RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 GNPTABQ3T906 1256 aa13.4□□□□□ -0.26
TSPAN9-201ENST00000011898 STXBP4Q6ZWJ1 553 aa13.4□□□□□ -0.26
TSPAN9-201ENST00000011898 STMN2Q93045 179 aa13.4□□□□□ -0.26
TSPAN9-201ENST00000011898 CCDC51Q96ER9 411 aa13.4□□□□□ -0.26
TSPAN9-201ENST00000011898 KCNK9Q9NPC2 374 aa13.4□□□□□ -0.26
TSPAN9-201ENST00000011898 LRWD1Q9UFC0 647 aa13.4□□□□□ -0.26
TSPAN9-201ENST00000011898 FMNL1O95466 1100 aaPredicted RBP13.4□□□□□ -0.26
TSPAN9-201ENST00000011898 LIFRP42702 1097 aa13.4□□□□□ -0.26
TSPAN9-201ENST00000011898 KIAA0753Q2KHM9 967 aa13.4□□□□□ -0.26
TSPAN9-201ENST00000011898 FBXW10Q5XX13 1052 aa13.4□□□□□ -0.26
TSPAN9-201ENST00000011898 DYMQ7RTS9 669 aa13.4□□□□□ -0.26
TSPAN9-201ENST00000011898 VSIG1Q86XK7 387 aa13.4□□□□□ -0.26
TSPAN9-201ENST00000011898 RNF10Q8N5U6 811 aaKnown RBP13.4□□□□□ -0.26
TSPAN9-201ENST00000011898 SELENOOQ9BVL4 669 aa13.4□□□□□ -0.26
TSPAN9-201ENST00000011898 TRIM7Q9C029 511 aa13.4□□□□□ -0.26
TSPAN9-201ENST00000011898 TBC1D9BQ66K14 1250 aa13.4□□□□□ -0.27
TSPAN9-201ENST00000011898 SMYD4Q8IYR2 804 aaPredicted RBP13.4□□□□□ -0.27
TSPAN9-201ENST00000011898 TSC22D3Q99576 134 aa13.4□□□□□ -0.27
TSPAN9-201ENST00000011898 NUP58Q9BVL2 599 aa13.4□□□□□ -0.27
TSPAN9-201ENST00000011898 RNF26Q9BY78 433 aaPredicted RBP13.4□□□□□ -0.27
TSPAN9-201ENST00000011898 GPCPD1Q9NPB8 672 aa13.4□□□□□ -0.27
TSPAN9-201ENST00000011898 PIH1D3Q9NQM4 214 aaKnown RBP13.4□□□□□ -0.27
TSPAN9-201ENST00000011898 KCNJ18B7U540 433 aa13.39□□□□□ -0.27
TSPAN9-201ENST00000011898 MMP1P03956 469 aa13.39□□□□□ -0.27
TSPAN9-201ENST00000011898 SCG2P13521 617 aa13.39□□□□□ -0.27
TSPAN9-201ENST00000011898 ERCC5P28715 1186 aaPredicted RBP13.39□□□□□ -0.27
TSPAN9-201ENST00000011898 ELF1P32519 619 aa13.39□□□□□ -0.27
TSPAN9-201ENST00000011898 MRPL12P52815 198 aaKnown RBP13.39□□□□□ -0.27
TSPAN9-201ENST00000011898 IRX1P78414 480 aaPredicted RBP13.39□□□□□ -0.27
TSPAN9-201ENST00000011898 KCNJ12Q14500 433 aa13.39□□□□□ -0.27
TSPAN9-201ENST00000011898 HIBCHQ6NVY1 386 aaPredicted RBP13.39□□□□□ -0.27
TSPAN9-201ENST00000011898 BLIDQ8IZY5 108 aa13.39□□□□□ -0.27
TSPAN9-201ENST00000011898 GSDMAQ96QA5 445 aa13.39□□□□□ -0.27
TSPAN9-201ENST00000011898 SNAP23O00161 211 aa13.39□□□□□ -0.27
TSPAN9-201ENST00000011898 COBLO75128 1261 aa13.39□□□□□ -0.27
TSPAN9-201ENST00000011898 MORC3Q14149 939 aa13.39□□□□□ -0.27
TSPAN9-201ENST00000011898 MAPKAPK5Q8IW41 473 aa13.39□□□□□ -0.27
TSPAN9-201ENST00000011898 SYNE4Q8N205 404 aa13.39□□□□□ -0.27
TSPAN9-201ENST00000011898 SAMSN1Q9NSI8 373 aaKnown RBP13.39□□□□□ -0.27
TSPAN9-201ENST00000011898 CASP14P31944 242 aa13.39□□□□□ -0.27
TSPAN9-201ENST00000011898 CC2D1AQ6P1N0 951 aaPredicted RBP13.39□□□□□ -0.27
TSPAN9-201ENST00000011898 CABP7Q86V35 215 aa13.39□□□□□ -0.27
TSPAN9-201ENST00000011898 PNMA1Q8ND90 353 aa13.39□□□□□ -0.27
TSPAN9-201ENST00000011898 ZMYND10O75800 440 aa13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 MAGEA1P43355 309 aa13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 RAPGEF1Q13905 1077 aa13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 CASP8Q14790 479 aa13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 SRGAP1Q7Z6B7 1085 aa13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 CCDC63Q8NA47 563 aa13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 TGFBRAP1Q8WUH2 860 aa13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 CTNNBL1Q8WYA6 563 aaPredicted RBP13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 STRBPQ96SI9 672 aaKnown RBP13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 PLA2G12BQ9BX93 195 aa13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 TSGA10Q9BZW7 698 aa13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 PCDHB6Q9Y5E3 794 aa13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 SPDYE3A6NKU9 549 aa13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 RIMBP2O15034 1052 aa13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 CETN2P41208 172 aa13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 INF2Q27J81 1249 aa13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 KRT25Q7Z3Z0 450 aa13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 FCHSD1Q86WN1 690 aa13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 LCORLQ8N3X6 602 aa13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 ABTB1Q969K4 478 aaPredicted RBP13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 NAP1L3Q99457 506 aaPredicted RBP13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 FAM207AQ9NSI2 230 aaPredicted RBP13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 MAN1B1Q9UKM7 699 aa13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 ARFGEF2Q9Y6D5 1785 aa13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 MUM1Q2TAK8 710 aa13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 GKAP1Q5VSY0 366 aaPredicted RBP13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 ENOX1Q8TC92 643 aaKnown RBP13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 SALL3Q9BXA9 1300 aa13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 LUC7L3O95232 432 aaKnown RBP13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 RABL6Q3YEC7 729 aaPredicted RBP13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 SH2D4BQ5SQS7 431 aa13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 SMIM5Q71RC9 77 aa13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 VSTM4Q8IW00 320 aa13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 CCDC65Q8IXS2 484 aa13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 ARHGEF2Q92974 986 aaKnown RBP13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 CCDC97Q96F63 343 aaPredicted RBP13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 KCNF1Q9H3M0 494 aa13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 SAR1BQ9Y6B6 198 aa13.38□□□□□ -0.27
TSPAN9-201ENST00000011898 H7C1D1 291 aa13.37□□□□□ -0.27
TSPAN9-201ENST00000011898 RASGRF1Q13972 1273 aa13.37□□□□□ -0.27
TSPAN9-201ENST00000011898 SLC15A2Q16348 729 aa13.37□□□□□ -0.27
TSPAN9-201ENST00000011898 CCDC84Q86UT8 332 aaPredicted RBP13.37□□□□□ -0.27
TSPAN9-201ENST00000011898 SNX29Q8TEQ0 813 aa13.37□□□□□ -0.27
TSPAN9-201ENST00000011898 GPKOWQ92917 476 aaPredicted RBP eCLIP13.37□□□□□ -0.27
TSPAN9-201ENST00000011898 ARPP21Q9UBL0 812 aaPredicted RBP13.37□□□□□ -0.27
TSPAN9-201ENST00000011898 UFL1O94874 794 aa13.37□□□□□ -0.27
TSPAN9-201ENST00000011898 MAP7Q14244 749 aa13.37□□□□□ -0.27
TSPAN9-201ENST00000011898 ATF5Q9Y2D1 282 aaPredicted RBP13.37□□□□□ -0.27
TSPAN9-201ENST00000011898 SBF2Q86WG5 1849 aa13.37□□□□□ -0.27
TSPAN9-201ENST00000011898 GTPBP6O43824 516 aaPredicted RBP13.37□□□□□ -0.27
TSPAN9-201ENST00000011898 DEFB132Q7Z7B7 95 aa13.37□□□□□ -0.27
TSPAN9-201ENST00000011898 RAB3IL1Q8TBN0 382 aa13.37□□□□□ -0.27
TSPAN9-201ENST00000011898 JDP2Q8WYK2 163 aa13.37□□□□□ -0.27
TSPAN9-201ENST00000011898 BCS1LQ9Y276 419 aa13.37□□□□□ -0.27
TSPAN9-201ENST00000011898 EPN1Q9Y6I3 576 aaPredicted RBP13.37□□□□□ -0.27
TSPAN9-201ENST00000011898 AFDNP55196 1824 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms