 993 aa13.4□□□□□ -0.26
CHPF2-201ENST00000035307 PABPC4Q13310 644 aaKnown RBP eCLIP13.4□□□□□ -0.26
CHPF2-201ENST00000035307 STYK1Q6J9G0 422 aa13.4□□□□□ -0.26
CHPF2-201ENST00000035307 FOXP4Q8IVH2 680 aaPredicted RBP13.4□□□□□ -0.26
CHPF2-201ENST00000035307 SMCR8Q8TEV9 937 aaPredicted RBP13.4□□□□□ -0.26
CHPF2-201ENST00000035307 AMNQ9BXJ7 453 aa13.4□□□□□ -0.26
CHPF2-201ENST00000035307 PLEKHG2Q9H7P9 1386 aa13.4□□□□□ -0.26
CHPF2-201ENST00000035307 TEX33O43247 280 aa13.4□□□□□ -0.26
CHPF2-201ENST00000035307 PPP6R2O75170 966 aa13.4□□□□□ -0.26
CHPF2-201ENST00000035307 STAT3P40763 770 aa13.4□□□□□ -0.26
CHPF2-201ENST00000035307 STAT2P52630 851 aa13.4□□□□□ -0.26
CHPF2-201ENST00000035307 ERMNQ8TAM6 284 aa13.4□□□□□ -0.26
CHPF2-201ENST00000035307 KCNB2Q92953 911 aa13.4□□□□□ -0.26
CHPF2-201ENST00000035307 SCN11AQ9UI33 1791 aa13.4□□□□□ -0.26
CHPF2-201ENST00000035307 UTRNP46939 3433 aa13.4□□□□□ -0.26
CHPF2-201ENST00000035307 ASTN2O75129 1339 aaPredicted RBP13.4□□□□□ -0.27
CHPF2-201ENST00000035307 PARP4Q9UKK3 1724 aaKnown RBP13.4□□□□□ -0.27
CHPF2-201ENST00000035307 SFI1A8K8P3 1242 aa13.39□□□□□ -0.27
CHPF2-201ENST00000035307 IRX3P78415 501 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms