RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 MTFR1Q15390 333 aa13.9□□□□□ -0.18
SYPL1-201ENST00000011473 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.9□□□□□ -0.18
SYPL1-201ENST00000011473 FAM133AQ8N9E0 248 aa13.9□□□□□ -0.18
SYPL1-201ENST00000011473 PXYLP1Q8TE99 480 aa13.9□□□□□ -0.18
SYPL1-201ENST00000011473 AIFM3Q96NN9 605 aa13.9□□□□□ -0.18
SYPL1-201ENST00000011473 PRPF3O43395 683 aaKnown RBP13.89□□□□□ -0.19
SYPL1-201ENST00000011473 JAK2O60674 1132 aa13.89□□□□□ -0.19
SYPL1-201ENST00000011473 SCG2P13521 617 aa13.89□□□□□ -0.19
SYPL1-201ENST00000011473 AKAP17AQ02040 695 aaKnown RBP13.89□□□□□ -0.19
SYPL1-201ENST00000011473 PFKFB3Q16875 520 aaPredicted RBP13.89□□□□□ -0.19
SYPL1-201ENST00000011473 PRAMEF19Q5SWL8 479 aa13.89□□□□□ -0.19
SYPL1-201ENST00000011473 USP17L6PQ6QN14 398 aa13.89□□□□□ -0.19
SYPL1-201ENST00000011473 SHISA4Q96DD7 197 aa13.89□□□□□ -0.19
SYPL1-201ENST00000011473 RNF26Q9BY78 433 aaPredicted RBP13.89□□□□□ -0.19
SYPL1-201ENST00000011473 STXBP3O00186 592 aa13.88□□□□□ -0.19
SYPL1-201ENST00000011473 NAPAP54920 295 aa13.88□□□□□ -0.19
SYPL1-201ENST00000011473 SSRP1Q08945 709 aaKnown RBP13.88□□□□□ -0.19
SYPL1-201ENST00000011473 SYTL5Q8TDW5 730 aaPredicted RBP13.88□□□□□ -0.19
SYPL1-201ENST00000011473 SLC5A4Q9NY91 659 aa13.88□□□□□ -0.19
SYPL1-201ENST00000011473 ADAMTS3O15072 1205 aa13.88□□□□□ -0.19
SYPL1-201ENST00000011473 HMGCRP04035 888 aa13.88□□□□□ -0.19
SYPL1-201ENST00000011473 PRKAR2AP13861 404 aaKnown RBP13.88□□□□□ -0.19
SYPL1-201ENST00000011473 CACNB2Q08289 660 aaPredicted RBP13.88□□□□□ -0.19
SYPL1-201ENST00000011473 UBE2SQ16763 222 aa13.88□□□□□ -0.19
SYPL1-201ENST00000011473 CPLX2Q6PUV4 134 aaKnown RBP13.88□□□□□ -0.19
SYPL1-201ENST00000011473 FCHSD1Q86WN1 690 aa13.88□□□□□ -0.19
SYPL1-201ENST00000011473 MCF2L2Q86YR7 1114 aa13.88□□□□□ -0.19
SYPL1-201ENST00000011473 TRIM22Q8IYM9 498 aa13.88□□□□□ -0.19
SYPL1-201ENST00000011473 ABHD8Q96I13 439 aa13.88□□□□□ -0.19
SYPL1-201ENST00000011473 TAAR1Q96RJ0 339 aa13.88□□□□□ -0.19
SYPL1-201ENST00000011473 GJB4Q9NTQ9 266 aa13.88□□□□□ -0.19
SYPL1-201ENST00000011473 BARHL2Q9NY43 387 aa13.88□□□□□ -0.19
SYPL1-201ENST00000011473 VPS54Q9P1Q0 977 aa13.88□□□□□ -0.19
SYPL1-201ENST00000011473 ZNF236Q9UL36 1845 aa13.87□□□□□ -0.19
SYPL1-201ENST00000011473 NSUN7Q8NE18 718 aaKnown RBP13.87□□□□□ -0.19
SYPL1-201ENST00000011473 ZNF333Q96JL9 665 aa13.87□□□□□ -0.19
SYPL1-201ENST00000011473 TINF2Q9BSI4 451 aa13.87□□□□□ -0.19
SYPL1-201ENST00000011473 PSTPIP2Q9H939 334 aa13.87□□□□□ -0.19
SYPL1-201ENST00000011473 GCOM1H8Y6P7 765 aaPredicted RBP13.87□□□□□ -0.19
SYPL1-201ENST00000011473 MEIS2O14770 477 aa13.87□□□□□ -0.19
SYPL1-201ENST00000011473 CDKL5O76039 1030 aa13.87□□□□□ -0.19
SYPL1-201ENST00000011473 POLR2MP0CAP2 368 aa13.87□□□□□ -0.19
SYPL1-201ENST00000011473 HSD17B4P51659 736 aa13.87□□□□□ -0.19
SYPL1-201ENST00000011473 UBXN2AP68543 259 aa13.87□□□□□ -0.19
SYPL1-201ENST00000011473 EEPD1Q7L9B9 569 aa13.87□□□□□ -0.19
SYPL1-201ENST00000011473 RGS22Q8NE09 1264 aa13.87□□□□□ -0.19
SYPL1-201ENST00000011473 ARMC5Q96C12 935 aa13.87□□□□□ -0.19
SYPL1-201ENST00000011473 TMX3Q96JJ7 454 aa13.87□□□□□ -0.19
SYPL1-201ENST00000011473 UNC93B1Q9H1C4 597 aa13.87□□□□□ -0.19
SYPL1-201ENST00000011473 DIS3Q9Y2L1 958 aaKnown RBP13.87□□□□□ -0.19
SYPL1-201ENST00000011473 SNAI1O95863 264 aaPredicted RBP13.86□□□□□ -0.19
SYPL1-201ENST00000011473 IGHA2P01877 340 aa13.86□□□□□ -0.19
SYPL1-201ENST00000011473 FDPSP14324 419 aaKnown RBP13.86□□□□□ -0.19
SYPL1-201ENST00000011473 EIF2AK2P19525 551 aaKnown RBP13.86□□□□□ -0.19
SYPL1-201ENST00000011473 CCND3P30281 292 aaPredicted RBP13.86□□□□□ -0.19
SYPL1-201ENST00000011473 ALDH5A1P51649 535 aaPredicted RBP13.86□□□□□ -0.19
SYPL1-201ENST00000011473 FOSBP53539 338 aa13.86□□□□□ -0.19
SYPL1-201ENST00000011473 TRAF1Q13077 416 aa13.86□□□□□ -0.19
SYPL1-201ENST00000011473 OLFML2BQ68BL8 750 aa13.86□□□□□ -0.19
SYPL1-201ENST00000011473 ARMCX2Q7L311 632 aa13.86□□□□□ -0.19
SYPL1-201ENST00000011473 TRPV1Q8NER1 839 aa13.86□□□□□ -0.19
SYPL1-201ENST00000011473 ZFP91Q96JP5 570 aaPredicted RBP13.86□□□□□ -0.19
SYPL1-201ENST00000011473 RMDN3Q96TC7 470 aa13.86□□□□□ -0.19
SYPL1-201ENST00000011473 SMCO2A6NFE2 343 aa13.85□□□□□ -0.19
SYPL1-201ENST00000011473 DEXIO95424 95 aa13.85□□□□□ -0.19
SYPL1-201ENST00000011473 MFSD14CQ5VZR4 134 aa13.85□□□□□ -0.19
SYPL1-201ENST00000011473 ANO1Q5XXA6 986 aa13.85□□□□□ -0.19
SYPL1-201ENST00000011473 PGBD1Q96JS3 809 aa13.85□□□□□ -0.19
SYPL1-201ENST00000011473 ZSCAN31Q96LW9 406 aaPredicted RBP13.85□□□□□ -0.19
SYPL1-201ENST00000011473 SH2B1Q9NRF2 756 aaPredicted RBP13.85□□□□□ -0.19
SYPL1-201ENST00000011473 ORC3Q9UBD5 711 aaPredicted RBP13.85□□□□□ -0.19
SYPL1-201ENST00000011473 MYH6P13533 1939 aa13.85□□□□□ -0.19
SYPL1-201ENST00000011473 CCDC85CA6NKD9 419 aa13.85□□□□□ -0.19
SYPL1-201ENST00000011473 CCL5P13501 91 aa13.85□□□□□ -0.19
SYPL1-201ENST00000011473 CNGA1P29973 690 aa13.85□□□□□ -0.19
SYPL1-201ENST00000011473 MAP3K21Q5TCX8 1036 aa13.85□□□□□ -0.19
SYPL1-201ENST00000011473 TRMT44Q8IYL2 757 aaKnown RBP13.85□□□□□ -0.19
SYPL1-201ENST00000011473 SMARCC2Q8TAQ2 1214 aa13.85□□□□□ -0.19
SYPL1-201ENST00000011473 RNF208Q9H0X6 261 aa13.85□□□□□ -0.19
SYPL1-201ENST00000011473 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.85□□□□□ -0.19
SYPL1-201ENST00000011473 RBM27Q9P2N5 1060 aaKnown RBP13.85□□□□□ -0.19
SYPL1-201ENST00000011473 ADD3Q9UEY8 706 aaKnown RBP13.85□□□□□ -0.19
SYPL1-201ENST00000011473 ARHGEF16Q5VV41 709 aa13.84□□□□□ -0.19
SYPL1-201ENST00000011473 MAMDC4Q6UXC1 1216 aa13.84□□□□□ -0.19
SYPL1-201ENST00000011473 ZNF467Q7Z7K2 595 aaPredicted RBP13.84□□□□□ -0.19
SYPL1-201ENST00000011473 FBXO16Q8IX29 292 aaPredicted RBP13.84□□□□□ -0.19
SYPL1-201ENST00000011473 IL31RAQ8NI17 732 aa13.84□□□□□ -0.19
SYPL1-201ENST00000011473 CUL5Q93034 780 aa13.84□□□□□ -0.19
SYPL1-201ENST00000011473 TMEM260Q9NX78 707 aa13.84□□□□□ -0.19
SYPL1-201ENST00000011473 ZHX1Q9UKY1 873 aaPredicted RBP13.84□□□□□ -0.19
SYPL1-201ENST00000011473 KCNJ14Q9UNX9 436 aa13.84□□□□□ -0.19
SYPL1-201ENST00000011473 CYBAP13498 195 aa13.84□□□□□ -0.19
SYPL1-201ENST00000011473 PTGS1P23219 599 aa13.84□□□□□ -0.19
SYPL1-201ENST00000011473 ADCY7P51828 1080 aa13.84□□□□□ -0.19
SYPL1-201ENST00000011473 GHRHRQ02643 423 aa13.84□□□□□ -0.19
SYPL1-201ENST00000011473 RASGRP4Q8TDF6 673 aa13.84□□□□□ -0.19
SYPL1-201ENST00000011473 LENG1Q96BZ8 264 aaPredicted RBP13.84□□□□□ -0.19
SYPL1-201ENST00000011473 PXMP2Q9NR77 195 aa13.84□□□□□ -0.19
SYPL1-201ENST00000011473 LCTP09848 1927 aa13.83□□□□□ -0.19
SYPL1-201ENST00000011473 SYNGAP1Q96PV0 1343 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms